RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 TTC27Q6P3X3 843 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 CASC4Q6P4E1 433 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 FBXO38Q6PIJ6 1188 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 NANOGNBQ7Z5D8 188 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 PLA2G4DQ86XP0 818 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 SIX6OS1Q8N1H7 587 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 OMA1Q96E52 524 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 PRRG3Q9BZD7 231 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 GPBP1L1Q9HC44 474 aaPredicted RBP5.17□□□□□ -1.58
CSMD3-201ENST00000297405 CEP72Q9P209 647 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 ADCY6O43306 1168 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 PDHA1P08559 390 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 SDSP20132 328 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 PDE1AP54750 535 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 GMFBP60983 142 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 DHX34Q14147 1143 aaKnown RBP5.17□□□□□ -1.58
CSMD3-201ENST00000297405 PRPSAP1Q14558 356 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 DISC1Q9NRI5 854 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 H3BRJ5 948 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 SOX12O15370 315 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 S100A6P06703 90 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 PAMP19021 973 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 EVA1CP58658 441 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 MMRN1Q13201 1228 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 LRIG3Q6UXM1 1119 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 KRT77Q7Z794 578 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 TRIM59Q8IWR1 403 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 SPATA5Q8NB90 893 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 TTC13Q8NBP0 860 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 DCTPP1Q9H773 170 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.17□□□□□ -1.58
CSMD3-201ENST00000297405 CTNNAL1Q9UBT7 734 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 MED26O95402 600 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 CFAP70Q5T0N1 1121 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 WLSQ5T9L3 541 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 ZNF710Q8N1W2 664 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 ATP6V1E2Q96A05 226 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 GPR101Q96P66 508 aaPredicted RBP5.17□□□□□ -1.58
CSMD3-201ENST00000297405 CDC5LQ99459 802 aaKnown RBP5.17□□□□□ -1.58
CSMD3-201ENST00000297405 MXD3Q9BW11 206 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 SLC24A3Q9HC58 644 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 STX8Q9UNK0 236 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.17□□□□□ -1.58
CSMD3-201ENST00000297405 COMMD3-BMI1R4GMX3 469 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 TRIM24O15164 1050 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 WBP4O75554 376 aaKnown RBP5.17□□□□□ -1.58
CSMD3-201ENST00000297405 UBTFL6P0CB48 400 aaPredicted RBP5.17□□□□□ -1.58
CSMD3-201ENST00000297405 TAC1P20366 129 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 CYP4A11Q02928 519 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 PKN2Q16513 984 aaKnown RBP5.17□□□□□ -1.58
CSMD3-201ENST00000297405 CYP4A22Q5TCH4 519 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 TOGARAM2Q6ZUX3 1019 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 PROM2Q8N271 834 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 XPO6Q96QU8 1125 aaKnown RBP5.17□□□□□ -1.58
CSMD3-201ENST00000297405 POLR2AP24928 1970 aaKnown RBP5.17□□□□□ -1.58
CSMD3-201ENST00000297405 RNF123Q5XPI4 1314 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 POTEFA5A3E0 1075 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 KATNA1O75449 491 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 POTEIP0CG38 1075 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 COG2Q14746 738 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 C6orf10Q5SRN2 563 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 EPM2AIP1Q7L775 607 aaPredicted RBP5.17□□□□□ -1.58
CSMD3-201ENST00000297405 ERAP1Q9NZ08 941 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 SERPINB13Q9UIV8 391 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 FNTAP49354 379 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 SGSM1Q2NKQ1 1148 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 CCDC85AQ96PX6 553 aaPredicted RBP5.17□□□□□ -1.58
CSMD3-201ENST00000297405 PARD3Q8TEW0 1356 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 RNF103-CHMP3A0A140T963 221 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 RAD23BP54727 409 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 PARP10Q53GL7 1025 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 AGBL2Q5U5Z8 902 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 GPR141Q7Z602 305 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 WDR12Q9GZL7 423 aaKnown RBP5.17□□□□□ -1.58
CSMD3-201ENST00000297405 NEUROG2Q9H2A3 272 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 COPG2Q9UBF2 871 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 MTO1Q9Y2Z2 717 aaKnown RBP5.17□□□□□ -1.58
CSMD3-201ENST00000297405 CREBBPQ92793 2442 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 KCNK3O14649 394 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 FKBP6O75344 327 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 POLR3DP05423 398 aaPredicted RBP5.17□□□□□ -1.58
CSMD3-201ENST00000297405 IL12AP29459 219 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 INPP5DQ92835 1189 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 FTOQ9C0B1 505 aaKnown RBP eCLIP5.17□□□□□ -1.58
CSMD3-201ENST00000297405 CCDC162PA2VCL2 907 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 CTIFO43310 598 aaKnown RBP5.17□□□□□ -1.58
CSMD3-201ENST00000297405 PPM1FP49593 454 aaPredicted RBP5.17□□□□□ -1.58
CSMD3-201ENST00000297405 ORC2Q13416 577 aaPredicted RBP5.17□□□□□ -1.58
CSMD3-201ENST00000297405 ALCAMQ13740 583 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 SLC10A5Q5PT55 438 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 C11orf88Q6PI97 169 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 DENND6AQ8IWF6 608 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 NEDD4LQ96PU5 975 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 CCT7Q99832 543 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 XPO4Q9C0E2 1151 aaKnown RBP5.17□□□□□ -1.58
CSMD3-201ENST00000297405 ETNK1Q9HBU6 452 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 ZFATQ9P243 1243 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 BLMP54132 1417 aaPredicted RBP5.17□□□□□ -1.58
CSMD3-201ENST00000297405 NSD3Q9BZ95 1437 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 ZNF233A6NK53 670 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms