RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 UBLCP1Q8WVY7 318 aaPredicted RBP20.88■□□□□ 0.93
TRA2A-201ENST00000297071 PGM2Q96G03 612 aa20.88■□□□□ 0.93
TRA2A-201ENST00000297071 UBA5Q9GZZ9 404 aa20.88■□□□□ 0.93
TRA2A-201ENST00000297071 KCNMB3Q9NPA1 279 aa20.88■□□□□ 0.93
TRA2A-201ENST00000297071 SAP30BPQ9UHR5 308 aaKnown RBP20.88■□□□□ 0.93
TRA2A-201ENST00000297071 AMFRQ9UKV5 643 aa20.88■□□□□ 0.93
TRA2A-201ENST00000297071 TRIM37O94972 964 aa20.88■□□□□ 0.93
TRA2A-201ENST00000297071 RPL13P26373 211 aaKnown RBP20.88■□□□□ 0.93
TRA2A-201ENST00000297071 TNNI2P48788 182 aa20.88■□□□□ 0.93
TRA2A-201ENST00000297071 PTENP60484 403 aa20.88■□□□□ 0.93
TRA2A-201ENST00000297071 DIXDC1Q155Q3 683 aa20.88■□□□□ 0.93
TRA2A-201ENST00000297071 PARP9Q8IXQ6 854 aa20.88■□□□□ 0.93
TRA2A-201ENST00000297071 LINC00116Q8NCU8 138 aa20.88■□□□□ 0.93
TRA2A-201ENST00000297071 CCT6BQ92526 530 aa20.88■□□□□ 0.93
TRA2A-201ENST00000297071 TMEM109Q9BVC6 243 aa20.88■□□□□ 0.93
TRA2A-201ENST00000297071 FGFBP2Q9BYJ0 223 aa20.88■□□□□ 0.93
TRA2A-201ENST00000297071 FAM129AQ9BZQ8 928 aa20.88■□□□□ 0.93
TRA2A-201ENST00000297071 DDX47Q9H0S4 455 aaKnown RBP20.88■□□□□ 0.93
TRA2A-201ENST00000297071 DHX36Q9H2U1 1008 aaKnown RBP20.88■□□□□ 0.93
TRA2A-201ENST00000297071 CCDC134Q9H6E4 229 aa20.88■□□□□ 0.93
TRA2A-201ENST00000297071 CNOT8Q9UFF9 292 aaKnown RBP20.88■□□□□ 0.93
TRA2A-201ENST00000297071 NOVA2Q9UNW9 492 aaKnown RBP20.88■□□□□ 0.93
TRA2A-201ENST00000297071 LOXHD1Q8IVV2 1947 aa20.87■□□□□ 0.93
TRA2A-201ENST00000297071 TBX3O15119 743 aa20.87■□□□□ 0.93
TRA2A-201ENST00000297071 ASAP2O43150 1006 aa20.87■□□□□ 0.93
TRA2A-201ENST00000297071 SLC8A1P32418 973 aa20.87■□□□□ 0.93
TRA2A-201ENST00000297071 DNA2P51530 1060 aa20.87■□□□□ 0.93
TRA2A-201ENST00000297071 ARID5AQ03989 594 aa20.87■□□□□ 0.93
TRA2A-201ENST00000297071 ZNF543Q08ER8 600 aa20.87■□□□□ 0.93
TRA2A-201ENST00000297071 DHX34Q14147 1143 aaKnown RBP20.87■□□□□ 0.93
TRA2A-201ENST00000297071 ITIH4Q14624 930 aa20.87■□□□□ 0.93
TRA2A-201ENST00000297071 GPATCH4Q5T3I0 446 aaKnown RBP20.87■□□□□ 0.93
TRA2A-201ENST00000297071 CYB5D1Q6P9G0 228 aa20.87■□□□□ 0.93
TRA2A-201ENST00000297071 NBPF5PQ86XG9 351 aaPredicted RBP20.87■□□□□ 0.93
TRA2A-201ENST00000297071 NELFCDQ8IXH7 590 aa20.87■□□□□ 0.93
TRA2A-201ENST00000297071 SLC30A5Q8TAD4 765 aa20.87■□□□□ 0.93
TRA2A-201ENST00000297071 CARD9Q9H257 536 aa20.87■□□□□ 0.93
TRA2A-201ENST00000297071 JMJD4Q9H9V9 463 aa20.87■□□□□ 0.93
TRA2A-201ENST00000297071 SIX2Q9NPC8 291 aa20.87■□□□□ 0.93
TRA2A-201ENST00000297071 TYW1Q9NV66 732 aaKnown RBP20.87■□□□□ 0.93
TRA2A-201ENST00000297071 DAPK3O43293 454 aa20.86■□□□□ 0.93
TRA2A-201ENST00000297071 ZPR1O75312 459 aa20.86■□□□□ 0.93
TRA2A-201ENST00000297071 TMEM253P0C7T8 217 aa20.86■□□□□ 0.93
TRA2A-201ENST00000297071 XRCC5P13010 732 aaKnown RBP20.86■□□□□ 0.93
TRA2A-201ENST00000297071 HSPA6P17066 643 aa20.86■□□□□ 0.93
TRA2A-201ENST00000297071 SLC9A1P19634 815 aa20.86■□□□□ 0.93
TRA2A-201ENST00000297071 LMNB1P20700 586 aa20.86■□□□□ 0.93
TRA2A-201ENST00000297071 HADHBP55084 474 aaKnown RBP20.86■□□□□ 0.93
TRA2A-201ENST00000297071 RHBDL3P58872 404 aa20.86■□□□□ 0.93
TRA2A-201ENST00000297071 RNASE9P60153 205 aaKnown RBP20.86■□□□□ 0.93
TRA2A-201ENST00000297071 ODF2Q5BJF6 829 aa20.86■□□□□ 0.93
TRA2A-201ENST00000297071 CHMP6Q96FZ7 201 aa20.86■□□□□ 0.93
TRA2A-201ENST00000297071 XPO6Q96QU8 1125 aaKnown RBP20.86■□□□□ 0.93
TRA2A-201ENST00000297071 CNOT7Q9UIV1 285 aaKnown RBP20.86■□□□□ 0.93
TRA2A-201ENST00000297071 KIAA1024Q9UPX6 916 aa20.86■□□□□ 0.93
TRA2A-201ENST00000297071 E9PMD0 336 aa20.85■□□□□ 0.93
TRA2A-201ENST00000297071 MARCH6O60337 910 aa20.85■□□□□ 0.93
TRA2A-201ENST00000297071 SCTRP47872 440 aa20.85■□□□□ 0.93
TRA2A-201ENST00000297071 PPATQ06203 517 aa20.85■□□□□ 0.93
TRA2A-201ENST00000297071 GABPAQ06546 454 aa20.85■□□□□ 0.93
TRA2A-201ENST00000297071 TCEAL1Q15170 157 aa20.85■□□□□ 0.93
TRA2A-201ENST00000297071 QPCTQ16769 361 aa20.85■□□□□ 0.93
TRA2A-201ENST00000297071 KRT71Q3SY84 523 aa20.85■□□□□ 0.93
TRA2A-201ENST00000297071 ARSHQ5FYA8 562 aa20.85■□□□□ 0.93
TRA2A-201ENST00000297071 DUPD1Q68J44 220 aa20.85■□□□□ 0.93
TRA2A-201ENST00000297071 DDX42Q86XP3 938 aaKnown RBP eCLIP20.85■□□□□ 0.931e-7■□□□□ 8.5
TRA2A-201ENST00000297071 RBM46Q8TBY0 533 aaKnown RBP20.85■□□□□ 0.93
TRA2A-201ENST00000297071 ACSBG1Q96GR2 724 aa20.85■□□□□ 0.93
TRA2A-201ENST00000297071 JPH2Q9BR39 696 aaPredicted RBP20.85■□□□□ 0.93
TRA2A-201ENST00000297071 LOC102724159A0A0B4J2E5 919 aa20.85■□□□□ 0.93
TRA2A-201ENST00000297071 DNM1LO00429 736 aa20.85■□□□□ 0.93
TRA2A-201ENST00000297071 MGRN1O60291 552 aa20.85■□□□□ 0.93
TRA2A-201ENST00000297071 IL1R1P14778 569 aa20.85■□□□□ 0.93
TRA2A-201ENST00000297071 MMP14P50281 582 aa20.85■□□□□ 0.93
TRA2A-201ENST00000297071 MAGOHP61326 146 aaKnown RBP20.85■□□□□ 0.93
TRA2A-201ENST00000297071 DHX9Q08211 1270 aaKnown RBP20.85■□□□□ 0.93
TRA2A-201ENST00000297071 GRAPQ13588 217 aa20.85■□□□□ 0.93
TRA2A-201ENST00000297071 PWP2Q15269 919 aaKnown RBP20.85■□□□□ 0.93
TRA2A-201ENST00000297071 GPIHBP1Q8IV16 184 aa20.85■□□□□ 0.93
TRA2A-201ENST00000297071 SYT2Q8N9I0 419 aaPredicted RBP20.85■□□□□ 0.93
TRA2A-201ENST00000297071 OR2W6PQ8NHA6 318 aa20.85■□□□□ 0.93
TRA2A-201ENST00000297071 GRAPLQ8TC17 118 aaPredicted RBP20.85■□□□□ 0.93
TRA2A-201ENST00000297071 ATP8B4Q8TF62 1192 aa20.85■□□□□ 0.93
TRA2A-201ENST00000297071 RFFLQ8WZ73 363 aa20.85■□□□□ 0.93
TRA2A-201ENST00000297071 MAGOHBQ96A72 148 aaKnown RBP20.85■□□□□ 0.93
TRA2A-201ENST00000297071 FMO2Q99518 471 aa20.85■□□□□ 0.93
TRA2A-201ENST00000297071 AP1M1Q9BXS5 423 aa20.85■□□□□ 0.93
TRA2A-201ENST00000297071 AMACRQ9UHK6 382 aa20.85■□□□□ 0.93
TRA2A-201ENST00000297071 DDX3XO00571 662 aaKnown RBP eCLIP20.84■□□□□ 0.934e-21■■■■■ 31.7
TRA2A-201ENST00000297071 STAT1P42224 750 aa20.84■□□□□ 0.93
TRA2A-201ENST00000297071 GIT2Q14161 759 aa20.84■□□□□ 0.93
TRA2A-201ENST00000297071 GRIK5Q16478 980 aa20.84■□□□□ 0.93
TRA2A-201ENST00000297071 BTNL9Q6UXG8 535 aa20.84■□□□□ 0.93
TRA2A-201ENST00000297071 CENPHQ9H3R5 247 aa20.84■□□□□ 0.93
TRA2A-201ENST00000297071 ZDHHC18Q9NUE0 388 aa20.84■□□□□ 0.93
TRA2A-201ENST00000297071 DONSONQ9NYP3 566 aa20.84■□□□□ 0.93
TRA2A-201ENST00000297071 CCDC169A6NNP5 214 aa20.83■□□□□ 0.93
TRA2A-201ENST00000297071 ZBTB5O15062 677 aa20.83■□□□□ 0.93
TRA2A-201ENST00000297071 DDX3YO15523 660 aaKnown RBP20.83■□□□□ 0.93
TRA2A-201ENST00000297071 TTI1O43156 1089 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms