RNA–Protein interactions for RNA: ENST00000296255.7

RPN1-201, Transcript of ribophorin I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPN1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-201ENST00000296255 GCNT3O95395 438 aa18.2■□□□□ 0.5
RPN1-201ENST00000296255 NDUFB10O96000 172 aa18.2■□□□□ 0.5
RPN1-201ENST00000296255 CIITAP33076 1130 aa18.2■□□□□ 0.5
RPN1-201ENST00000296255 TATDN1Q6P1N9 297 aa18.2■□□□□ 0.5
RPN1-201ENST00000296255 SLC30A10Q6XR72 485 aa18.2■□□□□ 0.5
RPN1-201ENST00000296255 PROCA1Q8NCQ7 364 aaPredicted RBP18.2■□□□□ 0.5
RPN1-201ENST00000296255 OLIG1Q8TAK6 271 aa18.2■□□□□ 0.5
RPN1-201ENST00000296255 ACTRT1Q8TDG2 376 aa18.2■□□□□ 0.5
RPN1-201ENST00000296255 PBKQ96KB5 322 aa18.2■□□□□ 0.5
RPN1-201ENST00000296255 EIF2AK1Q9BQI3 630 aaKnown RBP18.2■□□□□ 0.5
RPN1-201ENST00000296255 GCNT4Q9P109 453 aa18.2■□□□□ 0.5
RPN1-201ENST00000296255 PI4KBQ9UBF8 816 aa18.2■□□□□ 0.5
RPN1-201ENST00000296255 FBXL5Q9UKA1 691 aa18.2■□□□□ 0.5
RPN1-201ENST00000296255 DDX3XO00571 662 aaKnown RBP eCLIP18.19■□□□□ 0.51e-20■■■■■ 56.9
RPN1-201ENST00000296255 SLC16A3O15427 465 aaKnown RBP18.19■□□□□ 0.5
RPN1-201ENST00000296255 GDF11O95390 407 aa18.19■□□□□ 0.5
RPN1-201ENST00000296255 JAG1P78504 1218 aa18.19■□□□□ 0.5
RPN1-201ENST00000296255 KCTD19Q17RG1 926 aaPredicted RBP18.19■□□□□ 0.5
RPN1-201ENST00000296255 KIAA0825Q8IV33 1275 aa18.19■□□□□ 0.5
RPN1-201ENST00000296255 METTL13Q8N6R0 699 aa18.19■□□□□ 0.5
RPN1-201ENST00000296255 BBXQ8WY36 941 aaPredicted RBP18.19■□□□□ 0.5
RPN1-201ENST00000296255 AP1M1Q9BXS5 423 aa18.19■□□□□ 0.5
RPN1-201ENST00000296255 TAF1DQ9H5J8 278 aaPredicted RBP18.19■□□□□ 0.5
RPN1-201ENST00000296255 DBNDD1Q9H9R9 158 aa18.19■□□□□ 0.5
RPN1-201ENST00000296255 METTL14Q9HCE5 456 aaKnown RBP18.19■□□□□ 0.5
RPN1-201ENST00000296255 ZMYM2Q9UBW7 1377 aa18.19■□□□□ 0.5
RPN1-201ENST00000296255 FLOT1O75955 427 aa18.18■□□□□ 0.5
RPN1-201ENST00000296255 EYA4O95677 639 aa18.18■□□□□ 0.5
RPN1-201ENST00000296255 HSPA9P38646 679 aaKnown RBP18.18■□□□□ 0.5
RPN1-201ENST00000296255 SF3B2Q13435 895 aaKnown RBP18.18■□□□□ 0.5
RPN1-201ENST00000296255 SYDE2Q5VT97 1194 aa18.18■□□□□ 0.5
RPN1-201ENST00000296255 KDM7AQ6ZMT4 941 aa18.18■□□□□ 0.5
RPN1-201ENST00000296255 SLFN11Q7Z7L1 901 aa18.18■□□□□ 0.5
RPN1-201ENST00000296255 PACS2Q86VP3 889 aa18.18■□□□□ 0.5
RPN1-201ENST00000296255 RNPC3Q96LT9 517 aaKnown RBP18.18■□□□□ 0.5
RPN1-201ENST00000296255 POLR3CQ9BUI4 534 aaPredicted RBP18.18■□□□□ 0.5
RPN1-201ENST00000296255 ISCUQ9H1K1 167 aa18.18■□□□□ 0.5
RPN1-201ENST00000296255 STXBP5LQ9Y2K9 1186 aa18.18■□□□□ 0.5
RPN1-201ENST00000296255 RABGAP1Q9Y3P9 1069 aa18.18■□□□□ 0.5
RPN1-201ENST00000296255 PCDHB13Q9Y5F0 798 aa18.18■□□□□ 0.5
RPN1-201ENST00000296255 SMCHD1A6NHR9 2005 aa18.18■□□□□ 0.5
RPN1-201ENST00000296255 BHMG1C9JSJ3 638 aaPredicted RBP18.18■□□□□ 0.5
RPN1-201ENST00000296255 TBCAO75347 108 aaKnown RBP18.18■□□□□ 0.5
RPN1-201ENST00000296255 FOSP01100 380 aaPredicted RBP18.18■□□□□ 0.5
RPN1-201ENST00000296255 RPL13P26373 211 aaKnown RBP18.18■□□□□ 0.5
RPN1-201ENST00000296255 IFI16Q16666 785 aaKnown RBP18.18■□□□□ 0.5
RPN1-201ENST00000296255 MCTP2Q6DN12 878 aa18.18■□□□□ 0.5
RPN1-201ENST00000296255 RINT1Q6NUQ1 792 aa18.18■□□□□ 0.5
RPN1-201ENST00000296255 GMCL1P1Q8NEA9 526 aa18.18■□□□□ 0.5
RPN1-201ENST00000296255 PIGOQ8TEQ8 1089 aa18.18■□□□□ 0.5
RPN1-201ENST00000296255 G3V3G9 751 aa18.17■□□□□ 0.5
RPN1-201ENST00000296255 EBAG9O00559 213 aa18.17■□□□□ 0.5
RPN1-201ENST00000296255 DCAF8Q5TAQ9 597 aa18.17■□□□□ 0.5
RPN1-201ENST00000296255 EMC10Q5UCC4 262 aa18.17■□□□□ 0.5
RPN1-201ENST00000296255 DDX42Q86XP3 938 aaKnown RBP eCLIP18.17■□□□□ 0.5
RPN1-201ENST00000296255 EFCAB13Q8IY85 973 aa18.17■□□□□ 0.5
RPN1-201ENST00000296255 GMCL1Q96IK5 515 aa18.17■□□□□ 0.5
RPN1-201ENST00000296255 NOC2LQ9Y3T9 749 aaKnown RBP18.17■□□□□ 0.5
RPN1-201ENST00000296255 FAM169AQ9Y6X4 670 aa18.17■□□□□ 0.5
RPN1-201ENST00000296255 IGLV3-22A0A075B6J6 115 aa18.17■□□□□ 0.5
RPN1-201ENST00000296255 H2AFZP0C0S5 128 aa18.17■□□□□ 0.5
RPN1-201ENST00000296255 ANXA13P27216 316 aa18.17■□□□□ 0.5
RPN1-201ENST00000296255 IKQ13123 557 aaPredicted RBP18.17■□□□□ 0.5
RPN1-201ENST00000296255 CTTNQ14247 550 aaKnown RBP18.17■□□□□ 0.5
RPN1-201ENST00000296255 TMEM179Q6ZVK1 233 aa18.17■□□□□ 0.5
RPN1-201ENST00000296255 H2AFVQ71UI9 128 aa18.17■□□□□ 0.5
RPN1-201ENST00000296255 SEPT12Q8IYM1 358 aa18.17■□□□□ 0.5
RPN1-201ENST00000296255 PPM1EQ8WY54 764 aa18.17■□□□□ 0.5
RPN1-201ENST00000296255 IDI2Q9BXS1 227 aa18.17■□□□□ 0.5
RPN1-201ENST00000296255 OLFML3Q9NRN5 406 aa18.17■□□□□ 0.5
RPN1-201ENST00000296255 PLAAQ9Y263 795 aa18.17■□□□□ 0.5
RPN1-201ENST00000296255 SAMM50Q9Y512 469 aa18.17■□□□□ 0.5
RPN1-201ENST00000296255 SHTN1A0MZ66 631 aa18.16■□□□□ 0.5
RPN1-201ENST00000296255 GTPBP10A4D1E9 387 aaKnown RBP18.16■□□□□ 0.5
RPN1-201ENST00000296255 PGRMC1O00264 195 aaKnown RBP18.16■□□□□ 0.5
RPN1-201ENST00000296255 ZBTB39O15060 712 aa18.16■□□□□ 0.5
RPN1-201ENST00000296255 GFPT2O94808 682 aa18.16■□□□□ 0.5
RPN1-201ENST00000296255 ITGA4P13612 1032 aa18.16■□□□□ 0.5
RPN1-201ENST00000296255 NPR1P16066 1061 aa18.16■□□□□ 0.5
RPN1-201ENST00000296255 NMT1P30419 496 aaKnown RBP18.16■□□□□ 0.5
RPN1-201ENST00000296255 ZC2HC1CQ53FD0 456 aaPredicted RBP18.16■□□□□ 0.5
RPN1-201ENST00000296255 LNX1Q8TBB1 728 aaPredicted RBP18.16■□□□□ 0.5
RPN1-201ENST00000296255 U2AF1L4Q8WU68 220 aaKnown RBP18.16■□□□□ 0.5
RPN1-201ENST00000296255 ATP6V1G3Q96LB4 118 aa18.16■□□□□ 0.5
RPN1-201ENST00000296255 HSD17B14Q9BPX1 270 aa18.16■□□□□ 0.5
RPN1-201ENST00000296255 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.16■□□□□ 0.53e-7■■□□□ 14.3
RPN1-201ENST00000296255 DDX47Q9H0S4 455 aaKnown RBP18.16■□□□□ 0.5
RPN1-201ENST00000296255 NEUROG2Q9H2A3 272 aa18.16■□□□□ 0.5
RPN1-201ENST00000296255 STK24Q9Y6E0 443 aa18.16■□□□□ 0.5
RPN1-201ENST00000296255 ATP8B3O60423 1300 aa18.16■□□□□ 0.5
RPN1-201ENST00000296255 VGLL3A8MV65 326 aa18.16■□□□□ 0.5
RPN1-201ENST00000296255 SART1O43290 800 aaKnown RBP18.16■□□□□ 0.5
RPN1-201ENST00000296255 CYP3A4P08684 503 aa18.16■□□□□ 0.5
RPN1-201ENST00000296255 GUCY1A3Q02108 690 aa18.16■□□□□ 0.5
RPN1-201ENST00000296255 HLTFQ14527 1009 aaKnown RBP eCLIP18.16■□□□□ 0.5
RPN1-201ENST00000296255 UAP1Q16222 522 aaPredicted RBP18.16■□□□□ 0.5
RPN1-201ENST00000296255 ABCB5Q2M3G0 1257 aa18.16■□□□□ 0.5
RPN1-201ENST00000296255 PEX26Q7Z412 305 aa18.16■□□□□ 0.5
RPN1-201ENST00000296255 EIF1ADQ8N9N8 165 aaKnown RBP18.16■□□□□ 0.5
RPN1-201ENST00000296255 SLC30A5Q8TAD4 765 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms