RNA–Protein interactions for RNA: ENST00000295688.7

CCT3-201, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT3, Length 2,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-201ENST00000295688 DCAF4Q8WV16 495 aa16.16■□□□□ 0.18
CCT3-201ENST00000295688 FAM20AQ96MK3 541 aa16.16■□□□□ 0.18
CCT3-201ENST00000295688 AMFRQ9UKV5 643 aa16.16■□□□□ 0.18
CCT3-201ENST00000295688 DAAM1Q9Y4D1 1078 aa16.16■□□□□ 0.18
CCT3-201ENST00000295688 POTEFA5A3E0 1075 aa16.16■□□□□ 0.18
CCT3-201ENST00000295688 USP17L15C9J2P7 530 aa16.16■□□□□ 0.18
CCT3-201ENST00000295688 USP17L13C9JLJ4 530 aa16.16■□□□□ 0.18
CCT3-201ENST00000295688 USP17L11C9JVI0 530 aa16.16■□□□□ 0.18
CCT3-201ENST00000295688 USP17L18D6R9N7 530 aa16.16■□□□□ 0.18
CCT3-201ENST00000295688 USP17L22D6RA61 530 aa16.16■□□□□ 0.18
CCT3-201ENST00000295688 USP17L17D6RBQ6 530 aa16.16■□□□□ 0.18
CCT3-201ENST00000295688 USP17L19D6RCP7 530 aa16.16■□□□□ 0.18
CCT3-201ENST00000295688 USP17L20D6RJB6 530 aa16.16■□□□□ 0.18
CCT3-201ENST00000295688 E7EVH7 732 aa16.16■□□□□ 0.18
CCT3-201ENST00000295688 PPP1R12BO60237 982 aaPredicted RBP16.16■□□□□ 0.18
CCT3-201ENST00000295688 FOSP01100 380 aaPredicted RBP16.16■□□□□ 0.18
CCT3-201ENST00000295688 NR3C1P04150 777 aa16.16■□□□□ 0.18
CCT3-201ENST00000295688 POTEIP0CG38 1075 aa16.16■□□□□ 0.18
CCT3-201ENST00000295688 ZBTB48P10074 688 aaPredicted RBP16.16■□□□□ 0.18
CCT3-201ENST00000295688 GAP43P17677 238 aa16.16■□□□□ 0.18
CCT3-201ENST00000295688 SHMT1P34896 483 aa16.16■□□□□ 0.18
CCT3-201ENST00000295688 USP17L24Q0WX57 530 aa16.16■□□□□ 0.18
CCT3-201ENST00000295688 QRICH1Q2TAL8 776 aa16.16■□□□□ 0.18
CCT3-201ENST00000295688 TCERG1LQ5VWI1 586 aa16.16■□□□□ 0.18
CCT3-201ENST00000295688 USP17L6PQ6QN14 398 aa16.16■□□□□ 0.18
CCT3-201ENST00000295688 POTEGQ6S5H5 508 aa16.16■□□□□ 0.18
CCT3-201ENST00000295688 POTEEQ6S8J3 1075 aa16.16■□□□□ 0.18
CCT3-201ENST00000295688 KCTD1Q719H9 257 aa16.16■□□□□ 0.18
CCT3-201ENST00000295688 ARMC9Q7Z3E5 817 aa16.16■□□□□ 0.18
CCT3-201ENST00000295688 UTP11Q9Y3A2 253 aaKnown RBP16.16■□□□□ 0.18
CCT3-201ENST00000295688 TAF1LQ8IZX4 1826 aa16.15■□□□□ 0.18
CCT3-201ENST00000295688 GREB1LQ9C091 1923 aaPredicted RBP16.15■□□□□ 0.18
CCT3-201ENST00000295688 GMNCA6NCL1 334 aa16.15■□□□□ 0.18
CCT3-201ENST00000295688 MPHOSPH10O00566 681 aaKnown RBP16.15■□□□□ 0.18
CCT3-201ENST00000295688 CCDC172P0C7W6 258 aa16.15■□□□□ 0.18
CCT3-201ENST00000295688 LMNB1P20700 586 aa16.15■□□□□ 0.18
CCT3-201ENST00000295688 DCAF17Q5H9S7 520 aaPredicted RBP16.15■□□□□ 0.18
CCT3-201ENST00000295688 SLC51AQ86UW1 340 aa16.15■□□□□ 0.18
CCT3-201ENST00000295688 ETNPPLQ8TBG4 499 aa16.15■□□□□ 0.18
CCT3-201ENST00000295688 RBM46Q8TBY0 533 aaKnown RBP16.15■□□□□ 0.18
CCT3-201ENST00000295688 SEC14L1Q92503 715 aa16.15■□□□□ 0.18
CCT3-201ENST00000295688 CABS1Q96KC9 395 aa16.15■□□□□ 0.18
CCT3-201ENST00000295688 NAP1L3Q99457 506 aaPredicted RBP16.15■□□□□ 0.18
CCT3-201ENST00000295688 REEP2Q9BRK0 252 aa16.15■□□□□ 0.18
CCT3-201ENST00000295688 CENPHQ9H3R5 247 aa16.15■□□□□ 0.18
CCT3-201ENST00000295688 C6orf229H3BNL8 230 aa16.14■□□□□ 0.17
CCT3-201ENST00000295688 TBCAO75347 108 aaKnown RBP16.14■□□□□ 0.17
CCT3-201ENST00000295688 STAT3P40763 770 aa16.14■□□□□ 0.17
CCT3-201ENST00000295688 CASP5P51878 434 aa16.14■□□□□ 0.17
CCT3-201ENST00000295688 EIF3BP55884 814 aaKnown RBP16.14■□□□□ 0.17
CCT3-201ENST00000295688 GTF2IP78347 998 aa16.14■□□□□ 0.17
CCT3-201ENST00000295688 ARHGAP4P98171 946 aa16.14■□□□□ 0.17
CCT3-201ENST00000295688 SPIRE1Q08AE8 756 aa16.14■□□□□ 0.17
CCT3-201ENST00000295688 ZNF844Q08AG5 666 aa16.14■□□□□ 0.17
CCT3-201ENST00000295688 UAP1Q16222 522 aaPredicted RBP16.14■□□□□ 0.17
CCT3-201ENST00000295688 NFIL3Q16649 462 aa16.14■□□□□ 0.17
CCT3-201ENST00000295688 DAAM2Q86T65 1068 aa16.14■□□□□ 0.17
CCT3-201ENST00000295688 NT5DC3Q86UY8 548 aa16.14■□□□□ 0.17
CCT3-201ENST00000295688 CLEC10AQ8IUN9 316 aa16.14■□□□□ 0.17
CCT3-201ENST00000295688 UBLCP1Q8WVY7 318 aaPredicted RBP16.14■□□□□ 0.17
CCT3-201ENST00000295688 HES6Q96HZ4 224 aa16.14■□□□□ 0.17
CCT3-201ENST00000295688 AP1M1Q9BXS5 423 aa16.14■□□□□ 0.17
CCT3-201ENST00000295688 DDX47Q9H0S4 455 aaKnown RBP16.14■□□□□ 0.17
CCT3-201ENST00000295688 RAB17Q9H0T7 212 aa16.14■□□□□ 0.17
CCT3-201ENST00000295688 SIX2Q9NPC8 291 aa16.14■□□□□ 0.17
CCT3-201ENST00000295688 USP40Q9NVE5 1235 aa16.14■□□□□ 0.17
CCT3-201ENST00000295688 GCNT4Q9P109 453 aa16.14■□□□□ 0.17
CCT3-201ENST00000295688 AKAP3O75969 853 aa16.14■□□□□ 0.17
CCT3-201ENST00000295688 ADRA2BP18089 450 aa16.14■□□□□ 0.17
CCT3-201ENST00000295688 HPDP32754 393 aaPredicted RBP16.14■□□□□ 0.17
CCT3-201ENST00000295688 PPP2R2AP63151 447 aa16.14■□□□□ 0.17
CCT3-201ENST00000295688 PABPC4Q13310 644 aaKnown RBP eCLIP16.14■□□□□ 0.172e-12■■■□□ 16.6
CCT3-201ENST00000295688 ODF2Q5BJF6 829 aa16.14■□□□□ 0.17
CCT3-201ENST00000295688 FBXW10Q5XX13 1052 aa16.14■□□□□ 0.17
CCT3-201ENST00000295688 U2AF1L4Q8WU68 220 aaKnown RBP16.14■□□□□ 0.17
CCT3-201ENST00000295688 CRYGNQ8WXF5 182 aa16.14■□□□□ 0.17
CCT3-201ENST00000295688 MKL1Q969V6 931 aa16.14■□□□□ 0.17
CCT3-201ENST00000295688 TACO1Q9BSH4 297 aaKnown RBP16.14■□□□□ 0.17
CCT3-201ENST00000295688 COA1Q9GZY4 146 aa16.14■□□□□ 0.17
CCT3-201ENST00000295688 ACTR5Q9H9F9 607 aaPredicted RBP16.14■□□□□ 0.17
CCT3-201ENST00000295688 POLLQ9UGP5 575 aa16.14■□□□□ 0.17
CCT3-201ENST00000295688 EIF3DO15371 548 aaKnown RBP eCLIP16.13■□□□□ 0.172e-9■■□□□ 13
CCT3-201ENST00000295688 SPATA31C1P0DKV0 1188 aa16.13■□□□□ 0.17
CCT3-201ENST00000295688 HOXD13P35453 343 aa16.13■□□□□ 0.17
CCT3-201ENST00000295688 RNF187Q5TA31 235 aaPredicted RBP16.13■□□□□ 0.17
CCT3-201ENST00000295688 C6orf89Q6UWU4 347 aa16.13■□□□□ 0.17
CCT3-201ENST00000295688 SLC35C1Q96A29 364 aa16.13■□□□□ 0.17
CCT3-201ENST00000295688 POLR3CQ9BUI4 534 aaPredicted RBP16.13■□□□□ 0.17
CCT3-201ENST00000295688 DDX4Q9NQI0 724 aaKnown RBP16.13■□□□□ 0.17
CCT3-201ENST00000295688 OLFML3Q9NRN5 406 aa16.13■□□□□ 0.17
CCT3-201ENST00000295688 NCANO14594 1321 aa16.13■□□□□ 0.17
CCT3-201ENST00000295688 QSER1Q2KHR3 1735 aa16.13■□□□□ 0.17
CCT3-201ENST00000295688 DDX3XO00571 662 aaKnown RBP eCLIP16.13■□□□□ 0.177e-56■■□□□ 13.8
CCT3-201ENST00000295688 EYA4O95677 639 aa16.13■□□□□ 0.17
CCT3-201ENST00000295688 PAEPP09466 180 aa16.13■□□□□ 0.17
CCT3-201ENST00000295688 HOXA10P31260 410 aaPredicted RBP16.13■□□□□ 0.17
CCT3-201ENST00000295688 MNAT1P51948 309 aa16.13■□□□□ 0.17
CCT3-201ENST00000295688 SEC24CP53992 1094 aa16.13■□□□□ 0.17
CCT3-201ENST00000295688 HDLBPQ00341 1268 aaKnown RBP16.13■□□□□ 0.17
CCT3-201ENST00000295688 VPS72Q15906 364 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms