RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 TTBK2Q6IQ55 1244 aa19.14■□□□□ 0.65
CDC42EP3-201ENST00000295324 FAM133AQ8N9E0 248 aa19.14■□□□□ 0.65
CDC42EP3-201ENST00000295324 ATF2P15336 505 aa19.14■□□□□ 0.65
CDC42EP3-201ENST00000295324 C10orf76Q5T2E6 689 aa19.14■□□□□ 0.65
CDC42EP3-201ENST00000295324 PROM2Q8N271 834 aa19.14■□□□□ 0.65
CDC42EP3-201ENST00000295324 MRPL4Q9BYD3 311 aaKnown RBP19.14■□□□□ 0.65
CDC42EP3-201ENST00000295324 KIF9Q9HAQ2 790 aa19.14■□□□□ 0.65
CDC42EP3-201ENST00000295324 GBP1P32455 592 aa19.14■□□□□ 0.65
CDC42EP3-201ENST00000295324 STAT5BP51692 787 aa19.14■□□□□ 0.65
CDC42EP3-201ENST00000295324 ETF1P62495 437 aaKnown RBP19.14■□□□□ 0.65
CDC42EP3-201ENST00000295324 KRT71Q3SY84 523 aa19.14■□□□□ 0.65
CDC42EP3-201ENST00000295324 TMEM39BQ9GZU3 492 aa19.14■□□□□ 0.65
CDC42EP3-201ENST00000295324 NOC2LQ9Y3T9 749 aaKnown RBP19.14■□□□□ 0.65
CDC42EP3-201ENST00000295324 PASKQ96RG2 1323 aa19.14■□□□□ 0.65
CDC42EP3-201ENST00000295324 TSPY1Q01534 308 aa19.14■□□□□ 0.65
CDC42EP3-201ENST00000295324 C17orf53Q8N3J3 647 aaPredicted RBP19.14■□□□□ 0.65
CDC42EP3-201ENST00000295324 ZBTB9Q96C00 473 aa19.14■□□□□ 0.65
CDC42EP3-201ENST00000295324 MTIF3Q9H2K0 278 aaKnown RBP19.14■□□□□ 0.65
CDC42EP3-201ENST00000295324 PRAMEF18Q5VWM3 479 aa19.13■□□□□ 0.65
CDC42EP3-201ENST00000295324 C9orf131Q5VYM1 1079 aa19.13■□□□□ 0.65
CDC42EP3-201ENST00000295324 DDX23Q9BUQ8 820 aaKnown RBP19.13■□□□□ 0.65
CDC42EP3-201ENST00000295324 SAMSN1Q9NSI8 373 aaKnown RBP19.13■□□□□ 0.65
CDC42EP3-201ENST00000295324 POLIQ9UNA4 740 aa19.13■□□□□ 0.65
CDC42EP3-201ENST00000295324 CDC42EP1Q00587 391 aa19.13■□□□□ 0.65
CDC42EP3-201ENST00000295324 ARL13BQ3SXY8 428 aa19.13■□□□□ 0.65
CDC42EP3-201ENST00000295324 C11orf57Q6ZUT1 292 aaPredicted RBP19.13■□□□□ 0.65
CDC42EP3-201ENST00000295324 TDP2O95551 362 aa19.13■□□□□ 0.65
CDC42EP3-201ENST00000295324 POLR3FQ9H1D9 316 aaPredicted RBP19.13■□□□□ 0.65
CDC42EP3-201ENST00000295324 SRBD1Q8N5C6 995 aaKnown RBP19.12■□□□□ 0.65
CDC42EP3-201ENST00000295324 GPRC5AQ8NFJ5 357 aa19.12■□□□□ 0.65
CDC42EP3-201ENST00000295324 KBTBD13C9JR72 458 aa19.12■□□□□ 0.65
CDC42EP3-201ENST00000295324 PRPSAP2O60256 369 aa19.12■□□□□ 0.65
CDC42EP3-201ENST00000295324 RBL2Q08999 1139 aa19.12■□□□□ 0.65
CDC42EP3-201ENST00000295324 CCNYQ8ND76 341 aa19.12■□□□□ 0.65
CDC42EP3-201ENST00000295324 KATNAL1Q9BW62 490 aa19.12■□□□□ 0.65
CDC42EP3-201ENST00000295324 NR3C1P04150 777 aa19.12■□□□□ 0.65
CDC42EP3-201ENST00000295324 CDC25BP30305 580 aa19.12■□□□□ 0.65
CDC42EP3-201ENST00000295324 CDKL2Q92772 493 aa19.12■□□□□ 0.65
CDC42EP3-201ENST00000295324 ANAPC5Q9UJX4 755 aa19.12■□□□□ 0.65
CDC42EP3-201ENST00000295324 PRR12Q9ULL5 1215 aa19.12■□□□□ 0.65
CDC42EP3-201ENST00000295324 ADAT2Q7Z6V5 191 aaKnown RBP19.12■□□□□ 0.65
CDC42EP3-201ENST00000295324 AFAP1L1Q8TED9 768 aa19.12■□□□□ 0.65
CDC42EP3-201ENST00000295324 CFAP57Q96MR6 1250 aa19.12■□□□□ 0.65
CDC42EP3-201ENST00000295324 EIF2AK1Q9BQI3 630 aaKnown RBP19.12■□□□□ 0.65
CDC42EP3-201ENST00000295324 ADARB2Q9NS39 739 aaKnown RBP19.12■□□□□ 0.65
CDC42EP3-201ENST00000295324 SERPING1P05155 500 aa19.12■□□□□ 0.65
CDC42EP3-201ENST00000295324 PPP4CP60510 307 aa19.12■□□□□ 0.65
CDC42EP3-201ENST00000295324 ERICH1Q86X53 443 aa19.12■□□□□ 0.65
CDC42EP3-201ENST00000295324 DONSONQ9NYP3 566 aa19.12■□□□□ 0.65
CDC42EP3-201ENST00000295324 POTEFA5A3E0 1075 aa19.11■□□□□ 0.65
CDC42EP3-201ENST00000295324 POTEIP0CG38 1075 aa19.11■□□□□ 0.65
CDC42EP3-201ENST00000295324 GPC3P51654 580 aa19.11■□□□□ 0.65
CDC42EP3-201ENST00000295324 EFNA5P52803 228 aa19.11■□□□□ 0.65
CDC42EP3-201ENST00000295324 POTEGQ6S5H5 508 aa19.11■□□□□ 0.65
CDC42EP3-201ENST00000295324 POTEEQ6S8J3 1075 aa19.11■□□□□ 0.65
CDC42EP3-201ENST00000295324 ELMOD1Q8N336 334 aa19.11■□□□□ 0.65
CDC42EP3-201ENST00000295324 GGPS1O95749 300 aa19.11■□□□□ 0.65
CDC42EP3-201ENST00000295324 RASA1P20936 1047 aa19.11■□□□□ 0.65
CDC42EP3-201ENST00000295324 KYAT1Q16773 422 aa19.11■□□□□ 0.65
CDC42EP3-201ENST00000295324 PFASO15067 1338 aa19.11■□□□□ 0.65
CDC42EP3-201ENST00000295324 RFX5P48382 616 aaPredicted RBP19.11■□□□□ 0.65
CDC42EP3-201ENST00000295324 ZNF699Q32M78 642 aa19.11■□□□□ 0.65
CDC42EP3-201ENST00000295324 CCDC170Q8IYT3 715 aa19.11■□□□□ 0.65
CDC42EP3-201ENST00000295324 NCAPGQ9BPX3 1015 aa19.11■□□□□ 0.65
CDC42EP3-201ENST00000295324 LRRIQ1Q96JM4 1722 aa19.11■□□□□ 0.65
CDC42EP3-201ENST00000295324 PPFIA1Q13136 1202 aa19.11■□□□□ 0.65
CDC42EP3-201ENST00000295324 TTC39CQ8N584 583 aa19.11■□□□□ 0.65
CDC42EP3-201ENST00000295324 FAM213AQ9BRX8 229 aa19.11■□□□□ 0.65
CDC42EP3-201ENST00000295324 GDAQ9Y2T3 454 aa19.11■□□□□ 0.65
CDC42EP3-201ENST00000295324 ECE1P42892 770 aa19.1■□□□□ 0.65
CDC42EP3-201ENST00000295324 CHST13Q8NET6 341 aa19.1■□□□□ 0.65
CDC42EP3-201ENST00000295324 DYNC1LI2O43237 492 aaPredicted RBP19.1■□□□□ 0.65
CDC42EP3-201ENST00000295324 GH1P01241 217 aa19.1■□□□□ 0.65
CDC42EP3-201ENST00000295324 NR3C2P08235 984 aa19.1■□□□□ 0.65
CDC42EP3-201ENST00000295324 SRGNP10124 158 aa19.1■□□□□ 0.65
CDC42EP3-201ENST00000295324 CYP2B6P20813 491 aa19.1■□□□□ 0.65
CDC42EP3-201ENST00000295324 MAD1L1Q9Y6D9 718 aa19.1■□□□□ 0.65
CDC42EP3-201ENST00000295324 MCF2LO15068 1137 aa19.1■□□□□ 0.65
CDC42EP3-201ENST00000295324 C6orf222P0C671 652 aaPredicted RBP19.1■□□□□ 0.65
CDC42EP3-201ENST00000295324 COASYQ13057 564 aa19.1■□□□□ 0.65
CDC42EP3-201ENST00000295324 TCP11X2Q5H9J9 407 aa19.1■□□□□ 0.65
CDC42EP3-201ENST00000295324 SCYL3Q8IZE3 742 aa19.1■□□□□ 0.65
CDC42EP3-201ENST00000295324 SEPT1Q8WYJ6 367 aa19.1■□□□□ 0.65
CDC42EP3-201ENST00000295324 TUFT1Q9NNX1 390 aa19.1■□□□□ 0.65
CDC42EP3-201ENST00000295324 KRT1P04264 644 aa19.1■□□□□ 0.65
CDC42EP3-201ENST00000295324 XKR3Q5GH77 459 aa19.1■□□□□ 0.65
CDC42EP3-201ENST00000295324 MAGOHBQ96A72 148 aaKnown RBP19.1■□□□□ 0.65
CDC42EP3-201ENST00000295324 SCINQ9Y6U3 715 aa19.1■□□□□ 0.65
CDC42EP3-201ENST00000295324 EFCAB13Q8IY85 973 aa19.09■□□□□ 0.65
CDC42EP3-201ENST00000295324 SMARCAD1Q9H4L7 1026 aa19.09■□□□□ 0.65
CDC42EP3-201ENST00000295324 PRDM5Q9NQX1 630 aaPredicted RBP19.09■□□□□ 0.65
CDC42EP3-201ENST00000295324 ESYT2A0FGR8 921 aa19.09■□□□□ 0.65
CDC42EP3-201ENST00000295324 RGS16O15492 202 aaPredicted RBP19.09■□□□□ 0.65
CDC42EP3-201ENST00000295324 EXOSC10Q01780 885 aaKnown RBP19.09■□□□□ 0.65
CDC42EP3-201ENST00000295324 CALN1Q9BXU9 219 aa19.09■□□□□ 0.65
CDC42EP3-201ENST00000295324 DPH5Q9H2P9 285 aa19.09■□□□□ 0.65
CDC42EP3-201ENST00000295324 U2AF2P26368 475 aaKnown RBP eCLIP19.09■□□□□ 0.65
CDC42EP3-201ENST00000295324 ELF2Q15723 593 aa19.09■□□□□ 0.65
CDC42EP3-201ENST00000295324 KNOP1Q1ED39 458 aaKnown RBP19.09■□□□□ 0.65
CDC42EP3-201ENST00000295324 PLEKHA4Q9H4M7 779 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms