RNA–Protein interactions for RNA: ENST00000295057.3

LRRTM1-201, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRTM1, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-201ENST00000295057 MRPL12P52815 198 aaKnown RBP16.73■□□□□ 0.27
LRRTM1-201ENST00000295057 PAK2Q13177 524 aa16.73■□□□□ 0.27
LRRTM1-201ENST00000295057 RASA3Q14644 834 aa16.73■□□□□ 0.27
LRRTM1-201ENST00000295057 QPCTQ16769 361 aa16.73■□□□□ 0.27
LRRTM1-201ENST00000295057 TBC1D10BQ4KMP7 808 aaPredicted RBP16.73■□□□□ 0.27
LRRTM1-201ENST00000295057 EMC10Q5UCC4 262 aa16.73■□□□□ 0.27
LRRTM1-201ENST00000295057 SYDE2Q5VT97 1194 aa16.73■□□□□ 0.27
LRRTM1-201ENST00000295057 OR2W6PQ8NHA6 318 aa16.73■□□□□ 0.27
LRRTM1-201ENST00000295057 SGSM3Q96HU1 749 aa16.73■□□□□ 0.27
LRRTM1-201ENST00000295057 ZBED3Q96IU2 234 aaPredicted RBP16.73■□□□□ 0.27
LRRTM1-201ENST00000295057 CCDC114Q96M63 670 aa16.73■□□□□ 0.27
LRRTM1-201ENST00000295057 OSBPL7Q9BZF2 842 aa16.73■□□□□ 0.27
LRRTM1-201ENST00000295057 PGAP2Q9UHJ9 254 aa16.73■□□□□ 0.27
LRRTM1-201ENST00000295057 PLAAQ9Y263 795 aa16.73■□□□□ 0.27
LRRTM1-201ENST00000295057 PSME4Q14997 1843 aa16.73■□□□□ 0.27
LRRTM1-201ENST00000295057 LRRC53A6NM62 1247 aa16.73■□□□□ 0.27
LRRTM1-201ENST00000295057 TMCO5BA8MYB1 307 aa16.73■□□□□ 0.27
LRRTM1-201ENST00000295057 HOXA13P31271 388 aaPredicted RBP16.73■□□□□ 0.27
LRRTM1-201ENST00000295057 PRPHP41219 470 aa16.73■□□□□ 0.27
LRRTM1-201ENST00000295057 CFAP221Q4G0U5 840 aa16.73■□□□□ 0.27
LRRTM1-201ENST00000295057 RRAGAQ7L523 313 aa16.73■□□□□ 0.27
LRRTM1-201ENST00000295057 GMCL1Q96IK5 515 aa16.73■□□□□ 0.27
LRRTM1-201ENST00000295057 SGIP1Q9BQI5 828 aa16.73■□□□□ 0.27
LRRTM1-201ENST00000295057 HAUS2Q9NVX0 235 aa16.73■□□□□ 0.27
LRRTM1-201ENST00000295057 DDX20Q9UHI6 824 aaKnown RBP16.73■□□□□ 0.27
LRRTM1-201ENST00000295057 PACSIN2Q9UNF0 486 aaPredicted RBP16.73■□□□□ 0.27
LRRTM1-201ENST00000295057 KIF13BQ9NQT8 1826 aa16.72■□□□□ 0.27
LRRTM1-201ENST00000295057 CCNE1P24864 410 aa16.72■□□□□ 0.27
LRRTM1-201ENST00000295057 HNRNPH3P31942 346 aaKnown RBP16.72■□□□□ 0.27
LRRTM1-201ENST00000295057 FIGNQ5HY92 759 aa16.72■□□□□ 0.27
LRRTM1-201ENST00000295057 WLSQ5T9L3 541 aa16.72■□□□□ 0.27
LRRTM1-201ENST00000295057 NOC3LQ8WTT2 800 aaKnown RBP16.72■□□□□ 0.27
LRRTM1-201ENST00000295057 DHTKD1Q96HY7 919 aaPredicted RBP16.72■□□□□ 0.27
LRRTM1-201ENST00000295057 MMRN2Q9H8L6 949 aa16.72■□□□□ 0.27
LRRTM1-201ENST00000295057 KBTBD4Q9NVX7 518 aa16.72■□□□□ 0.27
LRRTM1-201ENST00000295057 PRR12Q9ULL5 1215 aa16.72■□□□□ 0.27
LRRTM1-201ENST00000295057 FZD1Q9UP38 647 aa16.72■□□□□ 0.27
LRRTM1-201ENST00000295057 LAD1O00515 517 aa16.72■□□□□ 0.27
LRRTM1-201ENST00000295057 MEIS2O14770 477 aa16.72■□□□□ 0.27
LRRTM1-201ENST00000295057 LCA5LO95447 670 aa16.72■□□□□ 0.27
LRRTM1-201ENST00000295057 FTCDO95954 541 aa16.72■□□□□ 0.27
LRRTM1-201ENST00000295057 PAX7P23759 505 aa16.72■□□□□ 0.27
LRRTM1-201ENST00000295057 GMPSP49915 693 aaPredicted RBP16.72■□□□□ 0.27
LRRTM1-201ENST00000295057 PDE4DQ08499 809 aa16.72■□□□□ 0.27
LRRTM1-201ENST00000295057 GLE1Q53GS7 698 aaKnown RBP16.72■□□□□ 0.27
LRRTM1-201ENST00000295057 PRAMEF18Q5VWM3 479 aa16.72■□□□□ 0.27
LRRTM1-201ENST00000295057 CYB5D1Q6P9G0 228 aa16.72■□□□□ 0.27
LRRTM1-201ENST00000295057 CD302Q8IX05 232 aa16.72■□□□□ 0.27
LRRTM1-201ENST00000295057 CCSER1Q9C0I3 900 aa16.72■□□□□ 0.27
LRRTM1-201ENST00000295057 SIK3Q9Y2K2 1263 aa16.72■□□□□ 0.27
LRRTM1-201ENST00000295057 ATP2C2O75185 946 aa16.71■□□□□ 0.27
LRRTM1-201ENST00000295057 TMOD1P28289 359 aa16.71■□□□□ 0.27
LRRTM1-201ENST00000295057 CDR1P51861 262 aa16.71■□□□□ 0.27
LRRTM1-201ENST00000295057 PPP1R18Q6NYC8 613 aa16.71■□□□□ 0.27
LRRTM1-201ENST00000295057 CCDC174Q6PII3 467 aa16.71■□□□□ 0.27
LRRTM1-201ENST00000295057 CCDC121Q6ZUS5 278 aa16.71■□□□□ 0.27
LRRTM1-201ENST00000295057 MREGQ8N565 214 aa16.71■□□□□ 0.27
LRRTM1-201ENST00000295057 HAS1Q92839 578 aa16.71■□□□□ 0.27
LRRTM1-201ENST00000295057 VPS33BQ9H267 617 aa16.71■□□□□ 0.27
LRRTM1-201ENST00000295057 FBXO28Q9NVF7 368 aa16.71■□□□□ 0.27
LRRTM1-201ENST00000295057 DDX25Q9UHL0 483 aaKnown RBP16.71■□□□□ 0.27
LRRTM1-201ENST00000295057 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.71■□□□□ 0.27
LRRTM1-201ENST00000295057 PLCB4Q15147 1175 aa16.71■□□□□ 0.26
LRRTM1-201ENST00000295057 E2F5Q15329 346 aa16.71■□□□□ 0.26
LRRTM1-201ENST00000295057 FBXO11Q86XK2 927 aa16.71■□□□□ 0.26
LRRTM1-201ENST00000295057 PARP9Q8IXQ6 854 aa16.71■□□□□ 0.26
LRRTM1-201ENST00000295057 MICALL2Q8IY33 904 aa16.71■□□□□ 0.26
LRRTM1-201ENST00000295057 FUKQ8N0W3 1084 aa16.71■□□□□ 0.26
LRRTM1-201ENST00000295057 MTMR14Q8NCE2 650 aa16.71■□□□□ 0.26
LRRTM1-201ENST00000295057 TBC1D5Q92609 795 aa16.71■□□□□ 0.26
LRRTM1-201ENST00000295057 SCLT1Q96NL6 688 aa16.71■□□□□ 0.26
LRRTM1-201ENST00000295057 SMCHD1A6NHR9 2005 aa16.7■□□□□ 0.26
LRRTM1-201ENST00000295057 HMGB1P1B2RPK0 211 aaPredicted RBP16.7■□□□□ 0.26
LRRTM1-201ENST00000295057 OPLAHO14841 1288 aa16.7■□□□□ 0.26
LRRTM1-201ENST00000295057 PTGER2P43116 358 aa16.7■□□□□ 0.26
LRRTM1-201ENST00000295057 CRYMQ14894 314 aa16.7■□□□□ 0.26
LRRTM1-201ENST00000295057 FMNL3Q8IVF7 1028 aa16.7■□□□□ 0.26
LRRTM1-201ENST00000295057 KIRREL3Q8IZU9 778 aa16.7■□□□□ 0.26
LRRTM1-201ENST00000295057 PROCA1Q8NCQ7 364 aaPredicted RBP16.7■□□□□ 0.26
LRRTM1-201ENST00000295057 RNF217Q8TC41 542 aa16.7■□□□□ 0.26
LRRTM1-201ENST00000295057 NOX5Q96PH1 765 aa16.7■□□□□ 0.26
LRRTM1-201ENST00000295057 AMNQ9BXJ7 453 aa16.7■□□□□ 0.26
LRRTM1-201ENST00000295057 TMBIM4Q9HC24 238 aa16.7■□□□□ 0.26
LRRTM1-201ENST00000295057 TMX2Q9Y320 296 aa16.7■□□□□ 0.26
LRRTM1-201ENST00000295057 FRMD3A2A2Y4 597 aa16.7■□□□□ 0.26
LRRTM1-201ENST00000295057 RAD51CO43502 376 aa16.7■□□□□ 0.26
LRRTM1-201ENST00000295057 CAP2P40123 477 aa16.7■□□□□ 0.26
LRRTM1-201ENST00000295057 SNCBQ16143 134 aa16.7■□□□□ 0.26
LRRTM1-201ENST00000295057 ECM1Q16610 540 aa16.7■□□□□ 0.26
LRRTM1-201ENST00000295057 C11orf91Q3C1V1 193 aa16.7■□□□□ 0.26
LRRTM1-201ENST00000295057 CCDC155Q8N6L0 562 aa16.7■□□□□ 0.26
LRRTM1-201ENST00000295057 ANO3Q9BYT9 981 aa16.7■□□□□ 0.26
LRRTM1-201ENST00000295057 SEMA6BQ9H3T3 888 aa16.7■□□□□ 0.26
LRRTM1-201ENST00000295057 ARHGEF10LQ9HCE6 1279 aa16.7■□□□□ 0.26
LRRTM1-201ENST00000295057 TPX2Q9ULW0 747 aaKnown RBP16.7■□□□□ 0.26
LRRTM1-201ENST00000295057 COL2A1P02458 1487 aaPredicted RBP16.69■□□□□ 0.26
LRRTM1-201ENST00000295057 GOLGA6L7A0A1B0GV03 622 aa16.69■□□□□ 0.26
LRRTM1-201ENST00000295057 PALMO75781 387 aa16.69■□□□□ 0.26
LRRTM1-201ENST00000295057 KLHL7Q8IXQ5 586 aa16.69■□□□□ 0.26
LRRTM1-201ENST00000295057 SLC24A3Q9HC58 644 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms