RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 TMC3Q7Z5M5 1100 aa15.99■□□□□ 0.15
CCNF-201ENST00000293968 YTHDF3Q7Z739 585 aaKnown RBP15.99■□□□□ 0.15
CCNF-201ENST00000293968 ACTRT1Q8TDG2 376 aa15.99■□□□□ 0.15
CCNF-201ENST00000293968 SCFD2Q8WU76 684 aa15.99■□□□□ 0.15
CCNF-201ENST00000293968 ELAC2Q9BQ52 826 aaKnown RBP15.99■□□□□ 0.15
CCNF-201ENST00000293968 JMJD4Q9H9V9 463 aa15.99■□□□□ 0.15
CCNF-201ENST00000293968 FAM114A2Q9NRY5 505 aa15.99■□□□□ 0.15
CCNF-201ENST00000293968 CHORDC1Q9UHD1 332 aaPredicted RBP15.99■□□□□ 0.15
CCNF-201ENST00000293968 PNMA6FA0A0J9YX94 578 aa15.99■□□□□ 0.15
CCNF-201ENST00000293968 PPP1R12BO60237 982 aaPredicted RBP15.99■□□□□ 0.15
CCNF-201ENST00000293968 MED24O75448 989 aa15.99■□□□□ 0.15
CCNF-201ENST00000293968 CLNS1AP54105 237 aaKnown RBP15.99■□□□□ 0.15
CCNF-201ENST00000293968 USH1GQ495M9 461 aa15.99■□□□□ 0.15
CCNF-201ENST00000293968 CCDC38Q502W7 563 aa15.99■□□□□ 0.15
CCNF-201ENST00000293968 HOOK3Q86VS8 718 aa15.99■□□□□ 0.15
CCNF-201ENST00000293968 RBM46Q8TBY0 533 aaKnown RBP15.99■□□□□ 0.15
CCNF-201ENST00000293968 AZI2Q9H6S1 392 aa15.99■□□□□ 0.15
CCNF-201ENST00000293968 SAMD15Q9P1V8 674 aa15.99■□□□□ 0.15
CCNF-201ENST00000293968 NR2E1Q9Y466 385 aa15.99■□□□□ 0.15
CCNF-201ENST00000293968 RSPH10B2B2RC85 870 aa15.99■□□□□ 0.15
CCNF-201ENST00000293968 CHMP2AO43633 222 aa15.99■□□□□ 0.15
CCNF-201ENST00000293968 RSPH10BP0C881 870 aa15.99■□□□□ 0.15
CCNF-201ENST00000293968 CHN1P15882 459 aa15.99■□□□□ 0.15
CCNF-201ENST00000293968 NAA25Q14CX7 972 aa15.99■□□□□ 0.15
CCNF-201ENST00000293968 SEPT2Q15019 361 aa15.99■□□□□ 0.15
CCNF-201ENST00000293968 ASPRV1Q53RT3 343 aa15.99■□□□□ 0.15
CCNF-201ENST00000293968 C10orf76Q5T2E6 689 aa15.99■□□□□ 0.15
CCNF-201ENST00000293968 TRMT1LQ7Z2T5 733 aaKnown RBP15.99■□□□□ 0.15
CCNF-201ENST00000293968 RAB17Q9H0T7 212 aa15.99■□□□□ 0.15
CCNF-201ENST00000293968 IKZF4Q9H2S9 585 aa15.99■□□□□ 0.15
CCNF-201ENST00000293968 TAF1P21675 1872 aa15.99■□□□□ 0.15
CCNF-201ENST00000293968 SLURP2P0DP57 97 aa15.98■□□□□ 0.15
CCNF-201ENST00000293968 ECHS1P30084 290 aa15.98■□□□□ 0.15
CCNF-201ENST00000293968 KNOP1Q1ED39 458 aaKnown RBP15.98■□□□□ 0.15
CCNF-201ENST00000293968 TBC1D1Q86TI0 1168 aaPredicted RBP15.98■□□□□ 0.15
CCNF-201ENST00000293968 FAM212AQ96EL1 285 aa15.98■□□□□ 0.15
CCNF-201ENST00000293968 CHMP6Q96FZ7 201 aa15.98■□□□□ 0.15
CCNF-201ENST00000293968 RTFDC1Q9BY42 306 aaPredicted RBP15.98■□□□□ 0.15
CCNF-201ENST00000293968 DHX36Q9H2U1 1008 aaKnown RBP15.98■□□□□ 0.15
CCNF-201ENST00000293968 RIOX1Q9H6W3 641 aa15.98■□□□□ 0.15
CCNF-201ENST00000293968 PTPN22Q9Y2R2 807 aa15.98■□□□□ 0.15
CCNF-201ENST00000293968 ESYT2A0FGR8 921 aa15.98■□□□□ 0.15
CCNF-201ENST00000293968 AKAP3O75969 853 aa15.98■□□□□ 0.15
CCNF-201ENST00000293968 NR3C1P04150 777 aa15.98■□□□□ 0.15
CCNF-201ENST00000293968 SHBGP04278 402 aa15.98■□□□□ 0.15
CCNF-201ENST00000293968 TNFAIP3P21580 790 aa15.98■□□□□ 0.15
CCNF-201ENST00000293968 RPL13P26373 211 aaKnown RBP15.98■□□□□ 0.15
CCNF-201ENST00000293968 RFC4P35249 363 aa15.98■□□□□ 0.15
CCNF-201ENST00000293968 CYP2J2P51589 502 aa15.98■□□□□ 0.15
CCNF-201ENST00000293968 FUKQ8N0W3 1084 aa15.98■□□□□ 0.15
CCNF-201ENST00000293968 BCAS3Q9H6U6 928 aa15.98■□□□□ 0.15
CCNF-201ENST00000293968 MTMR4Q9NYA4 1195 aa15.98■□□□□ 0.15
CCNF-201ENST00000293968 PCDHA1Q9Y5I3 950 aa15.98■□□□□ 0.15
CCNF-201ENST00000293968 F8VZ95 297 aa15.98■□□□□ 0.15
CCNF-201ENST00000293968 RIMBP2O15034 1052 aa15.98■□□□□ 0.15
CCNF-201ENST00000293968 ORC2Q13416 577 aaPredicted RBP15.98■□□□□ 0.15
CCNF-201ENST00000293968 ERMNQ8TAM6 284 aa15.98■□□□□ 0.15
CCNF-201ENST00000293968 SLC35G2Q8TBE7 412 aa15.98■□□□□ 0.15
CCNF-201ENST00000293968 RPGRQ92834 1020 aaKnown RBP15.98■□□□□ 0.15
CCNF-201ENST00000293968 XPO6Q96QU8 1125 aaKnown RBP15.98■□□□□ 0.15
CCNF-201ENST00000293968 REEP2Q9BRK0 252 aa15.98■□□□□ 0.15
CCNF-201ENST00000293968 BHMT2Q9H2M3 363 aa15.98■□□□□ 0.15
CCNF-201ENST00000293968 KCNA1Q09470 495 aa15.97■□□□□ 0.15
CCNF-201ENST00000293968 OTUD6AQ7L8S5 288 aa15.97■□□□□ 0.15
CCNF-201ENST00000293968 KSR1Q8IVT5 923 aa15.97■□□□□ 0.15
CCNF-201ENST00000293968 KCTD10Q9H3F6 313 aa15.97■□□□□ 0.15
CCNF-201ENST00000293968 SLC12A6Q9UHW9 1150 aa15.97■□□□□ 0.15
CCNF-201ENST00000293968 PLCG2P16885 1265 aa15.97■□□□□ 0.15
CCNF-201ENST00000293968 MLXIPLQ9NP71 852 aa15.97■□□□□ 0.15
CCNF-201ENST00000293968 INTS9Q9NV88 658 aaKnown RBP15.97■□□□□ 0.15
CCNF-201ENST00000293968 CTTNBP2NLQ9P2B4 639 aa15.97■□□□□ 0.15
CCNF-201ENST00000293968 AJAP1Q9UKB5 411 aaPredicted RBP15.97■□□□□ 0.15
CCNF-201ENST00000293968 TPX2Q9ULW0 747 aaKnown RBP15.97■□□□□ 0.15
CCNF-201ENST00000293968 H0YGN5 161 aa15.97■□□□□ 0.15
CCNF-201ENST00000293968 CHADLQ6NUI6 762 aa15.97■□□□□ 0.15
CCNF-201ENST00000293968 SLITRK6Q9H5Y7 841 aa15.97■□□□□ 0.15
CCNF-201ENST00000293968 VEZTQ9HBM0 779 aa15.97■□□□□ 0.15
CCNF-201ENST00000293968 PPP1R9AQ9ULJ8 1098 aa15.97■□□□□ 0.15
CCNF-201ENST00000293968 NFS1Q9Y697 457 aa15.97■□□□□ 0.15
CCNF-201ENST00000293968 DDX3XO00571 662 aaKnown RBP eCLIP15.97■□□□□ 0.154e-14■■■□□ 15.5
CCNF-201ENST00000293968 EVI5O60447 810 aa15.97■□□□□ 0.15
CCNF-201ENST00000293968 AGBL2Q5U5Z8 902 aa15.97■□□□□ 0.15
CCNF-201ENST00000293968 AADACL2Q6P093 401 aa15.97■□□□□ 0.15
CCNF-201ENST00000293968 SLC30A10Q6XR72 485 aa15.97■□□□□ 0.15
CCNF-201ENST00000293968 MYCT1Q8N699 235 aa15.97■□□□□ 0.15
CCNF-201ENST00000293968 LRRC57Q8N9N7 239 aa15.97■□□□□ 0.15
CCNF-201ENST00000293968 NEK9Q8TD19 979 aa15.97■□□□□ 0.15
CCNF-201ENST00000293968 SGSM3Q96HU1 749 aa15.97■□□□□ 0.15
CCNF-201ENST00000293968 CALR3Q96L12 384 aaKnown RBP15.97■□□□□ 0.15
CCNF-201ENST00000293968 SUFUQ9UMX1 484 aa15.97■□□□□ 0.15
CCNF-201ENST00000293968 ATXN2Q99700 1313 aaKnown RBP15.96■□□□□ 0.15
CCNF-201ENST00000293968 FAM13AO94988 1023 aa15.96■□□□□ 0.15
CCNF-201ENST00000293968 MAP2K1Q02750 393 aaPredicted RBP15.96■□□□□ 0.15
CCNF-201ENST00000293968 LRRC14Q15048 493 aa15.96■□□□□ 0.15
CCNF-201ENST00000293968 TMEM59LQ9UK28 342 aa15.96■□□□□ 0.15
CCNF-201ENST00000293968 SCP2P22307 547 aa15.96■□□□□ 0.15
CCNF-201ENST00000293968 FGFR4P22455 802 aa15.96■□□□□ 0.15
CCNF-201ENST00000293968 ELF1P32519 619 aa15.96■□□□□ 0.15
CCNF-201ENST00000293968 PMS2P54278 862 aa15.96■□□□□ 0.15
CCNF-201ENST00000293968 PPP4CP60510 307 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms