RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 PMLP29590 882 aa17.3■□□□□ 0.36
SSRP1-202ENST00000293880 LINC00301Q8NCQ3 95 aa17.3■□□□□ 0.36
SSRP1-202ENST00000293880 STK17AQ9UEE5 414 aa17.3■□□□□ 0.36
SSRP1-202ENST00000293880 TSC22D4Q9Y3Q8 395 aa17.3■□□□□ 0.36
SSRP1-202ENST00000293880 IKBKBO14920 756 aa17.3■□□□□ 0.36
SSRP1-202ENST00000293880 ZBED1O96006 694 aa17.3■□□□□ 0.36
SSRP1-202ENST00000293880 KCNQ4P56696 695 aa17.3■□□□□ 0.36
SSRP1-202ENST00000293880 SERPINI1Q99574 410 aa17.3■□□□□ 0.36
SSRP1-202ENST00000293880 FRA10AC1Q70Z53 315 aa17.3■□□□□ 0.36
SSRP1-202ENST00000293880 ZNF507Q8TCN5 953 aa17.3■□□□□ 0.36
SSRP1-202ENST00000293880 MAP4K1Q92918 833 aa17.3■□□□□ 0.36
SSRP1-202ENST00000293880 OSBPL1AQ9BXW6 950 aa17.3■□□□□ 0.36
SSRP1-202ENST00000293880 BABAM1Q9NWV8 329 aa17.3■□□□□ 0.36
SSRP1-202ENST00000293880 PLEKHA8P1O95397 391 aa17.29■□□□□ 0.36
SSRP1-202ENST00000293880 ATP2B4P23634 1241 aa17.29■□□□□ 0.36
SSRP1-202ENST00000293880 BPIFB4P59827 614 aa17.29■□□□□ 0.36
SSRP1-202ENST00000293880 EPM2AIP1Q7L775 607 aaPredicted RBP17.29■□□□□ 0.36
SSRP1-202ENST00000293880 DBNDD1Q9H9R9 158 aa17.29■□□□□ 0.36
SSRP1-202ENST00000293880 SATB2Q9UPW6 733 aa17.29■□□□□ 0.36
SSRP1-202ENST00000293880 SH2B2O14492 632 aaPredicted RBP17.29■□□□□ 0.36
SSRP1-202ENST00000293880 PPEF1O14829 653 aaPredicted RBP17.29■□□□□ 0.36
SSRP1-202ENST00000293880 MAGOHP61326 146 aaKnown RBP17.29■□□□□ 0.36
SSRP1-202ENST00000293880 ZMYM1Q5SVZ6 1142 aa17.29■□□□□ 0.36
SSRP1-202ENST00000293880 USPL1Q5W0Q7 1092 aa17.29■□□□□ 0.36
SSRP1-202ENST00000293880 CATSPER3Q86XQ3 398 aa17.29■□□□□ 0.36
SSRP1-202ENST00000293880 KIF24Q5T7B8 1368 aa17.29■□□□□ 0.36
SSRP1-202ENST00000293880 TMEM2Q9UHN6 1383 aa17.29■□□□□ 0.36
SSRP1-202ENST00000293880 ZNF804BA4D1E1 1349 aa17.29■□□□□ 0.36
SSRP1-202ENST00000293880 ESYT3A0FGR9 886 aa17.29■□□□□ 0.36
SSRP1-202ENST00000293880 ATP8B1O43520 1251 aa17.29■□□□□ 0.36
SSRP1-202ENST00000293880 GAP43P17677 238 aa17.29■□□□□ 0.36
SSRP1-202ENST00000293880 OCA2Q04671 838 aa17.29■□□□□ 0.36
SSRP1-202ENST00000293880 SIX6OS1Q8N1H7 587 aa17.29■□□□□ 0.36
SSRP1-202ENST00000293880 CPSF3Q9UKF6 684 aaKnown RBP17.29■□□□□ 0.36
SSRP1-202ENST00000293880 GDAQ9Y2T3 454 aa17.29■□□□□ 0.36
SSRP1-202ENST00000293880 SYCE1LA8MT33 242 aa17.29■□□□□ 0.36
SSRP1-202ENST00000293880 MED7O43513 233 aa17.29■□□□□ 0.36
SSRP1-202ENST00000293880 SEC24DO94855 1032 aaPredicted RBP17.29■□□□□ 0.36
SSRP1-202ENST00000293880 CENPUQ71F23 418 aa17.29■□□□□ 0.36
SSRP1-202ENST00000293880 CYP4F11Q9HBI6 524 aa17.29■□□□□ 0.36
SSRP1-202ENST00000293880 GIMAP4Q9NUV9 329 aa17.29■□□□□ 0.36
SSRP1-202ENST00000293880 KIF17Q9P2E2 1029 aa17.29■□□□□ 0.36
SSRP1-202ENST00000293880 E2F6O75461 281 aa17.29■□□□□ 0.36
SSRP1-202ENST00000293880 TTLL1O95922 423 aa17.29■□□□□ 0.36
SSRP1-202ENST00000293880 EPHB1P54762 984 aa17.29■□□□□ 0.36
SSRP1-202ENST00000293880 RBBP7Q16576 425 aa17.29■□□□□ 0.36
SSRP1-202ENST00000293880 C6orf118Q5T5N4 469 aa17.29■□□□□ 0.36
SSRP1-202ENST00000293880 CCDC124Q96CT7 223 aaKnown RBP17.29■□□□□ 0.36
SSRP1-202ENST00000293880 DACH2Q96NX9 599 aa17.29■□□□□ 0.36
SSRP1-202ENST00000293880 KCNG1Q9UIX4 513 aa17.29■□□□□ 0.36
SSRP1-202ENST00000293880 PPP6R3Q5H9R7 873 aaPredicted RBP17.28■□□□□ 0.36
SSRP1-202ENST00000293880 PIGOQ8TEQ8 1089 aa17.28■□□□□ 0.36
SSRP1-202ENST00000293880 ZNF229Q9UJW7 825 aa17.28■□□□□ 0.36
SSRP1-202ENST00000293880 DISP1Q96F81 1524 aa17.28■□□□□ 0.36
SSRP1-202ENST00000293880 ESRRBO95718 433 aa17.28■□□□□ 0.36
SSRP1-202ENST00000293880 MMS22LQ6ZRQ5 1243 aa17.28■□□□□ 0.36
SSRP1-202ENST00000293880 NOP53Q9NZM5 478 aaKnown RBP17.28■□□□□ 0.36
SSRP1-202ENST00000293880 MKL2Q9ULH7 1088 aa17.28■□□□□ 0.36
SSRP1-202ENST00000293880 RASA4BC9J798 803 aa17.28■□□□□ 0.36
SSRP1-202ENST00000293880 RASA4O43374 803 aa17.28■□□□□ 0.36
SSRP1-202ENST00000293880 NAA30Q147X3 362 aaPredicted RBP17.28■□□□□ 0.36
SSRP1-202ENST00000293880 ERFEQ4G0M1 354 aa17.28■□□□□ 0.36
SSRP1-202ENST00000293880 NFRKBQ6P4R8 1299 aa17.28■□□□□ 0.36
SSRP1-202ENST00000293880 DPP9Q86TI2 863 aa17.28■□□□□ 0.36
SSRP1-202ENST00000293880 ALG13Q9NP73 1137 aaKnown RBP17.28■□□□□ 0.36
SSRP1-202ENST00000293880 SUGT1Q9Y2Z0 365 aa17.28■□□□□ 0.36
SSRP1-202ENST00000293880 HMGB1P1B2RPK0 211 aaPredicted RBP17.28■□□□□ 0.36
SSRP1-202ENST00000293880 COPEO14579 308 aa17.28■□□□□ 0.36
SSRP1-202ENST00000293880 KRT33BQ14525 404 aa17.28■□□□□ 0.36
SSRP1-202ENST00000293880 ARHGAP27Q6ZUM4 889 aa17.28■□□□□ 0.36
SSRP1-202ENST00000293880 EXOC4Q96A65 974 aa17.28■□□□□ 0.36
SSRP1-202ENST00000293880 NRBF2Q96F24 287 aa17.28■□□□□ 0.36
SSRP1-202ENST00000293880 COG4Q9H9E3 785 aa17.28■□□□□ 0.36
SSRP1-202ENST00000293880 MFAP3LO75121 409 aa17.28■□□□□ 0.36
SSRP1-202ENST00000293880 RXRBP28702 533 aa17.28■□□□□ 0.36
SSRP1-202ENST00000293880 ADCY2Q08462 1091 aa17.28■□□□□ 0.36
SSRP1-202ENST00000293880 TMEM94Q12767 1356 aa17.27■□□□□ 0.36
SSRP1-202ENST00000293880 TYW5A2RUC4 315 aaKnown RBP17.27■□□□□ 0.36
SSRP1-202ENST00000293880 RESTQ13127 1097 aa17.27■□□□□ 0.36
SSRP1-202ENST00000293880 ADAM33Q9BZ11 813 aa17.27■□□□□ 0.36
SSRP1-202ENST00000293880 SARS2Q9NP81 518 aaKnown RBP17.27■□□□□ 0.36
SSRP1-202ENST00000293880 PHKG2P15735 406 aa17.27■□□□□ 0.36
SSRP1-202ENST00000293880 OLFML2BQ68BL8 750 aa17.27■□□□□ 0.36
SSRP1-202ENST00000293880 L3MBTL1Q9Y468 752 aa17.27■□□□□ 0.36
SSRP1-202ENST00000293880 LAD1O00515 517 aa17.27■□□□□ 0.36
SSRP1-202ENST00000293880 ABI1Q8IZP0 508 aa17.27■□□□□ 0.36
SSRP1-202ENST00000293880 ATXN7L3BQ96GX2 97 aa17.27■□□□□ 0.36
SSRP1-202ENST00000293880 AMNQ9BXJ7 453 aa17.27■□□□□ 0.36
SSRP1-202ENST00000293880 VPS11Q9H270 941 aa17.27■□□□□ 0.36
SSRP1-202ENST00000293880 NDST4Q9H3R1 872 aa17.27■□□□□ 0.36
SSRP1-202ENST00000293880 ANP32DO95626 131 aa17.27■□□□□ 0.35
SSRP1-202ENST00000293880 SNX19Q92543 992 aa17.27■□□□□ 0.35
SSRP1-202ENST00000293880 MAGEF1Q9HAY2 307 aa17.27■□□□□ 0.35
SSRP1-202ENST00000293880 LRFN2Q9ULH4 789 aa17.27■□□□□ 0.35
SSRP1-202ENST00000293880 HEY1Q9Y5J3 304 aa17.27■□□□□ 0.35
SSRP1-202ENST00000293880 CFAP43Q8NDM7 1665 aa17.27■□□□□ 0.35
SSRP1-202ENST00000293880 PANX2Q96RD6 677 aa17.26■□□□□ 0.35
SSRP1-202ENST00000293880 MRPL47Q9HD33 250 aaKnown RBP17.26■□□□□ 0.35
SSRP1-202ENST00000293880 SLC5A4Q9NY91 659 aa17.26■□□□□ 0.35
SSRP1-202ENST00000293880 KLC3Q6P597 504 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms