RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 TYW1Q9NV66 732 aaKnown RBP16.53■□□□□ 0.24
CCDC116-201ENST00000292779 TMOD2Q9NZR1 351 aa16.53■□□□□ 0.24
CCDC116-201ENST00000292779 TSKSQ9UJT2 592 aa16.53■□□□□ 0.24
CCDC116-201ENST00000292779 COL2A1P02458 1487 aaPredicted RBP16.52■□□□□ 0.24
CCDC116-201ENST00000292779 LTBP3Q9NS15 1303 aa16.52■□□□□ 0.24
CCDC116-201ENST00000292779 SFI1A8K8P3 1242 aa16.52■□□□□ 0.24
CCDC116-201ENST00000292779 FTCDO95954 541 aa16.52■□□□□ 0.24
CCDC116-201ENST00000292779 CFBP00751 764 aa16.52■□□□□ 0.24
CCDC116-201ENST00000292779 NR3C1P04150 777 aa16.52■□□□□ 0.24
CCDC116-201ENST00000292779 UCHL3P15374 230 aa16.52■□□□□ 0.24
CCDC116-201ENST00000292779 PON1P27169 355 aa16.52■□□□□ 0.24
CCDC116-201ENST00000292779 CASP4P49662 377 aa16.52■□□□□ 0.24
CCDC116-201ENST00000292779 KCNA1Q09470 495 aa16.52■□□□□ 0.24
CCDC116-201ENST00000292779 CTTNQ14247 550 aaKnown RBP16.52■□□□□ 0.24
CCDC116-201ENST00000292779 BMT2Q1RMZ1 405 aa16.52■□□□□ 0.24
CCDC116-201ENST00000292779 IRF2BP2Q7Z5L9 587 aa16.52■□□□□ 0.24
CCDC116-201ENST00000292779 CDAN1Q8IWY9 1227 aa16.52■□□□□ 0.24
CCDC116-201ENST00000292779 PIGOQ8TEQ8 1089 aa16.52■□□□□ 0.24
CCDC116-201ENST00000292779 WDR18Q9BV38 432 aa16.52■□□□□ 0.24
CCDC116-201ENST00000292779 FAM204AQ9H8W3 233 aa16.52■□□□□ 0.24
CCDC116-201ENST00000292779 ARHGEF10LQ9HCE6 1279 aa16.52■□□□□ 0.24
CCDC116-201ENST00000292779 PLCB1Q9NQ66 1216 aa16.52■□□□□ 0.24
CCDC116-201ENST00000292779 RBM12Q9NTZ6 932 aaKnown RBP16.52■□□□□ 0.24
CCDC116-201ENST00000292779 DNA2P51530 1060 aa16.52■□□□□ 0.23
CCDC116-201ENST00000292779 PTK2Q05397 1052 aa16.52■□□□□ 0.23
CCDC116-201ENST00000292779 EXOC3L4Q17RC7 722 aa16.52■□□□□ 0.23
CCDC116-201ENST00000292779 CIAPIN1Q6FI81 312 aa16.52■□□□□ 0.23
CCDC116-201ENST00000292779 RINT1Q6NUQ1 792 aa16.52■□□□□ 0.23
CCDC116-201ENST00000292779 JDP2Q8WYK2 163 aa16.52■□□□□ 0.23
CCDC116-201ENST00000292779 RIN2Q8WYP3 895 aaPredicted RBP16.52■□□□□ 0.23
CCDC116-201ENST00000292779 RUBCNQ92622 972 aa16.52■□□□□ 0.23
CCDC116-201ENST00000292779 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.52■□□□□ 0.23
CCDC116-201ENST00000292779 SYNPO2Q9UMS6 1093 aa16.52■□□□□ 0.23
CCDC116-201ENST00000292779 CLIC2O15247 247 aa16.51■□□□□ 0.23
CCDC116-201ENST00000292779 GGCXP38435 758 aa16.51■□□□□ 0.23
CCDC116-201ENST00000292779 ZSCAN26Q16670 478 aa16.51■□□□□ 0.23
CCDC116-201ENST00000292779 CFAP221Q4G0U5 840 aa16.51■□□□□ 0.23
CCDC116-201ENST00000292779 TCERG1LQ5VWI1 586 aa16.51■□□□□ 0.23
CCDC116-201ENST00000292779 OTOP1Q7RTM1 612 aa16.51■□□□□ 0.23
CCDC116-201ENST00000292779 SPAG5Q96R06 1193 aa16.51■□□□□ 0.23
CCDC116-201ENST00000292779 HSD17B14Q9BPX1 270 aa16.51■□□□□ 0.23
CCDC116-201ENST00000292779 TMX2Q9Y320 296 aa16.51■□□□□ 0.23
CCDC116-201ENST00000292779 PCDHGC5Q9Y5F6 944 aa16.51■□□□□ 0.23
CCDC116-201ENST00000292779 FZD9O00144 591 aa16.5■□□□□ 0.23
CCDC116-201ENST00000292779 CHMP2AO43633 222 aa16.5■□□□□ 0.23
CCDC116-201ENST00000292779 CAPN2P17655 700 aa16.5■□□□□ 0.23
CCDC116-201ENST00000292779 RPL13P26373 211 aaKnown RBP16.5■□□□□ 0.23
CCDC116-201ENST00000292779 EPHA7Q15375 998 aa16.5■□□□□ 0.23
CCDC116-201ENST00000292779 CCDC174Q6PII3 467 aa16.5■□□□□ 0.23
CCDC116-201ENST00000292779 ZNF571Q7Z3V5 609 aaPredicted RBP16.5■□□□□ 0.23
CCDC116-201ENST00000292779 TPH2Q8IWU9 490 aa16.5■□□□□ 0.23
CCDC116-201ENST00000292779 STIM2Q9P246 746 aa16.5■□□□□ 0.23
CCDC116-201ENST00000292779 ZNF70Q9UC06 446 aaPredicted RBP16.5■□□□□ 0.23
CCDC116-201ENST00000292779 ASTN2O75129 1339 aaPredicted RBP16.5■□□□□ 0.23
CCDC116-201ENST00000292779 RBBP6Q7Z6E9 1792 aaKnown RBP16.5■□□□□ 0.23
CCDC116-201ENST00000292779 AGPSO00116 658 aa16.5■□□□□ 0.23
CCDC116-201ENST00000292779 SLITRK3O94933 977 aa16.5■□□□□ 0.23
CCDC116-201ENST00000292779 EPB41P11171 864 aaKnown RBP16.5■□□□□ 0.23
CCDC116-201ENST00000292779 UBXN2AP68543 259 aa16.5■□□□□ 0.23
CCDC116-201ENST00000292779 NBPF9Q3BBW0 867 aa16.5■□□□□ 0.23
CCDC116-201ENST00000292779 MEI1Q5TIA1 1274 aa16.5■□□□□ 0.23
CCDC116-201ENST00000292779 LRCH2Q5VUJ6 765 aa16.5■□□□□ 0.23
CCDC116-201ENST00000292779 C8orf74Q6P047 294 aa16.5■□□□□ 0.23
CCDC116-201ENST00000292779 SND1Q7KZF4 910 aaKnown RBP eCLIP16.5■□□□□ 0.23
CCDC116-201ENST00000292779 RBM46Q8TBY0 533 aaKnown RBP16.5■□□□□ 0.23
CCDC116-201ENST00000292779 DYDC2Q96IM9 177 aa16.5■□□□□ 0.23
CCDC116-201ENST00000292779 IKZF4Q9H2S9 585 aa16.5■□□□□ 0.23
CCDC116-201ENST00000292779 METTL14Q9HCE5 456 aaKnown RBP16.5■□□□□ 0.23
CCDC116-201ENST00000292779 GOPCQ9HD26 462 aa16.5■□□□□ 0.23
CCDC116-201ENST00000292779 OLFML3Q9NRN5 406 aa16.5■□□□□ 0.23
CCDC116-201ENST00000292779 ZBTB21Q9ULJ3 1066 aa16.5■□□□□ 0.23
CCDC116-201ENST00000292779 PACSIN2Q9UNF0 486 aaPredicted RBP16.5■□□□□ 0.23
CCDC116-201ENST00000292779 GJA3Q9Y6H8 435 aa16.5■□□□□ 0.23
CCDC116-201ENST00000292779 GRID2IPA4D2P6 1211 aa16.49■□□□□ 0.23
CCDC116-201ENST00000292779 ZBTB39O15060 712 aa16.49■□□□□ 0.23
CCDC116-201ENST00000292779 SLC16A3O15427 465 aaKnown RBP16.49■□□□□ 0.23
CCDC116-201ENST00000292779 PSMD10O75832 226 aa16.49■□□□□ 0.23
CCDC116-201ENST00000292779 GAP43P17677 238 aa16.49■□□□□ 0.23
CCDC116-201ENST00000292779 ACTN2P35609 894 aa16.49■□□□□ 0.23
CCDC116-201ENST00000292779 DLGAP5Q15398 846 aa16.49■□□□□ 0.23
CCDC116-201ENST00000292779 ZYXQ15942 572 aaKnown RBP16.49■□□□□ 0.23
CCDC116-201ENST00000292779 MUM1L1Q5H9M0 696 aa16.49■□□□□ 0.23
CCDC116-201ENST00000292779 GOLGA5Q8TBA6 731 aa16.49■□□□□ 0.23
CCDC116-201ENST00000292779 FAM151AQ8WW52 585 aa16.49■□□□□ 0.23
CCDC116-201ENST00000292779 SLC35C1Q96A29 364 aa16.49■□□□□ 0.23
CCDC116-201ENST00000292779 TUFT1Q9NNX1 390 aa16.49■□□□□ 0.23
CCDC116-201ENST00000292779 RNF14Q9UBS8 474 aa16.49■□□□□ 0.23
CCDC116-201ENST00000292779 PCDHB13Q9Y5F0 798 aa16.49■□□□□ 0.23
CCDC116-201ENST00000292779 TGFB1I1O43294 461 aa16.49■□□□□ 0.23
CCDC116-201ENST00000292779 FAM13AO94988 1023 aa16.49■□□□□ 0.23
CCDC116-201ENST00000292779 NMT1P30419 496 aaKnown RBP16.49■□□□□ 0.23
CCDC116-201ENST00000292779 GMPSP49915 693 aaPredicted RBP16.49■□□□□ 0.23
CCDC116-201ENST00000292779 SAMD1Q6SPF0 538 aaPredicted RBP16.49■□□□□ 0.23
CCDC116-201ENST00000292779 GBP6Q6ZN66 633 aa16.49■□□□□ 0.23
CCDC116-201ENST00000292779 MYCT1Q8N699 235 aa16.49■□□□□ 0.23
CCDC116-201ENST00000292779 SIX2Q9NPC8 291 aa16.49■□□□□ 0.23
CCDC116-201ENST00000292779 AJAP1Q9UKB5 411 aaPredicted RBP16.49■□□□□ 0.23
CCDC116-201ENST00000292779 CNTNAP1P78357 1384 aa16.48■□□□□ 0.23
CCDC116-201ENST00000292779 ZMYM2Q9UBW7 1377 aa16.48■□□□□ 0.23
CCDC116-201ENST00000292779 MYH11P35749 1972 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms