RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 DMTNQ08495 405 aa13.76□□□□□ -0.21
PTCD1-201ENST00000292478 SF3A3Q12874 501 aaKnown RBP eCLIP13.76□□□□□ -0.21
PTCD1-201ENST00000292478 PADI6Q6TGC4 694 aa13.76□□□□□ -0.21
PTCD1-201ENST00000292478 TOGARAM2Q6ZUX3 1019 aa13.76□□□□□ -0.21
PTCD1-201ENST00000292478 MIGA2Q7L4E1 593 aa13.76□□□□□ -0.21
PTCD1-201ENST00000292478 PLCD3Q8N3E9 789 aa13.76□□□□□ -0.21
PTCD1-201ENST00000292478 GBP5Q96PP8 586 aa13.76□□□□□ -0.21
PTCD1-201ENST00000292478 GJB4Q9NTQ9 266 aa13.76□□□□□ -0.21
PTCD1-201ENST00000292478 LRRD1A4D1F6 860 aa13.76□□□□□ -0.21
PTCD1-201ENST00000292478 POTEMA6NI47 508 aa13.76□□□□□ -0.21
PTCD1-201ENST00000292478 TTI1O43156 1089 aa13.76□□□□□ -0.21
PTCD1-201ENST00000292478 CTNND1O60716 968 aaKnown RBP13.76□□□□□ -0.21
PTCD1-201ENST00000292478 ABL1P00519 1130 aa13.76□□□□□ -0.21
PTCD1-201ENST00000292478 P4HBP07237 508 aaKnown RBP13.76□□□□□ -0.21
PTCD1-201ENST00000292478 TMED2Q15363 201 aa13.76□□□□□ -0.21
PTCD1-201ENST00000292478 ZBTB33Q86T24 672 aa13.76□□□□□ -0.21
PTCD1-201ENST00000292478 ABI1Q8IZP0 508 aa13.76□□□□□ -0.21
PTCD1-201ENST00000292478 FAM84BQ96KN1 310 aaPredicted RBP13.76□□□□□ -0.21
PTCD1-201ENST00000292478 ZDHHC9Q9Y397 364 aa13.76□□□□□ -0.21
PTCD1-201ENST00000292478 A0A087WUV0 522 aaPredicted RBP13.76□□□□□ -0.21
PTCD1-201ENST00000292478 PDIA5Q14554 519 aa13.76□□□□□ -0.21
PTCD1-201ENST00000292478 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.76□□□□□ -0.21
PTCD1-201ENST00000292478 MAP2K2P36507 400 aa13.76□□□□□ -0.21
PTCD1-201ENST00000292478 FAM83BQ5T0W9 1011 aa13.76□□□□□ -0.21
PTCD1-201ENST00000292478 RSRC2Q7L4I2 434 aaKnown RBP13.76□□□□□ -0.21
PTCD1-201ENST00000292478 DHX40Q8IX18 779 aaKnown RBP13.76□□□□□ -0.21
PTCD1-201ENST00000292478 TXLNGQ9NUQ3 528 aa13.76□□□□□ -0.21
PTCD1-201ENST00000292478 SYNJ2BP-COX16A0A087WUM0 186 aa13.75□□□□□ -0.21
PTCD1-201ENST00000292478 IQANK1A0A1B0GTG1 560 aa13.75□□□□□ -0.21
PTCD1-201ENST00000292478 NBPF26B4DH59 902 aa13.75□□□□□ -0.21
PTCD1-201ENST00000292478 ECE2O60344 883 aa13.75□□□□□ -0.21
PTCD1-201ENST00000292478 IFT88Q13099 833 aa13.75□□□□□ -0.21
PTCD1-201ENST00000292478 SBK1Q52WX2 424 aa13.75□□□□□ -0.21
PTCD1-201ENST00000292478 NBPF10Q6P3W6 841 aaKnown RBP13.75□□□□□ -0.21
PTCD1-201ENST00000292478 PCGF5Q86SE9 256 aa13.75□□□□□ -0.21
PTCD1-201ENST00000292478 PDIK1LQ8N165 341 aa13.75□□□□□ -0.21
PTCD1-201ENST00000292478 SIX6OS1Q8N1H7 587 aa13.75□□□□□ -0.21
PTCD1-201ENST00000292478 NBPF15Q8N660 670 aa13.75□□□□□ -0.21
PTCD1-201ENST00000292478 COX16Q9P0S2 106 aa13.75□□□□□ -0.21
PTCD1-201ENST00000292478 ZBTB24O43167 697 aaPredicted RBP13.75□□□□□ -0.21
PTCD1-201ENST00000292478 PALMO75781 387 aa13.75□□□□□ -0.21
PTCD1-201ENST00000292478 CALB1P05937 261 aa13.75□□□□□ -0.21
PTCD1-201ENST00000292478 IFNAR2P48551 515 aa13.75□□□□□ -0.21
PTCD1-201ENST00000292478 KCNH2Q12809 1159 aa13.75□□□□□ -0.21
PTCD1-201ENST00000292478 TXNRD1Q16881 649 aa13.75□□□□□ -0.21
PTCD1-201ENST00000292478 ZNF667Q5HYK9 610 aa13.75□□□□□ -0.21
PTCD1-201ENST00000292478 NSUN6Q8TEA1 469 aaKnown RBP13.75□□□□□ -0.21
PTCD1-201ENST00000292478 PRPF31Q8WWY3 499 aaKnown RBP13.75□□□□□ -0.21
PTCD1-201ENST00000292478 STRIP2Q9ULQ0 834 aa13.75□□□□□ -0.21
PTCD1-201ENST00000292478 LRRC53A6NM62 1247 aa13.75□□□□□ -0.21
PTCD1-201ENST00000292478 USP17L10C9JJH3 530 aa13.75□□□□□ -0.21
PTCD1-201ENST00000292478 BASP1P80723 227 aaKnown RBP13.75□□□□□ -0.21
PTCD1-201ENST00000292478 ARL13BQ3SXY8 428 aa13.75□□□□□ -0.21
PTCD1-201ENST00000292478 CYP4F22Q6NT55 531 aa13.75□□□□□ -0.21
PTCD1-201ENST00000292478 ENOSF1Q7L5Y1 443 aa13.75□□□□□ -0.21
PTCD1-201ENST00000292478 TTC39CQ8N584 583 aa13.75□□□□□ -0.21
PTCD1-201ENST00000292478 TMEM35BQ8NCS4 154 aa13.75□□□□□ -0.21
PTCD1-201ENST00000292478 RUBCNQ92622 972 aa13.75□□□□□ -0.21
PTCD1-201ENST00000292478 HEXIM2Q96MH2 286 aaKnown RBP13.75□□□□□ -0.21
PTCD1-201ENST00000292478 GPR101Q96P66 508 aaPredicted RBP13.75□□□□□ -0.21
PTCD1-201ENST00000292478 CALN1Q9BXU9 219 aa13.75□□□□□ -0.21
PTCD1-201ENST00000292478 PIM2Q9P1W9 311 aa13.75□□□□□ -0.21
PTCD1-201ENST00000292478 HERC5Q9UII4 1024 aaKnown RBP13.75□□□□□ -0.21
PTCD1-201ENST00000292478 EXOC1LA0A1B0GW35 172 aa13.75□□□□□ -0.21
PTCD1-201ENST00000292478 FGGP02679 453 aa13.75□□□□□ -0.21
PTCD1-201ENST00000292478 CLTAP09496 248 aa13.75□□□□□ -0.21
PTCD1-201ENST00000292478 TBXAS1P24557 533 aaPredicted RBP13.75□□□□□ -0.21
PTCD1-201ENST00000292478 RAPH1Q70E73 1250 aa13.75□□□□□ -0.21
PTCD1-201ENST00000292478 CCNYQ8ND76 341 aa13.75□□□□□ -0.21
PTCD1-201ENST00000292478 RMDN3Q96TC7 470 aa13.75□□□□□ -0.21
PTCD1-201ENST00000292478 KCNJ6P48051 423 aa13.74□□□□□ -0.21
PTCD1-201ENST00000292478 NR1H3Q13133 447 aa13.74□□□□□ -0.21
PTCD1-201ENST00000292478 SHC4Q6S5L8 630 aa13.74□□□□□ -0.21
PTCD1-201ENST00000292478 ARHGEF1Q92888 912 aaKnown RBP13.74□□□□□ -0.21
PTCD1-201ENST00000292478 RRP15Q9Y3B9 282 aaKnown RBP13.74□□□□□ -0.21
PTCD1-201ENST00000292478 TRIM49BA6NDI0 452 aa13.74□□□□□ -0.21
PTCD1-201ENST00000292478 PNMA6AP0CW24 399 aaPredicted RBP13.74□□□□□ -0.21
PTCD1-201ENST00000292478 FBXO38Q6PIJ6 1188 aa13.74□□□□□ -0.21
PTCD1-201ENST00000292478 SRRM1Q8IYB3 904 aaKnown RBP13.74□□□□□ -0.21
PTCD1-201ENST00000292478 TAB3Q8N5C8 712 aaPredicted RBP13.74□□□□□ -0.21
PTCD1-201ENST00000292478 TTC1Q99614 292 aa13.74□□□□□ -0.21
PTCD1-201ENST00000292478 HINFPQ9BQA5 517 aa13.74□□□□□ -0.21
PTCD1-201ENST00000292478 NOVA2Q9UNW9 492 aaKnown RBP13.74□□□□□ -0.21
PTCD1-201ENST00000292478 E9PMD0 336 aa13.74□□□□□ -0.21
PTCD1-201ENST00000292478 MYBL1P10243 752 aa13.74□□□□□ -0.21
PTCD1-201ENST00000292478 STX1BP61266 288 aa13.74□□□□□ -0.21
PTCD1-201ENST00000292478 MMEL1Q495T6 779 aa13.74□□□□□ -0.21
PTCD1-201ENST00000292478 C12orf60Q5U649 245 aa13.74□□□□□ -0.21
PTCD1-201ENST00000292478 C2orf40Q9H1Z8 148 aa13.74□□□□□ -0.21
PTCD1-201ENST00000292478 DONSONQ9NYP3 566 aa13.74□□□□□ -0.21
PTCD1-201ENST00000292478 TLK1Q9UKI8 766 aa13.74□□□□□ -0.21
PTCD1-201ENST00000292478 GOLGA8IPA6NC78 632 aa13.74□□□□□ -0.21
PTCD1-201ENST00000292478 GOLGA8JA6NMD2 632 aa13.74□□□□□ -0.21
PTCD1-201ENST00000292478 PRR29P0C7W0 189 aa13.74□□□□□ -0.21
PTCD1-201ENST00000292478 ADGRF4Q8IZF3 695 aa13.74□□□□□ -0.21
PTCD1-201ENST00000292478 PIGOQ8TEQ8 1089 aa13.74□□□□□ -0.21
PTCD1-201ENST00000292478 TIPINQ9BVW5 301 aa13.74□□□□□ -0.21
PTCD1-201ENST00000292478 CCSER1Q9C0I3 900 aa13.74□□□□□ -0.21
PTCD1-201ENST00000292478 COPB2P35606 906 aa13.74□□□□□ -0.21
PTCD1-201ENST00000292478 QARSP47897 775 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms