RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 NLRP1Q9C000 1473 aa16.48■□□□□ 0.23
SHROOM4-201ENST00000289292 NPHP3-ACAD11A0A0J9YXS1 232 aa16.48■□□□□ 0.23
SHROOM4-201ENST00000289292 MYO1EQ12965 1108 aa16.48■□□□□ 0.23
SHROOM4-201ENST00000289292 MAP7D3Q8IWC1 876 aa16.48■□□□□ 0.23
SHROOM4-201ENST00000289292 COG1Q8WTW3 980 aa16.48■□□□□ 0.23
SHROOM4-201ENST00000289292 ANO9A1A5B4 782 aa16.48■□□□□ 0.23
SHROOM4-201ENST00000289292 SPDYE16A6NNV3 312 aaPredicted RBP16.48■□□□□ 0.23
SHROOM4-201ENST00000289292 RANBP1P43487 201 aa16.48■□□□□ 0.23
SHROOM4-201ENST00000289292 SPDYE2Q495Y8 402 aa16.48■□□□□ 0.23
SHROOM4-201ENST00000289292 SYT2Q8N9I0 419 aaPredicted RBP16.48■□□□□ 0.23
SHROOM4-201ENST00000289292 DNAAF3Q8N9W5 541 aa16.48■□□□□ 0.23
SHROOM4-201ENST00000289292 TGS1Q96RS0 853 aaKnown RBP16.48■□□□□ 0.23
SHROOM4-201ENST00000289292 KLC4Q9NSK0 619 aa16.48■□□□□ 0.23
SHROOM4-201ENST00000289292 SUFUQ9UMX1 484 aa16.48■□□□□ 0.23
SHROOM4-201ENST00000289292 GLI2P10070 1586 aa16.47■□□□□ 0.23
SHROOM4-201ENST00000289292 PNMA6FA0A0J9YX94 578 aa16.47■□□□□ 0.23
SHROOM4-201ENST00000289292 GYG2O15488 501 aa16.47■□□□□ 0.23
SHROOM4-201ENST00000289292 ZNF394Q53GI3 561 aa16.47■□□□□ 0.23
SHROOM4-201ENST00000289292 DACT3Q96B18 629 aaPredicted RBP16.47■□□□□ 0.23
SHROOM4-201ENST00000289292 CENPKQ9BS16 269 aa16.47■□□□□ 0.23
SHROOM4-201ENST00000289292 SLAIN2Q9P270 581 aa16.47■□□□□ 0.23
SHROOM4-201ENST00000289292 MROH7-TTC4A0A0A0MT08 1334 aa16.47■□□□□ 0.23
SHROOM4-201ENST00000289292 A0A0G2JLW4 131 aa16.47■□□□□ 0.23
SHROOM4-201ENST00000289292 POTEB3A0JP26 581 aa16.47■□□□□ 0.23
SHROOM4-201ENST00000289292 POTECB2RU33 542 aa16.47■□□□□ 0.23
SHROOM4-201ENST00000289292 ZSCAN20P17040 1043 aaPredicted RBP16.47■□□□□ 0.23
SHROOM4-201ENST00000289292 POLD1P28340 1107 aa16.47■□□□□ 0.23
SHROOM4-201ENST00000289292 POTEBQ6S5H4 581 aa16.47■□□□□ 0.23
SHROOM4-201ENST00000289292 CENPUQ71F23 418 aa16.47■□□□□ 0.23
SHROOM4-201ENST00000289292 TRAIPQ9BWF2 469 aa16.47■□□□□ 0.23
SHROOM4-201ENST00000289292 TAF1DQ9H5J8 278 aaPredicted RBP16.47■□□□□ 0.23
SHROOM4-201ENST00000289292 KANSL2Q9H9L4 492 aa16.47■□□□□ 0.23
SHROOM4-201ENST00000289292 PPARGC1AQ9UBK2 798 aaKnown RBP16.47■□□□□ 0.23
SHROOM4-201ENST00000289292 FBXO2Q9UK22 296 aaPredicted RBP16.47■□□□□ 0.23
SHROOM4-201ENST00000289292 TAF6LQ9Y6J9 622 aa16.47■□□□□ 0.23
SHROOM4-201ENST00000289292 TTC4O95801 387 aa16.47■□□□□ 0.23
SHROOM4-201ENST00000289292 SCARF1Q14162 830 aa16.47■□□□□ 0.23
SHROOM4-201ENST00000289292 FAM83BQ5T0W9 1011 aa16.47■□□□□ 0.23
SHROOM4-201ENST00000289292 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.47■□□□□ 0.23
SHROOM4-201ENST00000289292 ESYT2A0FGR8 921 aa16.47■□□□□ 0.23
SHROOM4-201ENST00000289292 CCDC188H7C350 402 aa16.47■□□□□ 0.23
SHROOM4-201ENST00000289292 PPFIA2O75334 1257 aa16.47■□□□□ 0.23
SHROOM4-201ENST00000289292 HSPA6P17066 643 aa16.47■□□□□ 0.23
SHROOM4-201ENST00000289292 PEX3P56589 373 aa16.47■□□□□ 0.23
SHROOM4-201ENST00000289292 SPARCL1Q14515 664 aa16.47■□□□□ 0.23
SHROOM4-201ENST00000289292 NKX1-1Q15270 411 aaPredicted RBP16.47■□□□□ 0.23
SHROOM4-201ENST00000289292 ADAM33Q9BZ11 813 aa16.47■□□□□ 0.23
SHROOM4-201ENST00000289292 MRPL47Q9HD33 250 aaKnown RBP16.47■□□□□ 0.23
SHROOM4-201ENST00000289292 GCLMP48507 274 aa16.47■□□□□ 0.23
SHROOM4-201ENST00000289292 KLK7P49862 253 aa16.47■□□□□ 0.23
SHROOM4-201ENST00000289292 MKRN4PQ13434 485 aaPredicted RBP16.47■□□□□ 0.23
SHROOM4-201ENST00000289292 SEPT2Q15019 361 aa16.47■□□□□ 0.23
SHROOM4-201ENST00000289292 FAM182BQ5T319 152 aa16.47■□□□□ 0.23
SHROOM4-201ENST00000289292 OR6B2Q6IFH4 312 aa16.47■□□□□ 0.23
SHROOM4-201ENST00000289292 SH3GLB2Q9NR46 395 aa16.47■□□□□ 0.23
SHROOM4-201ENST00000289292 ABCA8O94911 1581 aa16.46■□□□□ 0.23
SHROOM4-201ENST00000289292 NR3C1P04150 777 aa16.46■□□□□ 0.23
SHROOM4-201ENST00000289292 IL6STP40189 918 aaPredicted RBP16.46■□□□□ 0.23
SHROOM4-201ENST00000289292 FOXD4Q12950 439 aaPredicted RBP16.46■□□□□ 0.23
SHROOM4-201ENST00000289292 TRIM42Q8IWZ5 723 aa16.46■□□□□ 0.23
SHROOM4-201ENST00000289292 H0YCG3 227 aa16.46■□□□□ 0.23
SHROOM4-201ENST00000289292 PRPSAP1Q14558 356 aa16.46■□□□□ 0.23
SHROOM4-201ENST00000289292 ANKRD40Q6AI12 368 aa16.46■□□□□ 0.23
SHROOM4-201ENST00000289292 RGS9BPQ6ZS82 235 aa16.46■□□□□ 0.23
SHROOM4-201ENST00000289292 OR2W6PQ8NHA6 318 aa16.46■□□□□ 0.23
SHROOM4-201ENST00000289292 EPS15L1Q9UBC2 864 aa16.46■□□□□ 0.23
SHROOM4-201ENST00000289292 ADCY10Q96PN6 1610 aa16.46■□□□□ 0.23
SHROOM4-201ENST00000289292 ART3Q13508 389 aa16.46■□□□□ 0.23
SHROOM4-201ENST00000289292 SPATA4Q8NEY3 305 aa16.46■□□□□ 0.23
SHROOM4-201ENST00000289292 FAF2Q96CS3 445 aa16.46■□□□□ 0.23
SHROOM4-201ENST00000289292 SLC38A10Q9HBR0 1119 aa16.46■□□□□ 0.23
SHROOM4-201ENST00000289292 AMACRQ9UHK6 382 aa16.46■□□□□ 0.23
SHROOM4-201ENST00000289292 DCTN3O75935 186 aa16.46■□□□□ 0.23
SHROOM4-201ENST00000289292 STAT2P52630 851 aa16.46■□□□□ 0.23
SHROOM4-201ENST00000289292 C7orf31Q8N865 590 aa16.46■□□□□ 0.23
SHROOM4-201ENST00000289292 SDCCAG3Q96C92 435 aa16.46■□□□□ 0.23
SHROOM4-201ENST00000289292 BMP3P12645 472 aa16.46■□□□□ 0.22
SHROOM4-201ENST00000289292 ST13P4Q8IZP2 240 aaPredicted RBP16.46■□□□□ 0.22
SHROOM4-201ENST00000289292 FAM149B1Q96BN6 582 aa16.46■□□□□ 0.22
SHROOM4-201ENST00000289292 NUP85Q9BW27 656 aa16.46■□□□□ 0.22
SHROOM4-201ENST00000289292 OSBPL1AQ9BXW6 950 aa16.46■□□□□ 0.22
SHROOM4-201ENST00000289292 CNOT8Q9UFF9 292 aaKnown RBP16.46■□□□□ 0.22
SHROOM4-201ENST00000289292 KCNG1Q9UIX4 513 aa16.46■□□□□ 0.22
SHROOM4-201ENST00000289292 USP17L15C9J2P7 530 aa16.45■□□□□ 0.22
SHROOM4-201ENST00000289292 USP17L13C9JLJ4 530 aa16.45■□□□□ 0.22
SHROOM4-201ENST00000289292 USP17L11C9JVI0 530 aa16.45■□□□□ 0.22
SHROOM4-201ENST00000289292 USP17L18D6R9N7 530 aa16.45■□□□□ 0.22
SHROOM4-201ENST00000289292 USP17L22D6RA61 530 aa16.45■□□□□ 0.22
SHROOM4-201ENST00000289292 USP17L17D6RBQ6 530 aa16.45■□□□□ 0.22
SHROOM4-201ENST00000289292 USP17L19D6RCP7 530 aa16.45■□□□□ 0.22
SHROOM4-201ENST00000289292 USP17L20D6RJB6 530 aa16.45■□□□□ 0.22
SHROOM4-201ENST00000289292 TMPRSS15P98073 1019 aa16.45■□□□□ 0.22
SHROOM4-201ENST00000289292 USP17L24Q0WX57 530 aa16.45■□□□□ 0.22
SHROOM4-201ENST00000289292 SPOPLQ6IQ16 392 aa16.45■□□□□ 0.22
SHROOM4-201ENST00000289292 USP17L6PQ6QN14 398 aa16.45■□□□□ 0.22
SHROOM4-201ENST00000289292 PCGF5Q86SE9 256 aa16.45■□□□□ 0.22
SHROOM4-201ENST00000289292 INO80B-WBP1J3KQ70 363 aa16.45■□□□□ 0.22
SHROOM4-201ENST00000289292 PODXLO00592 558 aa16.45■□□□□ 0.22
SHROOM4-201ENST00000289292 MIGA2Q7L4E1 593 aa16.45■□□□□ 0.22
SHROOM4-201ENST00000289292 CCHCR1Q8TD31 782 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms