RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 OR6J1Q8NGC5 347 aa9.36□□□□□ -0.91
PTPDC1-201ENST00000288976 RAET1EQ8TD07 263 aa9.36□□□□□ -0.91
PTPDC1-201ENST00000288976 LRRC15Q8TF66 581 aa9.36□□□□□ -0.91
PTPDC1-201ENST00000288976 BBXQ8WY36 941 aaPredicted RBP9.36□□□□□ -0.91
PTPDC1-201ENST00000288976 AZI2Q9H6S1 392 aa9.36□□□□□ -0.91
PTPDC1-201ENST00000288976 POTEFA5A3E0 1075 aa9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 ZEB2O60315 1214 aa9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 PPFIA4O75335 1185 aa9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 OATP04181 439 aa9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 CNGA1P29973 690 aa9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 YWHABP31946 246 aaKnown RBP9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 RFC5P40937 340 aa9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 PSMD2Q13200 908 aa9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 PKN2Q16513 984 aaKnown RBP9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 BRDTQ58F21 947 aaPredicted RBP9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 POTEGQ6S5H5 508 aa9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 ZFP91Q96JP5 570 aaPredicted RBP9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 ZNF215Q9UL58 517 aaPredicted RBP9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 GAS2O43903 313 aaKnown RBP9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 NEFHP12036 1026 aa9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 ABCD1P33897 745 aa9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 CAP1Q01518 475 aa9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 DGKDQ16760 1214 aa9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 LRSAM1Q6UWE0 723 aa9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 CCDC60Q8IWA6 550 aaPredicted RBP9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 BANK1Q8NDB2 785 aa9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 SMARCE1Q969G3 411 aa9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 PCYT2Q99447 389 aa9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 PTPN22Q9Y2R2 807 aa9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 SDK1Q7Z5N4 2213 aa9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 GAP43P17677 238 aa9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 CTTNQ14247 550 aaKnown RBP9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 TLK2Q86UE8 772 aa9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 TPH2Q8IWU9 490 aa9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 TRPV1Q8NER1 839 aa9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 BPIFA3Q9BQP9 254 aa9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 FUCA2Q9BTY2 467 aa9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 SEZ6LQ9BYH1 1024 aa9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 TRIM9Q9C026 710 aa9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 NRBP2Q9NSY0 501 aa9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 GABBR1Q9UBS5 961 aa9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 KCNG1Q9UIX4 513 aa9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 UBE4BO95155 1302 aa9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 MAPTP10636 758 aaKnown RBP9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 CDC25AP30304 524 aa9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 USP8P40818 1118 aa9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 RTP1P59025 263 aa9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 STX1AQ16623 288 aa9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 FOXR2Q6PJQ5 311 aa9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 UNC13DQ70J99 1090 aa9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 EEPD1Q7L9B9 569 aa9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 KATNAL1Q9BW62 490 aa9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 WRAP73Q9P2S5 460 aaPredicted RBP9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 DACH1Q9UI36 760 aa9.35□□□□□ -0.91
PTPDC1-201ENST00000288976 CYP2C19P33261 490 aa9.34□□□□□ -0.91
PTPDC1-201ENST00000288976 PRKCEQ02156 737 aa9.34□□□□□ -0.91
PTPDC1-201ENST00000288976 CACNB2Q08289 660 aaPredicted RBP9.34□□□□□ -0.91
PTPDC1-201ENST00000288976 UGCGQ16739 394 aa9.34□□□□□ -0.91
PTPDC1-201ENST00000288976 CCDC70Q6NSX1 233 aa9.34□□□□□ -0.91
PTPDC1-201ENST00000288976 AP5M1Q9H0R1 490 aa9.34□□□□□ -0.91
PTPDC1-201ENST00000288976 DEF6Q9H4E7 631 aa9.34□□□□□ -0.91
PTPDC1-201ENST00000288976 ERAP1Q9NZ08 941 aa9.34□□□□□ -0.91
PTPDC1-201ENST00000288976 RGL1Q9NZL6 768 aa9.34□□□□□ -0.91
PTPDC1-201ENST00000288976 CNTRLQ7Z7A1 2325 aa9.34□□□□□ -0.91
PTPDC1-201ENST00000288976 PHLPP2Q6ZVD8 1323 aa9.34□□□□□ -0.91
PTPDC1-201ENST00000288976 RHOBTB3O94955 611 aa9.34□□□□□ -0.91
PTPDC1-201ENST00000288976 CCDC192P0DO97 292 aa9.34□□□□□ -0.91
PTPDC1-201ENST00000288976 HSPA8P11142 646 aaKnown RBP9.34□□□□□ -0.91
PTPDC1-201ENST00000288976 STAT5BP51692 787 aa9.34□□□□□ -0.91
PTPDC1-201ENST00000288976 EHHADHQ08426 723 aa9.34□□□□□ -0.91
PTPDC1-201ENST00000288976 MORC3Q14149 939 aa9.34□□□□□ -0.91
PTPDC1-201ENST00000288976 SWSAP1Q6NVH7 229 aa9.34□□□□□ -0.91
PTPDC1-201ENST00000288976 KCNK18Q7Z418 384 aa9.34□□□□□ -0.91
PTPDC1-201ENST00000288976 ATP8B4Q8TF62 1192 aa9.34□□□□□ -0.91
PTPDC1-201ENST00000288976 JPH2Q9BR39 696 aaPredicted RBP9.34□□□□□ -0.91
PTPDC1-201ENST00000288976 SEL1LQ9UBV2 794 aa9.34□□□□□ -0.91
PTPDC1-201ENST00000288976 MYH9P35579 1960 aaKnown RBP9.34□□□□□ -0.91
PTPDC1-201ENST00000288976 E9PMD0 336 aa9.34□□□□□ -0.91
PTPDC1-201ENST00000288976 LGALS2P05162 132 aa9.34□□□□□ -0.91
PTPDC1-201ENST00000288976 NLRP12P59046 1061 aa9.34□□□□□ -0.91
PTPDC1-201ENST00000288976 CCDC173Q0VFZ6 552 aa9.34□□□□□ -0.91
PTPDC1-201ENST00000288976 PNOCQ13519 176 aa9.34□□□□□ -0.91
PTPDC1-201ENST00000288976 MCM6Q14566 821 aa9.34□□□□□ -0.91
PTPDC1-201ENST00000288976 ZNF484Q5JVG2 852 aa9.34□□□□□ -0.91
PTPDC1-201ENST00000288976 TCERG1LQ5VWI1 586 aa9.34□□□□□ -0.91
PTPDC1-201ENST00000288976 MTRQ99707 1265 aa9.34□□□□□ -0.91
PTPDC1-201ENST00000288976 C17orf75Q9HAS0 396 aa9.34□□□□□ -0.91
PTPDC1-201ENST00000288976 ADCY6O43306 1168 aa9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 RPN1P04843 607 aaKnown RBP9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 RARBP10826 455 aa9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 CYP11B2P19099 503 aa9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 ZNF131P52739 623 aa9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 C1orf186Q6ZWK4 172 aa9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 GPBP1Q86WP2 473 aa9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 TSEN34Q9BSV6 310 aaKnown RBP9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 ANO10Q9NW15 660 aa9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 DDX20Q9UHI6 824 aaKnown RBP9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 PUF60Q9UHX1 559 aaKnown RBP9.33□□□□□ -0.92
PTPDC1-201ENST00000288976 ARHGEF35A5YM69 484 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms