RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 PP2D1A8MPX8 630 aa22.26■■□□□ 1.15
TIMP4-201ENST00000287814 CTSHP09668 335 aa22.26■■□□□ 1.15
TIMP4-201ENST00000287814 PPIGQ13427 754 aaKnown RBP eCLIP22.26■■□□□ 1.15
TIMP4-201ENST00000287814 PDIA5Q14554 519 aa22.26■■□□□ 1.15
TIMP4-201ENST00000287814 TMEM266Q2M3C6 531 aa22.26■■□□□ 1.15
TIMP4-201ENST00000287814 MTERF2Q49AM1 385 aa22.26■■□□□ 1.15
TIMP4-201ENST00000287814 DTHD1Q6ZMT9 781 aa22.26■■□□□ 1.15
TIMP4-201ENST00000287814 DEFB128Q7Z7B8 93 aa22.26■■□□□ 1.15
TIMP4-201ENST00000287814 CEP131Q9UPN4 1083 aa22.26■■□□□ 1.15
TIMP4-201ENST00000287814 NBNO60934 754 aa22.26■■□□□ 1.15
TIMP4-201ENST00000287814 CHRNA1P02708 482 aa22.26■■□□□ 1.15
TIMP4-201ENST00000287814 CDC25AP30304 524 aa22.26■■□□□ 1.15
TIMP4-201ENST00000287814 PTPAQ15257 358 aa22.26■■□□□ 1.15
TIMP4-201ENST00000287814 SHHQ15465 462 aa22.26■■□□□ 1.15
TIMP4-201ENST00000287814 KIAA0319LQ8IZA0 1049 aa22.26■■□□□ 1.15
TIMP4-201ENST00000287814 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.26■■□□□ 1.15
TIMP4-201ENST00000287814 IL23AQ9NPF7 189 aa22.26■■□□□ 1.15
TIMP4-201ENST00000287814 LRWD1Q9UFC0 647 aa22.26■■□□□ 1.15
TIMP4-201ENST00000287814 SMIM35A0A1B0GVV1 85 aa22.25■■□□□ 1.15
TIMP4-201ENST00000287814 RSPH10B2B2RC85 870 aa22.25■■□□□ 1.15
TIMP4-201ENST00000287814 DKC1O60832 514 aaKnown RBP eCLIP22.25■■□□□ 1.15
TIMP4-201ENST00000287814 LYPLA2O95372 231 aa22.25■■□□□ 1.15
TIMP4-201ENST00000287814 RSPH10BP0C881 870 aa22.25■■□□□ 1.15
TIMP4-201ENST00000287814 YWHABP31946 246 aaKnown RBP22.25■■□□□ 1.15
TIMP4-201ENST00000287814 CEBPZQ03701 1054 aaKnown RBP22.25■■□□□ 1.15
TIMP4-201ENST00000287814 ECM1Q16610 540 aa22.25■■□□□ 1.15
TIMP4-201ENST00000287814 TMEM240Q5SV17 173 aa22.25■■□□□ 1.15
TIMP4-201ENST00000287814 NEK9Q8TD19 979 aa22.25■■□□□ 1.15
TIMP4-201ENST00000287814 USP28Q96RU2 1077 aa22.25■■□□□ 1.15
TIMP4-201ENST00000287814 ZDHHC9Q9Y397 364 aa22.25■■□□□ 1.15
TIMP4-201ENST00000287814 SCN5AQ14524 2016 aa22.25■■□□□ 1.15
TIMP4-201ENST00000287814 F13A1P00488 732 aa22.24■■□□□ 1.15
TIMP4-201ENST00000287814 PDIA4P13667 645 aaKnown RBP22.24■■□□□ 1.15
TIMP4-201ENST00000287814 GRIN1Q05586 938 aa22.24■■□□□ 1.15
TIMP4-201ENST00000287814 MGAT3Q09327 533 aa22.24■■□□□ 1.15
TIMP4-201ENST00000287814 TMEM62Q0P6H9 643 aa22.24■■□□□ 1.15
TIMP4-201ENST00000287814 FAM26DQ5JW98 314 aa22.24■■□□□ 1.15
TIMP4-201ENST00000287814 ARL6IP4Q66PJ3 421 aaKnown RBP22.24■■□□□ 1.15
TIMP4-201ENST00000287814 ZNF365Q70YC5 407 aa22.24■■□□□ 1.15
TIMP4-201ENST00000287814 LRRC71Q8N4P6 559 aa22.24■■□□□ 1.15
TIMP4-201ENST00000287814 LINC01465Q8N7H1 131 aa22.24■■□□□ 1.15
TIMP4-201ENST00000287814 POLR3CQ9BUI4 534 aaPredicted RBP22.24■■□□□ 1.15
TIMP4-201ENST00000287814 CYP26B1Q9NR63 512 aa22.24■■□□□ 1.15
TIMP4-201ENST00000287814 VWA3AA6NCI4 1184 aa22.23■■□□□ 1.15
TIMP4-201ENST00000287814 CAND2O75155 1236 aa22.23■■□□□ 1.15
TIMP4-201ENST00000287814 RPA1P27694 616 aa22.23■■□□□ 1.15
TIMP4-201ENST00000287814 EFCAB12Q6NXP0 572 aa22.23■■□□□ 1.15
TIMP4-201ENST00000287814 METTL13Q8N6R0 699 aa22.23■■□□□ 1.15
TIMP4-201ENST00000287814 PIGOQ8TEQ8 1089 aa22.23■■□□□ 1.15
TIMP4-201ENST00000287814 MMTAG2Q9BU76 263 aaKnown RBP22.23■■□□□ 1.15
TIMP4-201ENST00000287814 TUFT1Q9NNX1 390 aa22.23■■□□□ 1.15
TIMP4-201ENST00000287814 LAMA2P24043 3122 aaKnown RBP22.23■■□□□ 1.15
TIMP4-201ENST00000287814 MAGEB2O15479 319 aa22.23■■□□□ 1.15
TIMP4-201ENST00000287814 CLCN3P51790 818 aa22.23■■□□□ 1.15
TIMP4-201ENST00000287814 TBC1D8BQ0IIM8 1120 aa22.23■■□□□ 1.15
TIMP4-201ENST00000287814 MKRN4PQ13434 485 aaPredicted RBP22.23■■□□□ 1.15
TIMP4-201ENST00000287814 DRP2Q13474 957 aa22.23■■□□□ 1.15
TIMP4-201ENST00000287814 TCTN1Q2MV58 587 aa22.23■■□□□ 1.15
TIMP4-201ENST00000287814 FOXD4L6Q3SYB3 417 aaPredicted RBP22.23■■□□□ 1.15
TIMP4-201ENST00000287814 FOXD4L3Q6VB84 417 aaPredicted RBP22.23■■□□□ 1.15
TIMP4-201ENST00000287814 CEP170P1Q96L14 293 aa22.23■■□□□ 1.15
TIMP4-201ENST00000287814 TANC1Q9C0D5 1861 aa22.22■■□□□ 1.15
TIMP4-201ENST00000287814 IGKV6-21A0A0C4DH24 114 aa22.22■■□□□ 1.15
TIMP4-201ENST00000287814 BRD1O95696 1058 aa22.22■■□□□ 1.15
TIMP4-201ENST00000287814 BMP15O95972 392 aa22.22■■□□□ 1.15
TIMP4-201ENST00000287814 CXCL10P02778 98 aa22.22■■□□□ 1.15
TIMP4-201ENST00000287814 RFC2P35250 354 aa22.22■■□□□ 1.15
TIMP4-201ENST00000287814 POTEGQ6S5H5 508 aa22.22■■□□□ 1.15
TIMP4-201ENST00000287814 RSPH3Q86UC2 560 aa22.22■■□□□ 1.15
TIMP4-201ENST00000287814 RPUSD2Q8IZ73 545 aaKnown RBP22.22■■□□□ 1.15
TIMP4-201ENST00000287814 TDHQ8IZJ6 230 aa22.22■■□□□ 1.15
TIMP4-201ENST00000287814 ERMNQ8TAM6 284 aa22.22■■□□□ 1.15
TIMP4-201ENST00000287814 SUGCTQ9HAC7 445 aa22.22■■□□□ 1.15
TIMP4-201ENST00000287814 TFIP11Q9UBB9 837 aaKnown RBP22.22■■□□□ 1.15
TIMP4-201ENST00000287814 CDY2AQ9Y6F7 541 aa22.22■■□□□ 1.15
TIMP4-201ENST00000287814 TET1Q8NFU7 2136 aa22.21■■□□□ 1.15
TIMP4-201ENST00000287814 MARCKSP29966 332 aaPredicted RBP22.21■■□□□ 1.15
TIMP4-201ENST00000287814 CCT6AP40227 531 aaKnown RBP22.21■■□□□ 1.15
TIMP4-201ENST00000287814 MRPS6P82932 125 aaKnown RBP22.21■■□□□ 1.15
TIMP4-201ENST00000287814 OTUD6AQ7L8S5 288 aa22.21■■□□□ 1.15
TIMP4-201ENST00000287814 NME8Q8N427 588 aa22.21■■□□□ 1.15
TIMP4-201ENST00000287814 SNX29Q8TEQ0 813 aa22.21■■□□□ 1.15
TIMP4-201ENST00000287814 RAB34Q9BZG1 259 aa22.21■■□□□ 1.15
TIMP4-201ENST00000287814 CDHR5Q9HBB8 845 aa22.21■■□□□ 1.15
TIMP4-201ENST00000287814 MAFO75444 373 aaPredicted RBP22.2■■□□□ 1.15
TIMP4-201ENST00000287814 FGBP02675 491 aa22.2■■□□□ 1.15
TIMP4-201ENST00000287814 VTNP04004 478 aa22.2■■□□□ 1.15
TIMP4-201ENST00000287814 XKR9Q5GH70 373 aa22.2■■□□□ 1.15
TIMP4-201ENST00000287814 OTOP2Q7RTS6 562 aa22.2■■□□□ 1.15
TIMP4-201ENST00000287814 ANKEF1Q9NU02 776 aa22.2■■□□□ 1.15
TIMP4-201ENST00000287814 DAXXQ9UER7 740 aaPredicted RBP22.2■■□□□ 1.15
TIMP4-201ENST00000287814 EVPLQ92817 2033 aa22.2■■□□□ 1.14
TIMP4-201ENST00000287814 TRIOBPQ9H2D6 2365 aa22.2■■□□□ 1.14
TIMP4-201ENST00000287814 PARNO95453 639 aaKnown RBP22.2■■□□□ 1.14
TIMP4-201ENST00000287814 RARRES1P49788 294 aa22.2■■□□□ 1.14
TIMP4-201ENST00000287814 HAUS3Q68CZ6 603 aa22.2■■□□□ 1.14
TIMP4-201ENST00000287814 PPP1R16BQ96T49 567 aa22.2■■□□□ 1.14
TIMP4-201ENST00000287814 DHX33Q9H6R0 707 aaKnown RBP22.2■■□□□ 1.14
TIMP4-201ENST00000287814 BMP2KQ9NSY1 1161 aaPredicted RBP22.2■■□□□ 1.14
TIMP4-201ENST00000287814 CXXC1Q9P0U4 656 aaPredicted RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms