RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 DAXXQ9UER7 740 aaPredicted RBP7.32□□□□□ -1.24
CD44-204ENST00000279452 LRWD1Q9UFC0 647 aa7.32□□□□□ -1.24
CD44-204ENST00000279452 SCN10AQ9Y5Y9 1956 aa7.31□□□□□ -1.24
CD44-204ENST00000279452 SMIM35A0A1B0GVV1 85 aa7.31□□□□□ -1.24
CD44-204ENST00000279452 VWA3AA6NCI4 1184 aa7.31□□□□□ -1.24
CD44-204ENST00000279452 LAD1O00515 517 aa7.31□□□□□ -1.24
CD44-204ENST00000279452 CAND2O75155 1236 aa7.31□□□□□ -1.24
CD44-204ENST00000279452 C22orf31O95567 290 aa7.31□□□□□ -1.24
CD44-204ENST00000279452 VTNP04004 478 aa7.31□□□□□ -1.24
CD44-204ENST00000279452 PFKMP08237 780 aa7.31□□□□□ -1.24
CD44-204ENST00000279452 GHRP10912 638 aa7.31□□□□□ -1.24
CD44-204ENST00000279452 TMOD1P28289 359 aa7.31□□□□□ -1.24
CD44-204ENST00000279452 HOXC8P31273 242 aa7.31□□□□□ -1.24
CD44-204ENST00000279452 BMP8BP34820 402 aa7.31□□□□□ -1.24
CD44-204ENST00000279452 KCNJ6P48051 423 aa7.31□□□□□ -1.24
CD44-204ENST00000279452 DNM2P50570 870 aa7.31□□□□□ -1.24
CD44-204ENST00000279452 MRPS6P82932 125 aaKnown RBP7.31□□□□□ -1.24
CD44-204ENST00000279452 SPIRE1Q08AE8 756 aa7.31□□□□□ -1.24
CD44-204ENST00000279452 RESTQ13127 1097 aa7.31□□□□□ -1.24
CD44-204ENST00000279452 XKR9Q5GH70 373 aa7.31□□□□□ -1.24
CD44-204ENST00000279452 HABP4Q5JVS0 413 aaKnown RBP7.31□□□□□ -1.24
CD44-204ENST00000279452 MARCH8Q5T0T0 291 aa7.31□□□□□ -1.24
CD44-204ENST00000279452 IER5Q5VY09 327 aa7.31□□□□□ -1.24
CD44-204ENST00000279452 KRT79Q5XKE5 535 aa7.31□□□□□ -1.24
CD44-204ENST00000279452 EFCAB12Q6NXP0 572 aa7.31□□□□□ -1.24
CD44-204ENST00000279452 FAM173BQ6P4H8 233 aa7.31□□□□□ -1.24
CD44-204ENST00000279452 B3GNT9Q6UX72 402 aa7.31□□□□□ -1.24
CD44-204ENST00000279452 OTUD6AQ7L8S5 288 aa7.31□□□□□ -1.24
CD44-204ENST00000279452 SLC7A3Q8WY07 619 aa7.31□□□□□ -1.24
CD44-204ENST00000279452 CDK5RAP3Q96JB5 506 aa7.31□□□□□ -1.24
CD44-204ENST00000279452 ZNF668Q96K58 619 aaPredicted RBP7.31□□□□□ -1.24
CD44-204ENST00000279452 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.31□□□□□ -1.24
CD44-204ENST00000279452 MTMR6Q9Y217 621 aa7.31□□□□□ -1.24
CD44-204ENST00000279452 PCDHA2Q9Y5H9 948 aa7.31□□□□□ -1.24
CD44-204ENST00000279452 TRPV2Q9Y5S1 764 aa7.31□□□□□ -1.24
CD44-204ENST00000279452 CDY2AQ9Y6F7 541 aa7.31□□□□□ -1.24
CD44-204ENST00000279452 A0A087WWV3 80 aa7.3□□□□□ -1.24
CD44-204ENST00000279452 A0A1W2PPC1 479 aa7.3□□□□□ -1.24
CD44-204ENST00000279452 MBLAC1A4D2B0 266 aaPredicted RBP7.3□□□□□ -1.24
CD44-204ENST00000279452 PP2D1A8MPX8 630 aa7.3□□□□□ -1.24
CD44-204ENST00000279452 RBAK-RBAKDNI3L0D1 243 aa7.3□□□□□ -1.24
CD44-204ENST00000279452 MAGEB2O15479 319 aa7.3□□□□□ -1.24
CD44-204ENST00000279452 USO1O60763 962 aaKnown RBP7.3□□□□□ -1.24
CD44-204ENST00000279452 NBNO60934 754 aa7.3□□□□□ -1.24
CD44-204ENST00000279452 PARNO95453 639 aaKnown RBP7.3□□□□□ -1.24
CD44-204ENST00000279452 BMP15O95972 392 aa7.3□□□□□ -1.24
CD44-204ENST00000279452 RPLP2P05387 115 aaKnown RBP7.3□□□□□ -1.24
CD44-204ENST00000279452 ZSCAN22P10073 491 aaPredicted RBP7.3□□□□□ -1.24
CD44-204ENST00000279452 NCLP19338 710 aaKnown RBP7.3□□□□□ -1.24
CD44-204ENST00000279452 ANP32AP39687 249 aaKnown RBP7.3□□□□□ -1.24
CD44-204ENST00000279452 FXR2P51116 673 aaKnown RBP eCLIP7.3□□□□□ -1.24
CD44-204ENST00000279452 NPEPPSP55786 919 aa7.3□□□□□ -1.24
CD44-204ENST00000279452 ADAM17P78536 824 aa7.3□□□□□ -1.24
CD44-204ENST00000279452 ATP2C1P98194 919 aaPredicted RBP7.3□□□□□ -1.24
CD44-204ENST00000279452 RBL2Q08999 1139 aa7.3□□□□□ -1.24
CD44-204ENST00000279452 STK38Q15208 465 aa7.3□□□□□ -1.24
CD44-204ENST00000279452 SF3A1Q15459 793 aaKnown RBP7.3□□□□□ -1.24
CD44-204ENST00000279452 KIZQ2M2Z5 673 aa7.3□□□□□ -1.24
CD44-204ENST00000279452 TRIM71Q2Q1W2 868 aaKnown RBP7.3□□□□□ -1.24
CD44-204ENST00000279452 TMEM240Q5SV17 173 aa7.3□□□□□ -1.24
CD44-204ENST00000279452 CNKSR3Q6P9H4 555 aa7.3□□□□□ -1.24
CD44-204ENST00000279452 POTEGQ6S5H5 508 aa7.3□□□□□ -1.24
CD44-204ENST00000279452 ANO5Q75V66 913 aa7.3□□□□□ -1.24
CD44-204ENST00000279452 C4orf19Q8IY42 314 aa7.3□□□□□ -1.24
CD44-204ENST00000279452 PIGOQ8TEQ8 1089 aa7.3□□□□□ -1.24
CD44-204ENST00000279452 NLRP7Q8WX94 980 aa7.3□□□□□ -1.24
CD44-204ENST00000279452 SEPT8Q92599 483 aa7.3□□□□□ -1.24
CD44-204ENST00000279452 NLRP4Q96MN2 994 aa7.3□□□□□ -1.24
CD44-204ENST00000279452 IFIH1Q9BYX4 1025 aaKnown RBP7.3□□□□□ -1.24
CD44-204ENST00000279452 ZSCAN16Q9H4T2 348 aaPredicted RBP7.3□□□□□ -1.24
CD44-204ENST00000279452 CYP26B1Q9NR63 512 aa7.3□□□□□ -1.24
CD44-204ENST00000279452 WRAP73Q9P2S5 460 aaPredicted RBP7.3□□□□□ -1.24
CD44-204ENST00000279452 SLC4A7Q9Y6M7 1214 aa7.3□□□□□ -1.24
CD44-204ENST00000279452 ARHGEF35A5YM69 484 aa7.29□□□□□ -1.24
CD44-204ENST00000279452 ZBTB42B2RXF5 422 aa7.29□□□□□ -1.24
CD44-204ENST00000279452 ZBTB39O15060 712 aa7.29□□□□□ -1.24
CD44-204ENST00000279452 MED24O75448 989 aa7.29□□□□□ -1.24
CD44-204ENST00000279452 SLITRK3O94933 977 aa7.29□□□□□ -1.24
CD44-204ENST00000279452 F13A1P00488 732 aa7.29□□□□□ -1.24
CD44-204ENST00000279452 CHRNA1P02708 482 aa7.29□□□□□ -1.24
CD44-204ENST00000279452 SSBP05455 408 aaKnown RBP eCLIP7.29□□□□□ -1.24
CD44-204ENST00000279452 MARCKSP29966 332 aaPredicted RBP7.29□□□□□ -1.24
CD44-204ENST00000279452 CDC25AP30304 524 aa7.29□□□□□ -1.24
CD44-204ENST00000279452 RFC5P40937 340 aa7.29□□□□□ -1.24
CD44-204ENST00000279452 PRPHP41219 470 aa7.29□□□□□ -1.24
CD44-204ENST00000279452 NLRP11P59045 1033 aaKnown RBP7.29□□□□□ -1.24
CD44-204ENST00000279452 NFX1Q12986 1120 aaKnown RBP7.29□□□□□ -1.24
CD44-204ENST00000279452 PAK2Q13177 524 aa7.29□□□□□ -1.24
CD44-204ENST00000279452 IKBKEQ14164 716 aa7.29□□□□□ -1.24
CD44-204ENST00000279452 MBTPS1Q14703 1052 aa7.29□□□□□ -1.24
CD44-204ENST00000279452 EMC2Q15006 297 aa7.29□□□□□ -1.24
CD44-204ENST00000279452 FAM117BQ6P1L5 589 aa7.29□□□□□ -1.24
CD44-204ENST00000279452 C16orf59Q7L2K0 433 aa7.29□□□□□ -1.24
CD44-204ENST00000279452 MAEAQ7L5Y9 396 aa7.29□□□□□ -1.24
CD44-204ENST00000279452 CATSPER3Q86XQ3 398 aa7.29□□□□□ -1.24
CD44-204ENST00000279452 RHPN2Q8IUC4 686 aa7.29□□□□□ -1.24
CD44-204ENST00000279452 DBF4BQ8NFT6 615 aa7.29□□□□□ -1.24
CD44-204ENST00000279452 ZNF396Q96N95 335 aaPredicted RBP7.29□□□□□ -1.24
CD44-204ENST00000279452 PLIN2Q99541 437 aa7.29□□□□□ -1.24
CD44-204ENST00000279452 OSMRQ99650 979 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms