RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 GJB7Q6PEY0 223 aa13.91□□□□□ -0.18
HERC6-202ENST00000273960 HOOK3Q86VS8 718 aa13.91□□□□□ -0.18
HERC6-202ENST00000273960 FBF1Q8TES7 1133 aa13.91□□□□□ -0.18
HERC6-202ENST00000273960 RNF25Q96BH1 459 aaPredicted RBP13.91□□□□□ -0.18
HERC6-202ENST00000273960 NSRP1Q9H0G5 558 aaKnown RBP13.91□□□□□ -0.18
HERC6-202ENST00000273960 NUCKS1Q9H1E3 243 aaKnown RBP13.91□□□□□ -0.18
HERC6-202ENST00000273960 KBTBD4Q9NVX7 518 aa13.91□□□□□ -0.18
HERC6-202ENST00000273960 A0A1W2PQJ5 194 aa13.91□□□□□ -0.18
HERC6-202ENST00000273960 MYMKA6NI61 221 aa13.91□□□□□ -0.18
HERC6-202ENST00000273960 SERPING1P05155 500 aa13.91□□□□□ -0.18
HERC6-202ENST00000273960 VPS41P49754 854 aa13.91□□□□□ -0.18
HERC6-202ENST00000273960 CNNM4Q6P4Q7 775 aa13.91□□□□□ -0.18
HERC6-202ENST00000273960 ARMC9Q7Z3E5 817 aa13.91□□□□□ -0.18
HERC6-202ENST00000273960 FITM2Q8N6M3 262 aa13.91□□□□□ -0.18
HERC6-202ENST00000273960 UCMAQ8WVF2 138 aa13.91□□□□□ -0.18
HERC6-202ENST00000273960 OSGEPQ9NPF4 335 aa13.91□□□□□ -0.18
HERC6-202ENST00000273960 RNF14Q9UBS8 474 aa13.91□□□□□ -0.18
HERC6-202ENST00000273960 SUGT1Q9Y2Z0 365 aa13.91□□□□□ -0.18
HERC6-202ENST00000273960 ATP6V0A2Q9Y487 856 aa13.91□□□□□ -0.18
HERC6-202ENST00000273960 STXBP3O00186 592 aa13.9□□□□□ -0.18
HERC6-202ENST00000273960 PLCG2P16885 1265 aa13.9□□□□□ -0.18
HERC6-202ENST00000273960 UBE4AQ14139 1066 aa13.9□□□□□ -0.18
HERC6-202ENST00000273960 TPTE2Q6XPS3 522 aa13.9□□□□□ -0.18
HERC6-202ENST00000273960 TTC8Q8TAM2 541 aa13.9□□□□□ -0.18
HERC6-202ENST00000273960 NEK9Q8TD19 979 aa13.9□□□□□ -0.18
HERC6-202ENST00000273960 DDX50Q9BQ39 737 aaKnown RBP13.9□□□□□ -0.18
HERC6-202ENST00000273960 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.9□□□□□ -0.18
HERC6-202ENST00000273960 PYM1Q9BRP8 204 aaKnown RBP13.9□□□□□ -0.18
HERC6-202ENST00000273960 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.9□□□□□ -0.18
HERC6-202ENST00000273960 CNTNAP5Q8WYK1 1306 aa13.9□□□□□ -0.18
HERC6-202ENST00000273960 POTEMA6NI47 508 aa13.9□□□□□ -0.18
HERC6-202ENST00000273960 G3V3G9 751 aa13.9□□□□□ -0.18
HERC6-202ENST00000273960 RPS8P62241 208 aaKnown RBP13.9□□□□□ -0.18
HERC6-202ENST00000273960 SLC18A3Q16572 532 aa13.9□□□□□ -0.18
HERC6-202ENST00000273960 MUM1Q2TAK8 710 aa13.9□□□□□ -0.18
HERC6-202ENST00000273960 DCAF8Q5TAQ9 597 aa13.9□□□□□ -0.18
HERC6-202ENST00000273960 ATXN2LQ8WWM7 1075 aaKnown RBP13.9□□□□□ -0.18
HERC6-202ENST00000273960 CNOT10Q9H9A5 744 aaKnown RBP13.9□□□□□ -0.18
HERC6-202ENST00000273960 HAO1Q9UJM8 370 aa13.9□□□□□ -0.18
HERC6-202ENST00000273960 USP15Q9Y4E8 981 aaPredicted RBP13.9□□□□□ -0.18
HERC6-202ENST00000273960 MYO5AQ9Y4I1 1855 aaKnown RBP13.9□□□□□ -0.18
HERC6-202ENST00000273960 SLC9A1P19634 815 aa13.89□□□□□ -0.19
HERC6-202ENST00000273960 CDK17Q00537 523 aa13.89□□□□□ -0.19
HERC6-202ENST00000273960 ZNF268Q14587 947 aaPredicted RBP13.89□□□□□ -0.19
HERC6-202ENST00000273960 CCDC6Q16204 474 aa13.89□□□□□ -0.19
HERC6-202ENST00000273960 ANO7Q6IWH7 933 aa13.89□□□□□ -0.19
HERC6-202ENST00000273960 ALKBH5Q6P6C2 394 aaKnown RBP13.89□□□□□ -0.19
HERC6-202ENST00000273960 FAM196AQ6ZSG2 479 aa13.89□□□□□ -0.19
HERC6-202ENST00000273960 SV2BQ7L1I2 683 aa13.89□□□□□ -0.19
HERC6-202ENST00000273960 C4orf32Q8N8J7 132 aa13.89□□□□□ -0.19
HERC6-202ENST00000273960 NUDCD1Q96RS6 583 aa13.89□□□□□ -0.19
HERC6-202ENST00000273960 STX8Q9UNK0 236 aa13.89□□□□□ -0.19
HERC6-202ENST00000273960 USH1CQ9Y6N9 552 aa13.89□□□□□ -0.19
HERC6-202ENST00000273960 SCN11AQ9UI33 1791 aa13.89□□□□□ -0.19
HERC6-202ENST00000273960 PHRF1Q9P1Y6 1649 aaKnown RBP13.89□□□□□ -0.19
HERC6-202ENST00000273960 ABCC12Q96J65 1359 aa13.89□□□□□ -0.19
HERC6-202ENST00000273960 CFAP73A6NFT4 308 aa13.89□□□□□ -0.19
HERC6-202ENST00000273960 PJA2O43164 708 aa13.89□□□□□ -0.19
HERC6-202ENST00000273960 SNX3O60493 162 aa13.89□□□□□ -0.19
HERC6-202ENST00000273960 ENTPD5O75356 428 aa13.89□□□□□ -0.19
HERC6-202ENST00000273960 SUN1O94901 812 aa13.89□□□□□ -0.19
HERC6-202ENST00000273960 YY1P25490 414 aa13.89□□□□□ -0.19
HERC6-202ENST00000273960 TRAF1Q13077 416 aa13.89□□□□□ -0.19
HERC6-202ENST00000273960 ASTE1Q2TB18 679 aaPredicted RBP13.89□□□□□ -0.19
HERC6-202ENST00000273960 EMC10Q5UCC4 262 aa13.89□□□□□ -0.19
HERC6-202ENST00000273960 CRELD2Q6UXH1 353 aaPredicted RBP13.89□□□□□ -0.19
HERC6-202ENST00000273960 LMNTD2Q8IXW0 634 aa13.89□□□□□ -0.19
HERC6-202ENST00000273960 DTX3LQ8TDB6 740 aa13.89□□□□□ -0.19
HERC6-202ENST00000273960 FGFBP2Q9BYJ0 223 aa13.89□□□□□ -0.19
HERC6-202ENST00000273960 ERVK-5Q9HDB9 667 aa13.89□□□□□ -0.19
HERC6-202ENST00000273960 DAAM1Q9Y4D1 1078 aa13.89□□□□□ -0.19
HERC6-202ENST00000273960 AFDNP55196 1824 aaKnown RBP13.89□□□□□ -0.19
HERC6-202ENST00000273960 C6orf229H3BNL8 230 aa13.89□□□□□ -0.19
HERC6-202ENST00000273960 SCNN1BP51168 640 aa13.89□□□□□ -0.19
HERC6-202ENST00000273960 DR1Q01658 176 aa13.89□□□□□ -0.19
HERC6-202ENST00000273960 SUPT20HQ8NEM7 779 aa13.89□□□□□ -0.19
HERC6-202ENST00000273960 CCHCR1Q8TD31 782 aa13.89□□□□□ -0.19
HERC6-202ENST00000273960 CALML4Q96GE6 196 aa13.89□□□□□ -0.19
HERC6-202ENST00000273960 PLA2G12BQ9BX93 195 aa13.89□□□□□ -0.19
HERC6-202ENST00000273960 NPHP3-ACAD11A0A0J9YXS1 232 aa13.88□□□□□ -0.19
HERC6-202ENST00000273960 KCNJ1P48048 391 aa13.88□□□□□ -0.19
HERC6-202ENST00000273960 TRIP13Q15645 432 aaPredicted RBP13.88□□□□□ -0.19
HERC6-202ENST00000273960 ZNF571Q7Z3V5 609 aaPredicted RBP13.88□□□□□ -0.19
HERC6-202ENST00000273960 ZSCAN29Q8IWY8 852 aaPredicted RBP13.88□□□□□ -0.19
HERC6-202ENST00000273960 EPAS1Q99814 870 aa13.88□□□□□ -0.19
HERC6-202ENST00000273960 TSG101Q99816 390 aa13.88□□□□□ -0.19
HERC6-202ENST00000273960 ADAM7Q9H2U9 754 aa13.88□□□□□ -0.19
HERC6-202ENST00000273960 TMEM165Q9HC07 324 aa13.88□□□□□ -0.19
HERC6-202ENST00000273960 FBXO3Q9UK99 471 aa13.88□□□□□ -0.19
HERC6-202ENST00000273960 RASGRF2O14827 1237 aa13.88□□□□□ -0.19
HERC6-202ENST00000273960 NOL4O94818 638 aa13.88□□□□□ -0.19
HERC6-202ENST00000273960 NTSR2O95665 410 aa13.88□□□□□ -0.19
HERC6-202ENST00000273960 FGFR1OPO95684 399 aaKnown RBP13.88□□□□□ -0.19
HERC6-202ENST00000273960 SH3RF3Q8TEJ3 882 aaPredicted RBP13.88□□□□□ -0.19
HERC6-202ENST00000273960 C18orf8Q96DM3 657 aa13.88□□□□□ -0.19
HERC6-202ENST00000273960 IFT74Q96LB3 600 aa13.88□□□□□ -0.19
HERC6-202ENST00000273960 TMEM120BA0PK00 339 aa13.88□□□□□ -0.19
HERC6-202ENST00000273960 PRDX5P30044 214 aa13.88□□□□□ -0.19
HERC6-202ENST00000273960 USP11P51784 963 aa13.88□□□□□ -0.19
HERC6-202ENST00000273960 PIGWQ7Z7B1 504 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms