RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 DUX4L5P0CJ88 424 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 DUX4L6P0CJ89 424 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 DUX4L7P0CJ90 424 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 TSTA3Q13630 321 aaPredicted RBP8.54□□□□□ -1.04
LIMD1-201ENST00000273317 LINC00301Q8NCQ3 95 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 MCUQ8NE86 351 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 UHMK1Q8TAS1 419 aaKnown RBP8.54□□□□□ -1.04
LIMD1-201ENST00000273317 DCAF4Q8WV16 495 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 NCLNQ969V3 563 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 DUX4Q9UBX2 424 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 BCAMP50895 628 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 NOP14P78316 857 aaKnown RBP8.54□□□□□ -1.04
LIMD1-201ENST00000273317 C1orf146Q5VVC0 180 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 NBPF3Q9H094 633 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 AKT3Q9Y243 479 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 MYO9BQ13459 2157 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 SYCE1LA8MT33 242 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 POLE2P56282 527 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 TMPRSS15P98073 1019 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 MORF4L2Q15014 288 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 CCNYQ8ND76 341 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 MRGBPQ9NV56 204 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 ACSL3O95573 720 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 TRIM60Q495X7 471 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 SYDE2Q5VT97 1194 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 FBXO38Q6PIJ6 1188 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 TRIML2Q8N7C3 387 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 ASPSCR1Q9BZE9 553 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 SLC4A7Q9Y6M7 1214 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 LRRN2O75325 713 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 RAP1GDS1P52306 607 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 MAPRE2Q15555 327 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 CALN1Q9BXU9 219 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 PITPNM3Q9BZ71 974 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 NDST4Q9H3R1 872 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 SLC24A3Q9HC58 644 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 PPARGC1AQ9UBK2 798 aaKnown RBP8.54□□□□□ -1.04
LIMD1-201ENST00000273317 NFU1Q9UMS0 254 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 BBS9Q3SYG4 887 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 ANO5Q75V66 913 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 ICA1LQ8NDH6 482 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 NOVA2Q9UNW9 492 aaKnown RBP8.54□□□□□ -1.04
LIMD1-201ENST00000273317 MYH11P35749 1972 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 FTCDO95954 541 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 RPSAP08865 295 aaKnown RBP8.54□□□□□ -1.04
LIMD1-201ENST00000273317 SERPINB4P48594 390 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 ARHGEF6Q15052 776 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 PPCSQ9HAB8 311 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 ARHGAP26Q9UNA1 814 aa8.54□□□□□ -1.04
LIMD1-201ENST00000273317 SPDYE2BA6NHP3 402 aa8.53□□□□□ -1.04
LIMD1-201ENST00000273317 ABL1P00519 1130 aa8.53□□□□□ -1.04
LIMD1-201ENST00000273317 PLA2G4BP0C869 781 aa8.53□□□□□ -1.04
LIMD1-201ENST00000273317 SPDYE6P0CI01 402 aa8.53□□□□□ -1.04
LIMD1-201ENST00000273317 TFAMQ00059 246 aaKnown RBP8.53□□□□□ -1.04
LIMD1-201ENST00000273317 KIF19Q2TAC6 998 aa8.53□□□□□ -1.04
LIMD1-201ENST00000273317 PPP4R4Q6NUP7 873 aa8.53□□□□□ -1.04
LIMD1-201ENST00000273317 FRA10AC1Q70Z53 315 aa8.53□□□□□ -1.04
LIMD1-201ENST00000273317 CAPN11Q9UMQ6 739 aa8.53□□□□□ -1.04
LIMD1-201ENST00000273317 CHRNDQ07001 517 aa8.53□□□□□ -1.04
LIMD1-201ENST00000273317 WDR75Q8IWA0 830 aaKnown RBP8.53□□□□□ -1.04
LIMD1-201ENST00000273317 GIMAP8Q8ND71 665 aaPredicted RBP8.53□□□□□ -1.04
LIMD1-201ENST00000273317 SDR42E1Q8WUS8 393 aa8.53□□□□□ -1.04
LIMD1-201ENST00000273317 GOLGA8SH3BPF8 625 aa8.53□□□□□ -1.04
LIMD1-201ENST00000273317 IFNAR1P17181 557 aa8.53□□□□□ -1.04
LIMD1-201ENST00000273317 KCNA6P17658 529 aa8.53□□□□□ -1.04
LIMD1-201ENST00000273317 RINLQ6ZS11 566 aa8.53□□□□□ -1.04
LIMD1-201ENST00000273317 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.53□□□□□ -1.04
LIMD1-201ENST00000273317 TRPV6Q9H1D0 765 aa8.53□□□□□ -1.04
LIMD1-201ENST00000273317 DDX56Q9NY93 547 aaKnown RBP8.53□□□□□ -1.04
LIMD1-201ENST00000273317 NRBP1Q9UHY1 535 aa8.53□□□□□ -1.04
LIMD1-201ENST00000273317 SLCO1A2P46721 670 aa8.53□□□□□ -1.04
LIMD1-201ENST00000273317 PPP2R2AP63151 447 aa8.53□□□□□ -1.04
LIMD1-201ENST00000273317 TBCCQ15814 346 aa8.53□□□□□ -1.04
LIMD1-201ENST00000273317 CCDC92Q53HC0 331 aaPredicted RBP8.53□□□□□ -1.04
LIMD1-201ENST00000273317 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.53□□□□□ -1.04
LIMD1-201ENST00000273317 GCNAQ96QF7 691 aa8.53□□□□□ -1.04
LIMD1-201ENST00000273317 KIAA1586Q9HCI6 787 aa8.53□□□□□ -1.04
LIMD1-201ENST00000273317 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.53□□□□□ -1.04
LIMD1-201ENST00000273317 SENP1Q9P0U3 644 aa8.53□□□□□ -1.04
LIMD1-201ENST00000273317 STX18Q9P2W9 335 aaKnown RBP8.53□□□□□ -1.04
LIMD1-201ENST00000273317 SNX5Q9Y5X3 404 aa8.53□□□□□ -1.04
LIMD1-201ENST00000273317 MAP3K4Q9Y6R4 1608 aa8.53□□□□□ -1.04
LIMD1-201ENST00000273317 DDIT3P35638 169 aa8.53□□□□□ -1.04
LIMD1-201ENST00000273317 HP1BP3Q5SSJ5 553 aaPredicted RBP8.53□□□□□ -1.04
LIMD1-201ENST00000273317 GADL1Q6ZQY3 521 aa8.53□□□□□ -1.04
LIMD1-201ENST00000273317 CNKSR1Q969H4 720 aa8.53□□□□□ -1.04
LIMD1-201ENST00000273317 FAM167AQ96KS9 214 aa8.53□□□□□ -1.04
LIMD1-201ENST00000273317 GPBP1L1Q9HC44 474 aaPredicted RBP8.53□□□□□ -1.04
LIMD1-201ENST00000273317 INTUQ9ULD6 942 aa8.53□□□□□ -1.04
LIMD1-201ENST00000273317 THRAP3Q9Y2W1 955 aaKnown RBP8.53□□□□□ -1.04
LIMD1-201ENST00000273317 A2ML1A8K2U0 1454 aa8.53□□□□□ -1.04
LIMD1-201ENST00000273317 POTEB3A0JP26 581 aa8.53□□□□□ -1.04
LIMD1-201ENST00000273317 ASAP2O43150 1006 aa8.53□□□□□ -1.04
LIMD1-201ENST00000273317 CHRNA3P32297 505 aa8.53□□□□□ -1.04
LIMD1-201ENST00000273317 LRRC8BQ6P9F7 803 aa8.53□□□□□ -1.04
LIMD1-201ENST00000273317 POTEBQ6S5H4 581 aa8.53□□□□□ -1.04
LIMD1-201ENST00000273317 SYDE1Q6ZW31 735 aaPredicted RBP8.53□□□□□ -1.04
LIMD1-201ENST00000273317 RNF169Q8NCN4 708 aa8.53□□□□□ -1.04
LIMD1-201ENST00000273317 SPDYE1Q8NFV5 336 aaPredicted RBP8.53□□□□□ -1.04
LIMD1-201ENST00000273317 GRAMD1AQ96CP6 724 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms