RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 KCNH7Q9NS40 1196 aa10.26□□□□□ -0.77
TPM3-201ENST00000271850 ERAP1Q9NZ08 941 aa10.26□□□□□ -0.77
TPM3-201ENST00000271850 MRPL42Q9Y6G3 142 aaKnown RBP10.26□□□□□ -0.77
TPM3-201ENST00000271850 DMDP11532 3685 aa10.26□□□□□ -0.77
TPM3-201ENST00000271850 IGKV6D-21A0A0A0MT36 114 aa10.25□□□□□ -0.77
TPM3-201ENST00000271850 ZBTB42B2RXF5 422 aa10.25□□□□□ -0.77
TPM3-201ENST00000271850 STXBP3O00186 592 aa10.25□□□□□ -0.77
TPM3-201ENST00000271850 LINC01565O15544 149 aa10.25□□□□□ -0.77
TPM3-201ENST00000271850 EDIL3O43854 480 aa10.25□□□□□ -0.77
TPM3-201ENST00000271850 MGEA5O60502 916 aa10.25□□□□□ -0.77
TPM3-201ENST00000271850 CSPG5O95196 566 aa10.25□□□□□ -0.77
TPM3-201ENST00000271850 ATG7O95352 703 aa10.25□□□□□ -0.77
TPM3-201ENST00000271850 ATP4AP20648 1035 aa10.25□□□□□ -0.77
TPM3-201ENST00000271850 CTNNB1P35222 781 aa10.25□□□□□ -0.77
TPM3-201ENST00000271850 IRS1P35568 1242 aa10.25□□□□□ -0.77
TPM3-201ENST00000271850 BMPR1AP36894 532 aa10.25□□□□□ -0.77
TPM3-201ENST00000271850 ACTR2P61160 394 aa10.25□□□□□ -0.77
TPM3-201ENST00000271850 MRPS6P82932 125 aaKnown RBP10.25□□□□□ -0.77
TPM3-201ENST00000271850 ZP2Q05996 745 aa10.25□□□□□ -0.77
TPM3-201ENST00000271850 TSHZ1Q6ZSZ6 1077 aa10.25□□□□□ -0.77
TPM3-201ENST00000271850 ADGRD2Q7Z7M1 963 aa10.25□□□□□ -0.77
TPM3-201ENST00000271850 FIBCD1Q8N539 461 aa10.25□□□□□ -0.77
TPM3-201ENST00000271850 GIMAP8Q8ND71 665 aaPredicted RBP10.25□□□□□ -0.77
TPM3-201ENST00000271850 TMEM40Q8WWA1 233 aa10.25□□□□□ -0.77
TPM3-201ENST00000271850 FAM49AQ9H0Q0 323 aaPredicted RBP10.25□□□□□ -0.77
TPM3-201ENST00000271850 SMARCAD1Q9H4L7 1026 aa10.25□□□□□ -0.77
TPM3-201ENST00000271850 CDHR5Q9HBB8 845 aa10.25□□□□□ -0.77
TPM3-201ENST00000271850 AGO4Q9HCK5 861 aaKnown RBP10.25□□□□□ -0.77
TPM3-201ENST00000271850 SLC9A2Q9UBY0 812 aa10.25□□□□□ -0.77
TPM3-201ENST00000271850 PCDHGC5Q9Y5F6 944 aa10.25□□□□□ -0.77
TPM3-201ENST00000271850 PCDHGA10Q9Y5H3 936 aa10.25□□□□□ -0.77
TPM3-201ENST00000271850 SLC12A7Q9Y666 1083 aa10.25□□□□□ -0.77
TPM3-201ENST00000271850 IGLV3-22A0A075B6J6 115 aa10.24□□□□□ -0.77
TPM3-201ENST00000271850 FAM86B1E9PN63 330 aa10.24□□□□□ -0.77
TPM3-201ENST00000271850 DHX15O43143 795 aaKnown RBP10.24□□□□□ -0.77
TPM3-201ENST00000271850 FAM86B2P0C5J1 330 aa10.24□□□□□ -0.77
TPM3-201ENST00000271850 CALM1P0DP23 149 aa10.24□□□□□ -0.77
TPM3-201ENST00000271850 CALM2P0DP24 149 aa10.24□□□□□ -0.77
TPM3-201ENST00000271850 CALM3P0DP25 149 aa10.24□□□□□ -0.77
TPM3-201ENST00000271850 CPA1P15085 419 aa10.24□□□□□ -0.77
TPM3-201ENST00000271850 PTPROQ16827 1216 aa10.24□□□□□ -0.77
TPM3-201ENST00000271850 CCDC60Q8IWA6 550 aaPredicted RBP10.24□□□□□ -0.77
TPM3-201ENST00000271850 TMTC2Q8N394 836 aa10.24□□□□□ -0.77
TPM3-201ENST00000271850 GLG1Q92896 1179 aa10.24□□□□□ -0.77
TPM3-201ENST00000271850 CDHR1Q96JP9 859 aa10.24□□□□□ -0.77
TPM3-201ENST00000271850 UIMC1Q96RL1 719 aa10.24□□□□□ -0.77
TPM3-201ENST00000271850 ANO3Q9BYT9 981 aa10.24□□□□□ -0.77
TPM3-201ENST00000271850 ALG13Q9NP73 1137 aaKnown RBP10.24□□□□□ -0.77
TPM3-201ENST00000271850 RIC8AQ9NPQ8 531 aa10.24□□□□□ -0.77
TPM3-201ENST00000271850 ANO2Q9NQ90 1003 aa10.24□□□□□ -0.77
TPM3-201ENST00000271850 KIAA1468Q9P260 1216 aa10.24□□□□□ -0.77
TPM3-201ENST00000271850 PCDHA2Q9Y5H9 948 aa10.24□□□□□ -0.77
TPM3-201ENST00000271850 MYO15AQ9UKN7 3530 aa10.24□□□□□ -0.77
TPM3-201ENST00000271850 NFASCO94856 1347 aa10.24□□□□□ -0.77
TPM3-201ENST00000271850 IGSF9BQ9UPX0 1349 aa10.24□□□□□ -0.77
TPM3-201ENST00000271850 PIEZO1Q92508 2521 aa10.24□□□□□ -0.77
TPM3-201ENST00000271850 PLXNA4Q9HCM2 1894 aa10.23□□□□□ -0.77
TPM3-201ENST00000271850 ZNF318Q5VUA4 2279 aa10.23□□□□□ -0.77
TPM3-201ENST00000271850 SPDYE3A6NKU9 549 aa10.23□□□□□ -0.77
TPM3-201ENST00000271850 MEIS1O00470 390 aa10.23□□□□□ -0.77
TPM3-201ENST00000271850 MAFGO15525 162 aa10.23□□□□□ -0.77
TPM3-201ENST00000271850 MMP1P03956 469 aa10.23□□□□□ -0.77
TPM3-201ENST00000271850 ITGB1P05556 798 aa10.23□□□□□ -0.77
TPM3-201ENST00000271850 RB1P06400 928 aa10.23□□□□□ -0.77
TPM3-201ENST00000271850 SREBF1P36956 1147 aa10.23□□□□□ -0.77
TPM3-201ENST00000271850 CLUL1Q15846 466 aa10.23□□□□□ -0.77
TPM3-201ENST00000271850 TMEM266Q2M3C6 531 aa10.23□□□□□ -0.77
TPM3-201ENST00000271850 CEP55Q53EZ4 464 aa10.23□□□□□ -0.77
TPM3-201ENST00000271850 MTHFD1LQ6UB35 978 aa10.23□□□□□ -0.77
TPM3-201ENST00000271850 ABHD15Q6UXT9 468 aa10.23□□□□□ -0.77
TPM3-201ENST00000271850 PLPPR4Q7Z2D5 763 aa10.23□□□□□ -0.77
TPM3-201ENST00000271850 FAM122AQ96E09 287 aa10.23□□□□□ -0.77
TPM3-201ENST00000271850 CLDND1Q9NY35 253 aa10.23□□□□□ -0.77
TPM3-201ENST00000271850 PADI3Q9ULW8 664 aa10.23□□□□□ -0.77
TPM3-201ENST00000271850 PLAGL2Q9UPG8 496 aa10.23□□□□□ -0.77
TPM3-201ENST00000271850 TRPV2Q9Y5S1 764 aa10.23□□□□□ -0.77
TPM3-201ENST00000271850 TECTAO75443 2155 aa10.23□□□□□ -0.77
TPM3-201ENST00000271850 KDM3AQ9Y4C1 1321 aa10.23□□□□□ -0.77
TPM3-201ENST00000271850 USP34Q70CQ2 3546 aa10.23□□□□□ -0.77
TPM3-201ENST00000271850 FNDC1Q4ZHG4 1894 aaPredicted RBP10.22□□□□□ -0.77
TPM3-201ENST00000271850 MBTPS2O43462 519 aa10.22□□□□□ -0.77
TPM3-201ENST00000271850 GLP2RO95838 553 aa10.22□□□□□ -0.77
TPM3-201ENST00000271850 STAT5BP51692 787 aa10.22□□□□□ -0.77
TPM3-201ENST00000271850 NAPAP54920 295 aa10.22□□□□□ -0.77
TPM3-201ENST00000271850 RBM10P98175 930 aaKnown RBP10.22□□□□□ -0.77
TPM3-201ENST00000271850 BTG3Q14201 252 aaPredicted RBP10.22□□□□□ -0.77
TPM3-201ENST00000271850 SMAD2Q15796 467 aaKnown RBP10.22□□□□□ -0.77
TPM3-201ENST00000271850 PKN1Q16512 942 aa10.22□□□□□ -0.77
TPM3-201ENST00000271850 TSGA10IPQ3SY00 556 aa10.22□□□□□ -0.77
TPM3-201ENST00000271850 PPP1R18Q6NYC8 613 aa10.22□□□□□ -0.77
TPM3-201ENST00000271850 KIAA0319LQ8IZA0 1049 aa10.22□□□□□ -0.77
TPM3-201ENST00000271850 SPPL3Q8TCT6 385 aa10.22□□□□□ -0.77
TPM3-201ENST00000271850 MSLNLQ96KJ4 702 aa10.22□□□□□ -0.77
TPM3-201ENST00000271850 NEK1Q96PY6 1258 aa10.22□□□□□ -0.77
TPM3-201ENST00000271850 C11orf84Q9BUA3 381 aaPredicted RBP10.22□□□□□ -0.77
TPM3-201ENST00000271850 CELF4Q9BZC1 486 aaKnown RBP10.22□□□□□ -0.77
TPM3-201ENST00000271850 LMAN2LQ9H0V9 348 aa10.22□□□□□ -0.77
TPM3-201ENST00000271850 ERVK-5Q9HDB9 667 aa10.22□□□□□ -0.77
TPM3-201ENST00000271850 BARHL2Q9NY43 387 aa10.22□□□□□ -0.77
TPM3-201ENST00000271850 CLEC1BQ9P126 229 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms