RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 PIGOQ8TEQ8 1089 aa14.28□□□□□ -0.12
SS18-202ENST00000269138 BADQ92934 168 aa14.28□□□□□ -0.12
SS18-202ENST00000269138 RAB34Q9BZG1 259 aa14.28□□□□□ -0.12
SS18-202ENST00000269138 FAM49AQ9H0Q0 323 aaPredicted RBP14.28□□□□□ -0.12
SS18-202ENST00000269138 CSRNP2Q9H175 543 aa14.28□□□□□ -0.12
SS18-202ENST00000269138 WNT8AQ9H1J5 351 aa14.28□□□□□ -0.12
SS18-202ENST00000269138 SRPRBQ9Y5M8 271 aaKnown RBP14.28□□□□□ -0.12
SS18-202ENST00000269138 TRIP12Q14669 1992 aaPredicted RBP14.28□□□□□ -0.12
SS18-202ENST00000269138 SPTLC2O15270 562 aa14.27□□□□□ -0.12
SS18-202ENST00000269138 THPOP40225 353 aa14.27□□□□□ -0.12
SS18-202ENST00000269138 MDM2Q00987 491 aaPredicted RBP14.27□□□□□ -0.12
SS18-202ENST00000269138 KRT79Q5XKE5 535 aa14.27□□□□□ -0.12
SS18-202ENST00000269138 USP49Q70CQ1 688 aa14.27□□□□□ -0.12
SS18-202ENST00000269138 DNAJB3Q8WWF6 145 aa14.27□□□□□ -0.12
SS18-202ENST00000269138 PCDHA2Q9Y5H9 948 aa14.27□□□□□ -0.12
SS18-202ENST00000269138 MYH9P35579 1960 aaKnown RBP14.27□□□□□ -0.12
SS18-202ENST00000269138 PDE4DIPQ5VU43 2346 aa14.27□□□□□ -0.13
SS18-202ENST00000269138 WDR81Q562E7 1941 aa14.26□□□□□ -0.13
SS18-202ENST00000269138 YEATS4O95619 227 aa14.26□□□□□ -0.13
SS18-202ENST00000269138 CKBP12277 381 aa14.26□□□□□ -0.13
SS18-202ENST00000269138 LONP1P36776 959 aaKnown RBP14.26□□□□□ -0.13
SS18-202ENST00000269138 MAGEA10P43363 369 aaPredicted RBP14.26□□□□□ -0.13
SS18-202ENST00000269138 BFSP2Q13515 415 aa14.26□□□□□ -0.13
SS18-202ENST00000269138 ZRSR1Q15695 479 aaKnown RBP14.26□□□□□ -0.13
SS18-202ENST00000269138 XKR9Q5GH70 373 aa14.26□□□□□ -0.13
SS18-202ENST00000269138 ZNF618Q5T7W0 954 aa14.26□□□□□ -0.13
SS18-202ENST00000269138 HAUS3Q68CZ6 603 aa14.26□□□□□ -0.13
SS18-202ENST00000269138 TRAF7Q6Q0C0 670 aa14.26□□□□□ -0.13
SS18-202ENST00000269138 SCLYQ96I15 445 aa14.26□□□□□ -0.13
SS18-202ENST00000269138 CEP170P1Q96L14 293 aa14.26□□□□□ -0.13
SS18-202ENST00000269138 PNMA5Q96PV4 448 aa14.26□□□□□ -0.13
SS18-202ENST00000269138 PLIN2Q99541 437 aa14.26□□□□□ -0.13
SS18-202ENST00000269138 CYP26B1Q9NR63 512 aa14.26□□□□□ -0.13
SS18-202ENST00000269138 KIAA1024Q9UPX6 916 aa14.26□□□□□ -0.13
SS18-202ENST00000269138 MORC2Q9Y6X9 1032 aaPredicted RBP14.26□□□□□ -0.13
SS18-202ENST00000269138 CTSHP09668 335 aa14.25□□□□□ -0.13
SS18-202ENST00000269138 NCLP19338 710 aaKnown RBP14.25□□□□□ -0.13
SS18-202ENST00000269138 CLCN3P51790 818 aa14.25□□□□□ -0.13
SS18-202ENST00000269138 TBC1D8BQ0IIM8 1120 aa14.25□□□□□ -0.13
SS18-202ENST00000269138 ATL3Q6DD88 541 aa14.25□□□□□ -0.13
SS18-202ENST00000269138 EFCAB12Q6NXP0 572 aa14.25□□□□□ -0.13
SS18-202ENST00000269138 TAF2Q6P1X5 1199 aa14.25□□□□□ -0.13
SS18-202ENST00000269138 OTUD6AQ7L8S5 288 aa14.25□□□□□ -0.13
SS18-202ENST00000269138 KCNK18Q7Z418 384 aa14.25□□□□□ -0.13
SS18-202ENST00000269138 CABP7Q86V35 215 aa14.25□□□□□ -0.13
SS18-202ENST00000269138 KIAA0319LQ8IZA0 1049 aa14.25□□□□□ -0.13
SS18-202ENST00000269138 LRRC71Q8N4P6 559 aa14.25□□□□□ -0.13
SS18-202ENST00000269138 METTL13Q8N6R0 699 aa14.25□□□□□ -0.13
SS18-202ENST00000269138 KRI1Q8N9T8 703 aaKnown RBP14.25□□□□□ -0.13
SS18-202ENST00000269138 RETREG2Q8NC44 543 aa14.25□□□□□ -0.13
SS18-202ENST00000269138 CAGE1Q8TC20 777 aa14.25□□□□□ -0.13
SS18-202ENST00000269138 EPSTI1Q96J88 318 aa14.25□□□□□ -0.13
SS18-202ENST00000269138 AK8Q96MA6 479 aa14.25□□□□□ -0.13
SS18-202ENST00000269138 NACC1Q96RE7 527 aa14.25□□□□□ -0.13
SS18-202ENST00000269138 OSBPL7Q9BZF2 842 aa14.25□□□□□ -0.13
SS18-202ENST00000269138 SUGCTQ9HAC7 445 aa14.25□□□□□ -0.13
SS18-202ENST00000269138 BMP2KQ9NSY1 1161 aaPredicted RBP14.25□□□□□ -0.13
SS18-202ENST00000269138 ANKEF1Q9NU02 776 aa14.25□□□□□ -0.13
SS18-202ENST00000269138 DDX19AQ9NUU7 478 aaKnown RBP14.25□□□□□ -0.13
SS18-202ENST00000269138 RCOR1Q9UKL0 485 aa14.25□□□□□ -0.13
SS18-202ENST00000269138 SMIM35A0A1B0GVV1 85 aa14.25□□□□□ -0.13
SS18-202ENST00000269138 PITPNM1O00562 1244 aa14.25□□□□□ -0.13
SS18-202ENST00000269138 MAGEB2O15479 319 aa14.25□□□□□ -0.13
SS18-202ENST00000269138 IQCF3P0C7M6 154 aa14.25□□□□□ -0.13
SS18-202ENST00000269138 CSF2RAP15509 400 aa14.25□□□□□ -0.13
SS18-202ENST00000269138 SELPP16109 830 aa14.25□□□□□ -0.13
SS18-202ENST00000269138 RARRES1P49788 294 aa14.25□□□□□ -0.13
SS18-202ENST00000269138 EPHB4P54760 987 aa14.25□□□□□ -0.13
SS18-202ENST00000269138 RBL2Q08999 1139 aa14.25□□□□□ -0.13
SS18-202ENST00000269138 TMEM62Q0P6H9 643 aa14.25□□□□□ -0.13
SS18-202ENST00000269138 GRB10Q13322 594 aa14.25□□□□□ -0.13
SS18-202ENST00000269138 MKRN4PQ13434 485 aaPredicted RBP14.25□□□□□ -0.13
SS18-202ENST00000269138 DRP2Q13474 957 aa14.25□□□□□ -0.13
SS18-202ENST00000269138 GPNMBQ14956 572 aa14.25□□□□□ -0.13
SS18-202ENST00000269138 MFSD5Q6N075 450 aa14.25□□□□□ -0.13
SS18-202ENST00000269138 CCDC155Q8N6L0 562 aa14.25□□□□□ -0.13
SS18-202ENST00000269138 LINC01465Q8N7H1 131 aa14.25□□□□□ -0.13
SS18-202ENST00000269138 VWCEQ96DN2 955 aa14.25□□□□□ -0.13
SS18-202ENST00000269138 IPO9Q96P70 1041 aaKnown RBP14.25□□□□□ -0.13
SS18-202ENST00000269138 LBHD1Q9BQE6 289 aaPredicted RBP14.25□□□□□ -0.13
SS18-202ENST00000269138 CFAP45Q9UL16 551 aa14.25□□□□□ -0.13
SS18-202ENST00000269138 CIZ1Q9ULV3 898 aaPredicted RBP14.25□□□□□ -0.13
SS18-202ENST00000269138 STK24Q9Y6E0 443 aa14.25□□□□□ -0.13
SS18-202ENST00000269138 CEP290O15078 2479 aa14.24□□□□□ -0.13
SS18-202ENST00000269138 IGKV6-21A0A0C4DH24 114 aa14.24□□□□□ -0.13
SS18-202ENST00000269138 E9PMD0 336 aa14.24□□□□□ -0.13
SS18-202ENST00000269138 PPP6R2O75170 966 aa14.24□□□□□ -0.13
SS18-202ENST00000269138 MAFO75444 373 aaPredicted RBP14.24□□□□□ -0.13
SS18-202ENST00000269138 CHRNA1P02708 482 aa14.24□□□□□ -0.13
SS18-202ENST00000269138 XRCC6P12956 609 aaKnown RBP eCLIP14.24□□□□□ -0.13
SS18-202ENST00000269138 MUTP22033 750 aa14.24□□□□□ -0.13
SS18-202ENST00000269138 UBA7P41226 1012 aa14.24□□□□□ -0.13
SS18-202ENST00000269138 KRT85P78386 507 aa14.24□□□□□ -0.13
SS18-202ENST00000269138 MBTPS1Q14703 1052 aa14.24□□□□□ -0.13
SS18-202ENST00000269138 HYIQ5T013 277 aa14.24□□□□□ -0.13
SS18-202ENST00000269138 LRRC8DQ7L1W4 858 aa14.24□□□□□ -0.13
SS18-202ENST00000269138 RPAINQ86UA6 219 aa14.24□□□□□ -0.13
SS18-202ENST00000269138 LRRC15Q8TF66 581 aa14.24□□□□□ -0.13
SS18-202ENST00000269138 LEO1Q8WVC0 666 aaPredicted RBP14.24□□□□□ -0.13
SS18-202ENST00000269138 SYMPKQ92797 1274 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms