RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 POTEBQ6S5H4 581 aa12.48□□□□□ -0.41
VPS33A-201ENST00000267199 NEDD1Q8NHV4 660 aa12.48□□□□□ -0.41
VPS33A-201ENST00000267199 PCIF1Q9H4Z3 704 aa12.48□□□□□ -0.41
VPS33A-201ENST00000267199 MAP7Q14244 749 aa12.48□□□□□ -0.41
VPS33A-201ENST00000267199 RASA3Q14644 834 aa12.48□□□□□ -0.41
VPS33A-201ENST00000267199 C6orf118Q5T5N4 469 aa12.48□□□□□ -0.41
VPS33A-201ENST00000267199 FOXP4Q8IVH2 680 aaPredicted RBP12.48□□□□□ -0.41
VPS33A-201ENST00000267199 ANKRD35Q8N283 1001 aa12.48□□□□□ -0.41
VPS33A-201ENST00000267199 GSDMBQ8TAX9 411 aa12.48□□□□□ -0.41
VPS33A-201ENST00000267199 PITPNM3Q9BZ71 974 aa12.48□□□□□ -0.41
VPS33A-201ENST00000267199 SCOCQ9UIL1 159 aa12.48□□□□□ -0.41
VPS33A-201ENST00000267199 PPP1R3GB7ZBB8 358 aa12.47□□□□□ -0.41
VPS33A-201ENST00000267199 USP17L10C9JJH3 530 aa12.47□□□□□ -0.41
VPS33A-201ENST00000267199 CD44P16070 742 aaKnown RBP12.47□□□□□ -0.41
VPS33A-201ENST00000267199 GAP43P17677 238 aa12.47□□□□□ -0.41
VPS33A-201ENST00000267199 CA4P22748 312 aa12.47□□□□□ -0.41
VPS33A-201ENST00000267199 TRPC3Q13507 836 aa12.47□□□□□ -0.41
VPS33A-201ENST00000267199 NKX1-1Q15270 411 aaPredicted RBP12.47□□□□□ -0.41
VPS33A-201ENST00000267199 CAPRIN2Q6IMN6 1127 aaKnown RBP12.47□□□□□ -0.41
VPS33A-201ENST00000267199 MSANTD4Q8NCY6 345 aa12.47□□□□□ -0.41
VPS33A-201ENST00000267199 GRK7Q8WTQ7 553 aa12.47□□□□□ -0.41
VPS33A-201ENST00000267199 MPHOSPH6Q99547 160 aaKnown RBP12.47□□□□□ -0.41
VPS33A-201ENST00000267199 CEP72Q9P209 647 aa12.47□□□□□ -0.41
VPS33A-201ENST00000267199 CLRN2A0PK11 232 aa12.47□□□□□ -0.41
VPS33A-201ENST00000267199 PFDN1O60925 122 aa12.47□□□□□ -0.41
VPS33A-201ENST00000267199 KCNH2Q12809 1159 aa12.47□□□□□ -0.41
VPS33A-201ENST00000267199 SRRM1Q8IYB3 904 aaKnown RBP12.47□□□□□ -0.41
VPS33A-201ENST00000267199 PROM2Q8N271 834 aa12.47□□□□□ -0.41
VPS33A-201ENST00000267199 ZNF577Q9BSK1 485 aa12.47□□□□□ -0.41
VPS33A-201ENST00000267199 ETNK1Q9HBU6 452 aa12.47□□□□□ -0.41
VPS33A-201ENST00000267199 TXLNGQ9NUQ3 528 aa12.47□□□□□ -0.41
VPS33A-201ENST00000267199 DMGDHQ9UI17 866 aaKnown RBP12.47□□□□□ -0.41
VPS33A-201ENST00000267199 ANAPC5Q9UJX4 755 aa12.47□□□□□ -0.41
VPS33A-201ENST00000267199 ITIH6Q6UXX5 1313 aa12.47□□□□□ -0.41
VPS33A-201ENST00000267199 ZBED4O75132 1171 aa12.47□□□□□ -0.41
VPS33A-201ENST00000267199 ZRANB2O95218 330 aaKnown RBP eCLIP12.47□□□□□ -0.41
VPS33A-201ENST00000267199 CTTNQ14247 550 aaKnown RBP12.47□□□□□ -0.41
VPS33A-201ENST00000267199 EZH2Q15910 746 aaKnown RBP12.47□□□□□ -0.41
VPS33A-201ENST00000267199 CYTH2Q99418 400 aa12.47□□□□□ -0.41
VPS33A-201ENST00000267199 ZBTB5O15062 677 aa12.47□□□□□ -0.41
VPS33A-201ENST00000267199 EVI5O60447 810 aa12.47□□□□□ -0.41
VPS33A-201ENST00000267199 DIAPH2O60879 1101 aa12.47□□□□□ -0.41
VPS33A-201ENST00000267199 SERPINB6P35237 376 aa12.47□□□□□ -0.41
VPS33A-201ENST00000267199 ERFP50548 548 aa12.47□□□□□ -0.41
VPS33A-201ENST00000267199 ADCY2Q08462 1091 aa12.47□□□□□ -0.41
VPS33A-201ENST00000267199 SLMAPQ14BN4 828 aa12.47□□□□□ -0.41
VPS33A-201ENST00000267199 SFR1Q86XK3 245 aa12.47□□□□□ -0.41
VPS33A-201ENST00000267199 PIGOQ8TEQ8 1089 aa12.47□□□□□ -0.41
VPS33A-201ENST00000267199 GOLPH3Q9H4A6 298 aa12.47□□□□□ -0.41
VPS33A-201ENST00000267199 PARVGQ9HBI0 331 aa12.47□□□□□ -0.41
VPS33A-201ENST00000267199 PI4KBQ9UBF8 816 aa12.47□□□□□ -0.41
VPS33A-201ENST00000267199 PSMD14O00487 310 aa12.46□□□□□ -0.41
VPS33A-201ENST00000267199 NOL3O60936 208 aaKnown RBP12.46□□□□□ -0.41
VPS33A-201ENST00000267199 SF3B3Q15393 1217 aaKnown RBP12.46□□□□□ -0.41
VPS33A-201ENST00000267199 ZC3H18Q86VM9 953 aaKnown RBP12.46□□□□□ -0.41
VPS33A-201ENST00000267199 CCPG1Q9ULG6 757 aa12.46□□□□□ -0.41
VPS33A-201ENST00000267199 RHOBTB3O94955 611 aa12.46□□□□□ -0.41
VPS33A-201ENST00000267199 NTSR2O95665 410 aa12.46□□□□□ -0.41
VPS33A-201ENST00000267199 SRGNP10124 158 aa12.46□□□□□ -0.41
VPS33A-201ENST00000267199 RSAD2Q8WXG1 361 aa12.46□□□□□ -0.41
VPS33A-201ENST00000267199 EHD4Q9H223 541 aa12.46□□□□□ -0.41
VPS33A-201ENST00000267199 NOC2LQ9Y3T9 749 aaKnown RBP12.46□□□□□ -0.41
VPS33A-201ENST00000267199 SALL1Q9NSC2 1324 aa12.46□□□□□ -0.41
VPS33A-201ENST00000267199 EXOC1LA0A1B0GW35 172 aa12.46□□□□□ -0.42
VPS33A-201ENST00000267199 SART1O43290 800 aaKnown RBP12.46□□□□□ -0.42
VPS33A-201ENST00000267199 SORBS3O60504 671 aa12.46□□□□□ -0.42
VPS33A-201ENST00000267199 SKIP12755 728 aa12.46□□□□□ -0.42
VPS33A-201ENST00000267199 TMED8Q6PL24 325 aaPredicted RBP12.46□□□□□ -0.42
VPS33A-201ENST00000267199 PPP4R3CPQ6ZMV5 832 aa12.46□□□□□ -0.42
VPS33A-201ENST00000267199 ARHGEF1Q92888 912 aaKnown RBP12.46□□□□□ -0.42
VPS33A-201ENST00000267199 NACC1Q96RE7 527 aa12.46□□□□□ -0.42
VPS33A-201ENST00000267199 SLC40A1Q9NP59 571 aa12.46□□□□□ -0.42
VPS33A-201ENST00000267199 C1orf112Q9NSG2 853 aa12.46□□□□□ -0.42
VPS33A-201ENST00000267199 GJA3Q9Y6H8 435 aa12.46□□□□□ -0.42
VPS33A-201ENST00000267199 POTEFA5A3E0 1075 aa12.45□□□□□ -0.42
VPS33A-201ENST00000267199 PLEKP08567 350 aaPredicted RBP12.45□□□□□ -0.42
VPS33A-201ENST00000267199 POTEIP0CG38 1075 aa12.45□□□□□ -0.42
VPS33A-201ENST00000267199 TMCO4Q5TGY1 634 aa12.45□□□□□ -0.42
VPS33A-201ENST00000267199 SYDE2Q5VT97 1194 aa12.45□□□□□ -0.42
VPS33A-201ENST00000267199 POTEGQ6S5H5 508 aa12.45□□□□□ -0.42
VPS33A-201ENST00000267199 POTEEQ6S8J3 1075 aa12.45□□□□□ -0.42
VPS33A-201ENST00000267199 ELOA2Q8IYF1 753 aaPredicted RBP12.45□□□□□ -0.42
VPS33A-201ENST00000267199 ARMC2Q8NEN0 867 aa12.45□□□□□ -0.42
VPS33A-201ENST00000267199 CCHCR1Q8TD31 782 aa12.45□□□□□ -0.42
VPS33A-201ENST00000267199 CYFIP2Q96F07 1278 aa12.45□□□□□ -0.42
VPS33A-201ENST00000267199 LACRTQ9GZZ8 138 aa12.45□□□□□ -0.42
VPS33A-201ENST00000267199 PICK1Q9NRD5 415 aa12.45□□□□□ -0.42
VPS33A-201ENST00000267199 BFSP1Q12934 665 aa12.45□□□□□ -0.42
VPS33A-201ENST00000267199 C10orf76Q5T2E6 689 aa12.45□□□□□ -0.42
VPS33A-201ENST00000267199 LGSNQ5TDP6 509 aa12.45□□□□□ -0.42
VPS33A-201ENST00000267199 NLGN1Q8N2Q7 840 aa12.45□□□□□ -0.42
VPS33A-201ENST00000267199 FBXL16Q8N461 479 aa12.45□□□□□ -0.42
VPS33A-201ENST00000267199 RAB20Q9NX57 234 aa12.45□□□□□ -0.42
VPS33A-201ENST00000267199 KIF1CO43896 1103 aaKnown RBP12.45□□□□□ -0.42
VPS33A-201ENST00000267199 MAN1A1P33908 653 aa12.45□□□□□ -0.42
VPS33A-201ENST00000267199 PMS2P54278 862 aa12.45□□□□□ -0.42
VPS33A-201ENST00000267199 TPD52P55327 224 aaPredicted RBP12.45□□□□□ -0.42
VPS33A-201ENST00000267199 MKRN4PQ13434 485 aaPredicted RBP12.45□□□□□ -0.42
VPS33A-201ENST00000267199 SBK1Q52WX2 424 aa12.45□□□□□ -0.42
VPS33A-201ENST00000267199 CLEC10AQ8IUN9 316 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms