RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 ZMYM2Q9UBW7 1377 aa18.55■□□□□ 0.56
CHKA-201ENST00000265689 ENC1O14682 589 aa18.55■□□□□ 0.56
CHKA-201ENST00000265689 USP2O75604 605 aaPredicted RBP18.55■□□□□ 0.56
CHKA-201ENST00000265689 VAV2P52735 878 aa18.55■□□□□ 0.56
CHKA-201ENST00000265689 ZNF131P52739 623 aa18.55■□□□□ 0.56
CHKA-201ENST00000265689 SRGAP1Q7Z6B7 1085 aa18.55■□□□□ 0.56
CHKA-201ENST00000265689 AS3MTQ9HBK9 375 aa18.55■□□□□ 0.56
CHKA-201ENST00000265689 SAMM50Q9Y512 469 aa18.55■□□□□ 0.56
CHKA-201ENST00000265689 EIF3DO15371 548 aaKnown RBP eCLIP18.54■□□□□ 0.56
CHKA-201ENST00000265689 TLR2O60603 784 aa18.54■□□□□ 0.56
CHKA-201ENST00000265689 AMPD2Q01433 879 aa18.54■□□□□ 0.56
CHKA-201ENST00000265689 COG2Q14746 738 aa18.54■□□□□ 0.56
CHKA-201ENST00000265689 HGSNATQ68CP4 663 aa18.54■□□□□ 0.56
CHKA-201ENST00000265689 MAEAQ7L5Y9 396 aa18.54■□□□□ 0.56
CHKA-201ENST00000265689 PHIPQ8WWQ0 1821 aa18.54■□□□□ 0.56
CHKA-201ENST00000265689 PXMP2Q9NR77 195 aa18.54■□□□□ 0.56
CHKA-201ENST00000265689 RNF146Q9NTX7 359 aa18.54■□□□□ 0.56
CHKA-201ENST00000265689 MAP3K20Q9NYL2 800 aaKnown RBP18.54■□□□□ 0.56
CHKA-201ENST00000265689 PCDHB13Q9Y5F0 798 aa18.54■□□□□ 0.56
CHKA-201ENST00000265689 PCDHA13Q9Y5I0 950 aa18.54■□□□□ 0.56
CHKA-201ENST00000265689 CEP350Q5VT06 3117 aa18.54■□□□□ 0.56
CHKA-201ENST00000265689 MACROD2A1Z1Q3 448 aa18.54■□□□□ 0.56
CHKA-201ENST00000265689 AKR1B10O60218 316 aa18.54■□□□□ 0.56
CHKA-201ENST00000265689 HIP1RO75146 1068 aa18.54■□□□□ 0.56
CHKA-201ENST00000265689 P4HBP07237 508 aaKnown RBP18.54■□□□□ 0.56
CHKA-201ENST00000265689 ACTN1P12814 892 aa18.54■□□□□ 0.56
CHKA-201ENST00000265689 RPL13P26373 211 aaKnown RBP18.54■□□□□ 0.56
CHKA-201ENST00000265689 CLCN6P51797 869 aa18.54■□□□□ 0.56
CHKA-201ENST00000265689 CHMP4BP1P59074 171 aa18.54■□□□□ 0.56
CHKA-201ENST00000265689 VGLL4Q14135 290 aa18.54■□□□□ 0.56
CHKA-201ENST00000265689 DCAF17Q5H9S7 520 aaPredicted RBP18.54■□□□□ 0.56
CHKA-201ENST00000265689 ODR4Q5SWX8 454 aa18.54■□□□□ 0.56
CHKA-201ENST00000265689 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.54■□□□□ 0.56
CHKA-201ENST00000265689 ZNF720Q7Z2F6 126 aa18.54■□□□□ 0.56
CHKA-201ENST00000265689 FAM178BQ8IXR5 827 aa18.54■□□□□ 0.56
CHKA-201ENST00000265689 SMAP1Q8IYB5 467 aaPredicted RBP18.54■□□□□ 0.56
CHKA-201ENST00000265689 NEK9Q8TD19 979 aa18.54■□□□□ 0.56
CHKA-201ENST00000265689 PDCD2LQ9BRP1 358 aa18.54■□□□□ 0.56
CHKA-201ENST00000265689 IFIH1Q9BYX4 1025 aaKnown RBP18.54■□□□□ 0.56
CHKA-201ENST00000265689 ZNF446Q9NWS9 450 aa18.54■□□□□ 0.56
CHKA-201ENST00000265689 HDAC6Q9UBN7 1215 aa18.54■□□□□ 0.56
CHKA-201ENST00000265689 PRDM4Q9UKN5 801 aa18.54■□□□□ 0.56
CHKA-201ENST00000265689 ODF2LQ9ULJ1 636 aa18.54■□□□□ 0.56
CHKA-201ENST00000265689 OTOFQ9HC10 1997 aa18.53■□□□□ 0.56
CHKA-201ENST00000265689 AFPP02771 609 aaKnown RBP18.53■□□□□ 0.56
CHKA-201ENST00000265689 EPHX2P34913 555 aa18.53■□□□□ 0.56
CHKA-201ENST00000265689 KIF5AQ12840 1032 aa18.53■□□□□ 0.56
CHKA-201ENST00000265689 MAPK7Q13164 816 aa18.53■□□□□ 0.56
CHKA-201ENST00000265689 TUBB2AQ13885 445 aa18.53■□□□□ 0.56
CHKA-201ENST00000265689 BAATQ14032 418 aaPredicted RBP18.53■□□□□ 0.56
CHKA-201ENST00000265689 PADI6Q6TGC4 694 aa18.53■□□□□ 0.56
CHKA-201ENST00000265689 DAW1Q8N136 415 aa18.53■□□□□ 0.56
CHKA-201ENST00000265689 GOLGA1Q92805 767 aa18.53■□□□□ 0.56
CHKA-201ENST00000265689 DCPSQ96C86 337 aaKnown RBP18.53■□□□□ 0.56
CHKA-201ENST00000265689 TUBB2BQ9BVA1 445 aa18.53■□□□□ 0.56
CHKA-201ENST00000265689 GANQ9H2C0 597 aa18.53■□□□□ 0.56
CHKA-201ENST00000265689 KCND2Q9NZV8 630 aa18.53■□□□□ 0.56
CHKA-201ENST00000265689 SEL1LQ9UBV2 794 aa18.53■□□□□ 0.56
CHKA-201ENST00000265689 MYO6Q9UM54 1294 aa18.53■□□□□ 0.56
CHKA-201ENST00000265689 COL11A1P12107 1806 aaPredicted RBP18.53■□□□□ 0.56
CHKA-201ENST00000265689 ATP9AO75110 1047 aa18.53■□□□□ 0.56
CHKA-201ENST00000265689 ATP1A1P05023 1023 aaKnown RBP18.53■□□□□ 0.56
CHKA-201ENST00000265689 EPB41P11171 864 aaKnown RBP18.53■□□□□ 0.56
CHKA-201ENST00000265689 XRCC5P13010 732 aaKnown RBP18.53■□□□□ 0.56
CHKA-201ENST00000265689 SLC9A1P19634 815 aa18.53■□□□□ 0.56
CHKA-201ENST00000265689 GUCY2CP25092 1073 aa18.53■□□□□ 0.56
CHKA-201ENST00000265689 TDRD12Q587J7 1177 aaKnown RBP18.53■□□□□ 0.56
CHKA-201ENST00000265689 SFMBT2Q5VUG0 894 aa18.53■□□□□ 0.56
CHKA-201ENST00000265689 ARHGEF16Q5VV41 709 aa18.53■□□□□ 0.56
CHKA-201ENST00000265689 TCERG1LQ5VWI1 586 aa18.53■□□□□ 0.56
CHKA-201ENST00000265689 SULF1Q8IWU6 871 aa18.53■□□□□ 0.56
CHKA-201ENST00000265689 REPS2Q8NFH8 660 aa18.53■□□□□ 0.56
CHKA-201ENST00000265689 ZNF526Q8TF50 670 aaPredicted RBP18.53■□□□□ 0.56
CHKA-201ENST00000265689 LCA5LO95447 670 aa18.52■□□□□ 0.56
CHKA-201ENST00000265689 ZSCAN20P17040 1043 aaPredicted RBP18.52■□□□□ 0.56
CHKA-201ENST00000265689 GFPT1Q06210 699 aaPredicted RBP18.52■□□□□ 0.56
CHKA-201ENST00000265689 ASTE1Q2TB18 679 aaPredicted RBP18.52■□□□□ 0.56
CHKA-201ENST00000265689 SAMD3Q8N6K7 520 aa18.52■□□□□ 0.56
CHKA-201ENST00000265689 CEP112Q8N8E3 955 aa18.52■□□□□ 0.56
CHKA-201ENST00000265689 SH2D3AQ9BRG2 576 aa18.52■□□□□ 0.56
CHKA-201ENST00000265689 ZNF408Q9H9D4 720 aa18.52■□□□□ 0.56
CHKA-201ENST00000265689 TESPA1A2RU30 521 aaPredicted RBP18.52■□□□□ 0.55
CHKA-201ENST00000265689 SLC16A3O15427 465 aaKnown RBP18.52■□□□□ 0.55
CHKA-201ENST00000265689 SNRNP48Q6IEG0 339 aaKnown RBP18.52■□□□□ 0.55
CHKA-201ENST00000265689 DPY19L2Q6NUT2 758 aa18.52■□□□□ 0.55
CHKA-201ENST00000265689 DPY19L2P1Q6NXN4 242 aa18.52■□□□□ 0.55
CHKA-201ENST00000265689 TRMT1LQ7Z2T5 733 aaKnown RBP18.52■□□□□ 0.55
CHKA-201ENST00000265689 TMEM150BA6NC51 233 aa18.51■□□□□ 0.55
CHKA-201ENST00000265689 FDX1P10109 184 aa18.51■□□□□ 0.55
CHKA-201ENST00000265689 ARID5AQ03989 594 aa18.51■□□□□ 0.55
CHKA-201ENST00000265689 MAPK8IP2Q13387 824 aaPredicted RBP18.51■□□□□ 0.55
CHKA-201ENST00000265689 RAPGEF1Q13905 1077 aa18.51■□□□□ 0.55
CHKA-201ENST00000265689 PLS1Q14651 629 aa18.51■□□□□ 0.55
CHKA-201ENST00000265689 UGCGQ16739 394 aa18.51■□□□□ 0.55
CHKA-201ENST00000265689 GPR161Q8N6U8 529 aaKnown RBP18.51■□□□□ 0.55
CHKA-201ENST00000265689 EHBP1Q8NDI1 1231 aa18.51■□□□□ 0.55
CHKA-201ENST00000265689 RABGGTAQ92696 567 aa18.51■□□□□ 0.55
CHKA-201ENST00000265689 SLC35C1Q96A29 364 aa18.51■□□□□ 0.55
CHKA-201ENST00000265689 METTL14Q9HCE5 456 aaKnown RBP18.51■□□□□ 0.55
CHKA-201ENST00000265689 TBC1D22BQ9NU19 505 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms