RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 USP17L4A6NCW7 530 aa19.32■□□□□ 0.68
COL5A3-201ENST00000264828 TMPRSS15P98073 1019 aa19.32■□□□□ 0.68
COL5A3-201ENST00000264828 USP17L1Q7RTZ2 530 aa19.32■□□□□ 0.68
COL5A3-201ENST00000264828 TSC22D3Q99576 134 aa19.32■□□□□ 0.68
COL5A3-201ENST00000264828 PDHA1P08559 390 aa19.32■□□□□ 0.68
COL5A3-201ENST00000264828 RWDD2BP57060 319 aa19.32■□□□□ 0.68
COL5A3-201ENST00000264828 POLR3CQ9BUI4 534 aaPredicted RBP19.32■□□□□ 0.68
COL5A3-201ENST00000264828 SEMA3EO15041 775 aa19.31■□□□□ 0.68
COL5A3-201ENST00000264828 KRT10P13645 584 aa19.31■□□□□ 0.68
COL5A3-201ENST00000264828 PSMA2P25787 234 aa19.31■□□□□ 0.68
COL5A3-201ENST00000264828 GGCXP38435 758 aa19.31■□□□□ 0.68
COL5A3-201ENST00000264828 NSUN2Q08J23 767 aaKnown RBP eCLIP19.31■□□□□ 0.68
COL5A3-201ENST00000264828 CUL4AQ13619 759 aa19.31■□□□□ 0.68
COL5A3-201ENST00000264828 NRBF2Q96F24 287 aa19.31■□□□□ 0.68
COL5A3-201ENST00000264828 HEMGNQ9BXL5 484 aa19.31■□□□□ 0.68
COL5A3-201ENST00000264828 IRAK4Q9NWZ3 460 aa19.31■□□□□ 0.68
COL5A3-201ENST00000264828 HACD3Q9P035 362 aa19.31■□□□□ 0.68
COL5A3-201ENST00000264828 GDAQ9Y2T3 454 aa19.31■□□□□ 0.68
COL5A3-201ENST00000264828 GCFC2P16383 781 aaKnown RBP19.31■□□□□ 0.68
COL5A3-201ENST00000264828 SYDE2Q5VT97 1194 aa19.31■□□□□ 0.68
COL5A3-201ENST00000264828 NCLNQ969V3 563 aa19.31■□□□□ 0.68
COL5A3-201ENST00000264828 PMLP29590 882 aa19.31■□□□□ 0.68
COL5A3-201ENST00000264828 NLGN1Q8N2Q7 840 aa19.31■□□□□ 0.68
COL5A3-201ENST00000264828 SLC12A6Q9UHW9 1150 aa19.31■□□□□ 0.68
COL5A3-201ENST00000264828 F5H423 210 aaPredicted RBP19.31■□□□□ 0.68
COL5A3-201ENST00000264828 BNIP3LO60238 219 aa19.31■□□□□ 0.68
COL5A3-201ENST00000264828 NPR1P16066 1061 aa19.31■□□□□ 0.68
COL5A3-201ENST00000264828 KCNQ4P56696 695 aa19.31■□□□□ 0.68
COL5A3-201ENST00000264828 KRT27Q7Z3Y8 459 aa19.31■□□□□ 0.68
COL5A3-201ENST00000264828 BEGAINQ9BUH8 593 aa19.31■□□□□ 0.68
COL5A3-201ENST00000264828 NOP53Q9NZM5 478 aaKnown RBP19.31■□□□□ 0.68
COL5A3-201ENST00000264828 CDK12Q9NYV4 1490 aaPredicted RBP19.3■□□□□ 0.68
COL5A3-201ENST00000264828 GYG2O15488 501 aa19.3■□□□□ 0.68
COL5A3-201ENST00000264828 MARK3P27448 753 aa19.3■□□□□ 0.68
COL5A3-201ENST00000264828 CASP1P29466 404 aa19.3■□□□□ 0.68
COL5A3-201ENST00000264828 RGS9BPQ6ZS82 235 aa19.3■□□□□ 0.68
COL5A3-201ENST00000264828 TRIM49BA6NDI0 452 aa19.3■□□□□ 0.68
COL5A3-201ENST00000264828 HNRNPCL2B2RXH8 293 aa19.3■□□□□ 0.68
COL5A3-201ENST00000264828 PRPF3O43395 683 aaKnown RBP19.3■□□□□ 0.68
COL5A3-201ENST00000264828 HNRNPCL1O60812 293 aaKnown RBP19.3■□□□□ 0.68
COL5A3-201ENST00000264828 SERPINB2P05120 415 aa19.3■□□□□ 0.68
COL5A3-201ENST00000264828 ALKBH5Q6P6C2 394 aaKnown RBP19.3■□□□□ 0.68
COL5A3-201ENST00000264828 TRIM15Q9C019 465 aa19.3■□□□□ 0.68
COL5A3-201ENST00000264828 UPF3AQ9H1J1 476 aaKnown RBP19.3■□□□□ 0.68
COL5A3-201ENST00000264828 SRGAP2CP0DJJ0 459 aa19.3■□□□□ 0.68
COL5A3-201ENST00000264828 ARHGDIAP52565 204 aa19.3■□□□□ 0.68
COL5A3-201ENST00000264828 RWDD4Q6NW29 188 aaKnown RBP19.3■□□□□ 0.68
COL5A3-201ENST00000264828 FAM196AQ6ZSG2 479 aa19.3■□□□□ 0.68
COL5A3-201ENST00000264828 DCTN3O75935 186 aa19.3■□□□□ 0.68
COL5A3-201ENST00000264828 PLEKHA8P1O95397 391 aa19.3■□□□□ 0.68
COL5A3-201ENST00000264828 MYL1P05976 194 aa19.3■□□□□ 0.68
COL5A3-201ENST00000264828 STAT2P52630 851 aa19.3■□□□□ 0.68
COL5A3-201ENST00000264828 DBNDD1Q9H9R9 158 aa19.3■□□□□ 0.68
COL5A3-201ENST00000264828 EPHB1P54762 984 aa19.3■□□□□ 0.68
COL5A3-201ENST00000264828 PSMD2Q13200 908 aa19.3■□□□□ 0.68
COL5A3-201ENST00000264828 ZNF772Q68DY9 489 aaPredicted RBP19.3■□□□□ 0.68
COL5A3-201ENST00000264828 DPY19L2Q6NUT2 758 aa19.3■□□□□ 0.68
COL5A3-201ENST00000264828 KLC3Q6P597 504 aa19.3■□□□□ 0.68
COL5A3-201ENST00000264828 PASD1Q8IV76 773 aa19.3■□□□□ 0.68
COL5A3-201ENST00000264828 COPEO14579 308 aa19.29■□□□□ 0.68
COL5A3-201ENST00000264828 PDIK1LQ8N165 341 aa19.29■□□□□ 0.68
COL5A3-201ENST00000264828 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.29■□□□□ 0.68
COL5A3-201ENST00000264828 FAM81BQ96LP2 452 aa19.29■□□□□ 0.68
COL5A3-201ENST00000264828 TRPV6Q9H1D0 765 aa19.29■□□□□ 0.68
COL5A3-201ENST00000264828 LEMD3Q9Y2U8 911 aa19.29■□□□□ 0.68
COL5A3-201ENST00000264828 IQGAP3Q86VI3 1631 aa19.29■□□□□ 0.68
COL5A3-201ENST00000264828 RXRBP28702 533 aa19.29■□□□□ 0.68
COL5A3-201ENST00000264828 GFPT1Q06210 699 aaPredicted RBP19.29■□□□□ 0.68
COL5A3-201ENST00000264828 SPARCL1Q14515 664 aa19.29■□□□□ 0.68
COL5A3-201ENST00000264828 EIF2AQ9BY44 585 aaKnown RBP19.29■□□□□ 0.68
COL5A3-201ENST00000264828 BMP3P12645 472 aa19.29■□□□□ 0.68
COL5A3-201ENST00000264828 SLC24A3Q9HC58 644 aa19.29■□□□□ 0.68
COL5A3-201ENST00000264828 ZFP69BQ9UJL9 534 aa19.29■□□□□ 0.68
COL5A3-201ENST00000264828 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.29■□□□□ 0.68
COL5A3-201ENST00000264828 TTC1Q99614 292 aa19.29■□□□□ 0.68
COL5A3-201ENST00000264828 NBPF3Q9H094 633 aa19.29■□□□□ 0.68
COL5A3-201ENST00000264828 OSBPL3Q9H4L5 887 aa19.29■□□□□ 0.68
COL5A3-201ENST00000264828 CLTCL1P53675 1640 aa19.29■□□□□ 0.68
COL5A3-201ENST00000264828 MYO1EQ12965 1108 aa19.29■□□□□ 0.68
COL5A3-201ENST00000264828 MSTO1Q9BUK6 570 aa19.29■□□□□ 0.68
COL5A3-201ENST00000264828 RASA4BC9J798 803 aa19.28■□□□□ 0.68
COL5A3-201ENST00000264828 RASA4O43374 803 aa19.28■□□□□ 0.68
COL5A3-201ENST00000264828 ZNF394Q53GI3 561 aa19.28■□□□□ 0.68
COL5A3-201ENST00000264828 GLE1Q53GS7 698 aaKnown RBP19.28■□□□□ 0.68
COL5A3-201ENST00000264828 ERICH1Q86X53 443 aa19.28■□□□□ 0.68
COL5A3-201ENST00000264828 CCDC17Q96LX7 622 aa19.28■□□□□ 0.68
COL5A3-201ENST00000264828 GJB4Q9NTQ9 266 aa19.28■□□□□ 0.68
COL5A3-201ENST00000264828 CHEK2O96017 543 aa19.28■□□□□ 0.68
COL5A3-201ENST00000264828 YIPF3Q9GZM5 350 aa19.28■□□□□ 0.68
COL5A3-201ENST00000264828 MCF2P10911 925 aa19.28■□□□□ 0.68
COL5A3-201ENST00000264828 HSPA8P11142 646 aaKnown RBP19.28■□□□□ 0.68
COL5A3-201ENST00000264828 CDC37Q16543 378 aaPredicted RBP19.28■□□□□ 0.68
COL5A3-201ENST00000264828 EMBQ6PCB8 327 aa19.28■□□□□ 0.68
COL5A3-201ENST00000264828 PRR36Q9H6K5 1346 aa19.28■□□□□ 0.68
COL5A3-201ENST00000264828 ZNF233A6NK53 670 aa19.28■□□□□ 0.68
COL5A3-201ENST00000264828 NCK2O43639 380 aa19.28■□□□□ 0.68
COL5A3-201ENST00000264828 GPR108Q9NPR9 543 aa19.28■□□□□ 0.68
COL5A3-201ENST00000264828 CDC42BPAQ5VT25 1732 aa19.28■□□□□ 0.68
COL5A3-201ENST00000264828 SMAD1Q15797 465 aaKnown RBP19.27■□□□□ 0.68
COL5A3-201ENST00000264828 PPP6R3Q5H9R7 873 aaPredicted RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms