RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.55□□□□□ -0.4
DNMT3A-201ENST00000264709 STRBPQ96SI9 672 aaKnown RBP12.55□□□□□ -0.4
DNMT3A-201ENST00000264709 PIK3C2BO00750 1634 aa12.54□□□□□ -0.4
DNMT3A-201ENST00000264709 VHLP40337 213 aa12.54□□□□□ -0.4
DNMT3A-201ENST00000264709 SDCCAG3Q96C92 435 aa12.54□□□□□ -0.4
DNMT3A-201ENST00000264709 IRX2Q9BZI1 471 aaPredicted RBP12.54□□□□□ -0.4
DNMT3A-201ENST00000264709 TRIM9Q9C026 710 aa12.54□□□□□ -0.4
DNMT3A-201ENST00000264709 ANKFY1Q9P2R3 1169 aa12.54□□□□□ -0.4
DNMT3A-201ENST00000264709 AKAP12Q02952 1782 aa12.54□□□□□ -0.4
DNMT3A-201ENST00000264709 PRDM1O75626 825 aa12.54□□□□□ -0.4
DNMT3A-201ENST00000264709 HAUS5O94927 633 aa12.54□□□□□ -0.4
DNMT3A-201ENST00000264709 CDAN1Q8IWY9 1227 aa12.54□□□□□ -0.4
DNMT3A-201ENST00000264709 ZNF653Q96CK0 615 aa12.54□□□□□ -0.4
DNMT3A-201ENST00000264709 AHCYL1O43865 530 aa12.54□□□□□ -0.4
DNMT3A-201ENST00000264709 MYL7Q01449 175 aa12.54□□□□□ -0.4
DNMT3A-201ENST00000264709 PDXDC1Q6P996 788 aa12.54□□□□□ -0.4
DNMT3A-201ENST00000264709 THOC1Q96FV9 657 aaKnown RBP12.54□□□□□ -0.4
DNMT3A-201ENST00000264709 RBM12Q9NTZ6 932 aaKnown RBP12.54□□□□□ -0.4
DNMT3A-201ENST00000264709 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.54□□□□□ -0.4
DNMT3A-201ENST00000264709 HARSP12081 509 aaKnown RBP12.54□□□□□ -0.4
DNMT3A-201ENST00000264709 GJC1P36383 396 aa12.54□□□□□ -0.4
DNMT3A-201ENST00000264709 TPTE2Q6XPS3 522 aa12.54□□□□□ -0.4
DNMT3A-201ENST00000264709 CRLF3Q8IUI8 442 aa12.54□□□□□ -0.4
DNMT3A-201ENST00000264709 ICA1LQ8NDH6 482 aa12.54□□□□□ -0.4
DNMT3A-201ENST00000264709 RBM41Q96IZ5 413 aaKnown RBP12.54□□□□□ -0.4
DNMT3A-201ENST00000264709 ADRM1Q16186 407 aa12.54□□□□□ -0.4
DNMT3A-201ENST00000264709 BSDC1Q9NW68 430 aaPredicted RBP12.54□□□□□ -0.4
DNMT3A-201ENST00000264709 ZSWIM5Q9P217 1185 aa12.54□□□□□ -0.4
DNMT3A-201ENST00000264709 ESYT3A0FGR9 886 aa12.54□□□□□ -0.4
DNMT3A-201ENST00000264709 STRNO43815 780 aa12.54□□□□□ -0.4
DNMT3A-201ENST00000264709 FMR1Q06787 632 aaKnown RBP eCLIP12.54□□□□□ -0.4
DNMT3A-201ENST00000264709 FRMD5Q7Z6J6 570 aa12.54□□□□□ -0.4
DNMT3A-201ENST00000264709 RGL1Q9NZL6 768 aa12.54□□□□□ -0.4
DNMT3A-201ENST00000264709 RIPK1Q13546 671 aa12.54□□□□□ -0.4
DNMT3A-201ENST00000264709 LRGUKQ96M69 825 aa12.54□□□□□ -0.4
DNMT3A-201ENST00000264709 ZIM3Q96PE6 472 aa12.54□□□□□ -0.4
DNMT3A-201ENST00000264709 TMEM206Q9H813 350 aa12.54□□□□□ -0.4
DNMT3A-201ENST00000264709 FSCBQ5H9T9 825 aa12.53□□□□□ -0.4
DNMT3A-201ENST00000264709 KRT80Q6KB66 452 aa12.53□□□□□ -0.4
DNMT3A-201ENST00000264709 PSTPIP2Q9H939 334 aa12.53□□□□□ -0.4
DNMT3A-201ENST00000264709 TMOD4Q9NZQ9 345 aa12.53□□□□□ -0.4
DNMT3A-201ENST00000264709 TRIM33Q9UPN9 1127 aa12.53□□□□□ -0.4
DNMT3A-201ENST00000264709 GDAQ9Y2T3 454 aa12.53□□□□□ -0.4
DNMT3A-201ENST00000264709 USP11P51784 963 aa12.53□□□□□ -0.4
DNMT3A-201ENST00000264709 PTK2Q05397 1052 aa12.53□□□□□ -0.4
DNMT3A-201ENST00000264709 HADHQ16836 314 aaKnown RBP12.53□□□□□ -0.4
DNMT3A-201ENST00000264709 COL23A1Q86Y22 540 aaPredicted RBP12.53□□□□□ -0.4
DNMT3A-201ENST00000264709 ANKS1AQ92625 1134 aa12.53□□□□□ -0.4
DNMT3A-201ENST00000264709 LRRC59Q96AG4 307 aaKnown RBP12.53□□□□□ -0.4
DNMT3A-201ENST00000264709 RNPC3Q96LT9 517 aaKnown RBP12.53□□□□□ -0.4
DNMT3A-201ENST00000264709 EYA3Q99504 573 aa12.53□□□□□ -0.4
DNMT3A-201ENST00000264709 SEL1LQ9UBV2 794 aa12.53□□□□□ -0.4
DNMT3A-201ENST00000264709 AP5Z1O43299 807 aa12.53□□□□□ -0.4
DNMT3A-201ENST00000264709 TFAP4Q01664 338 aa12.53□□□□□ -0.4
DNMT3A-201ENST00000264709 BFSP1Q12934 665 aa12.53□□□□□ -0.4
DNMT3A-201ENST00000264709 MAP7D3Q8IWC1 876 aa12.53□□□□□ -0.4
DNMT3A-201ENST00000264709 FAM186BQ8IYM0 893 aa12.53□□□□□ -0.4
DNMT3A-201ENST00000264709 C7orf25Q9BPX7 421 aa12.53□□□□□ -0.4
DNMT3A-201ENST00000264709 LRRC10BA6NIK2 292 aa12.53□□□□□ -0.4
DNMT3A-201ENST00000264709 KPNA2P52292 529 aaKnown RBP12.53□□□□□ -0.4
DNMT3A-201ENST00000264709 TMED2Q15363 201 aa12.53□□□□□ -0.4
DNMT3A-201ENST00000264709 ACTRT1Q8TDG2 376 aa12.53□□□□□ -0.4
DNMT3A-201ENST00000264709 NIP7Q9Y221 180 aaKnown RBP eCLIP12.53□□□□□ -0.4
DNMT3A-201ENST00000264709 CEP170BQ9Y4F5 1589 aaPredicted RBP12.53□□□□□ -0.4
DNMT3A-201ENST00000264709 LRRIQ3A6PVS8 624 aaPredicted RBP12.53□□□□□ -0.4
DNMT3A-201ENST00000264709 PDHA1P08559 390 aa12.53□□□□□ -0.4
DNMT3A-201ENST00000264709 FNTAP49354 379 aa12.53□□□□□ -0.4
DNMT3A-201ENST00000264709 NPEPPSP55786 919 aa12.53□□□□□ -0.4
DNMT3A-201ENST00000264709 PDIA5Q14554 519 aa12.53□□□□□ -0.4
DNMT3A-201ENST00000264709 KIAA1755Q5JYT7 1200 aa12.53□□□□□ -0.4
DNMT3A-201ENST00000264709 SERPINB12Q96P63 405 aa12.53□□□□□ -0.4
DNMT3A-201ENST00000264709 ORC4O43929 436 aa12.53□□□□□ -0.4
DNMT3A-201ENST00000264709 MYBL1P10243 752 aa12.53□□□□□ -0.4
DNMT3A-201ENST00000264709 KCNA3P22001 575 aa12.53□□□□□ -0.4
DNMT3A-201ENST00000264709 PAPOLAP51003 745 aaKnown RBP12.53□□□□□ -0.4
DNMT3A-201ENST00000264709 CTNNAL1Q9UBT7 734 aa12.53□□□□□ -0.4
DNMT3A-201ENST00000264709 CORO1CQ9ULV4 474 aaPredicted RBP12.53□□□□□ -0.4
DNMT3A-201ENST00000264709 EIF2AQ9BY44 585 aaKnown RBP12.52□□□□□ -0.4
DNMT3A-201ENST00000264709 IFT122Q9HBG6 1241 aa12.52□□□□□ -0.4
DNMT3A-201ENST00000264709 ZHX2Q9Y6X8 837 aa12.52□□□□□ -0.4
DNMT3A-201ENST00000264709 ARL4CP56559 192 aa12.52□□□□□ -0.4
DNMT3A-201ENST00000264709 SLC4A8Q2Y0W8 1093 aa12.52□□□□□ -0.4
DNMT3A-201ENST00000264709 GRAMD4Q6IC98 578 aa12.52□□□□□ -0.4
DNMT3A-201ENST00000264709 WDR75Q8IWA0 830 aaKnown RBP12.52□□□□□ -0.4
DNMT3A-201ENST00000264709 PUS7LQ9H0K6 701 aaKnown RBP12.52□□□□□ -0.4
DNMT3A-201ENST00000264709 PHKG2P15735 406 aa12.52□□□□□ -0.41
DNMT3A-201ENST00000264709 CHN1P15882 459 aa12.52□□□□□ -0.41
DNMT3A-201ENST00000264709 CTCFP49711 727 aaPredicted RBP12.52□□□□□ -0.41
DNMT3A-201ENST00000264709 CCDC117Q8IWD4 279 aaPredicted RBP12.52□□□□□ -0.41
DNMT3A-201ENST00000264709 CTAGE3PQ8IX95 158 aa12.52□□□□□ -0.41
DNMT3A-201ENST00000264709 GSPT2Q8IYD1 628 aaKnown RBP12.52□□□□□ -0.41
DNMT3A-201ENST00000264709 NAF1Q96HR8 494 aaKnown RBP12.52□□□□□ -0.41
DNMT3A-201ENST00000264709 SETDB2Q96T68 719 aa12.52□□□□□ -0.41
DNMT3A-201ENST00000264709 TMEM131LA2VDJ0 1609 aa12.52□□□□□ -0.41
DNMT3A-201ENST00000264709 CASZ1Q86V15 1759 aa12.52□□□□□ -0.41
DNMT3A-201ENST00000264709 TTC36A6NLP5 189 aa12.52□□□□□ -0.41
DNMT3A-201ENST00000264709 TCP11X1B4DZS4 312 aa12.52□□□□□ -0.41
DNMT3A-201ENST00000264709 C21orf2O43822 256 aa12.52□□□□□ -0.41
DNMT3A-201ENST00000264709 MT-ND3P03897 115 aa12.52□□□□□ -0.41
DNMT3A-201ENST00000264709 ATP5BP06576 529 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms