RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 MAGED2Q9UNF1 606 aaPredicted RBP18.13■□□□□ 0.49
CROCCP3-201ENST00000263511 PREX2Q70Z35 1606 aa18.13■□□□□ 0.49
CROCCP3-201ENST00000263511 MT-ND3P03897 115 aa18.13■□□□□ 0.49
CROCCP3-201ENST00000263511 IFNAR2P48551 515 aa18.13■□□□□ 0.49
CROCCP3-201ENST00000263511 GRM4Q14833 912 aa18.13■□□□□ 0.49
CROCCP3-201ENST00000263511 ENAHQ8N8S7 591 aaPredicted RBP18.13■□□□□ 0.49
CROCCP3-201ENST00000263511 ZNF579Q8NAF0 562 aaKnown RBP18.13■□□□□ 0.49
CROCCP3-201ENST00000263511 GDAP1Q8TB36 358 aa18.13■□□□□ 0.49
CROCCP3-201ENST00000263511 PSPC1Q8WXF1 523 aaKnown RBP18.13■□□□□ 0.49
CROCCP3-201ENST00000263511 ISCA1Q9BUE6 129 aa18.13■□□□□ 0.49
CROCCP3-201ENST00000263511 Q9H521 79 aa18.13■□□□□ 0.49
CROCCP3-201ENST00000263511 FNDC3AQ9Y2H6 1198 aaKnown RBP18.13■□□□□ 0.49
CROCCP3-201ENST00000263511 FAN1Q9Y2M0 1017 aa18.13■□□□□ 0.49
CROCCP3-201ENST00000263511 PSMA2P25787 234 aa18.13■□□□□ 0.49
CROCCP3-201ENST00000263511 RWDD2BP57060 319 aa18.13■□□□□ 0.49
CROCCP3-201ENST00000263511 TWF2Q6IBS0 349 aaKnown RBP18.13■□□□□ 0.49
CROCCP3-201ENST00000263511 PCGF5Q86SE9 256 aa18.13■□□□□ 0.49
CROCCP3-201ENST00000263511 SP8Q8IXZ3 490 aa18.13■□□□□ 0.49
CROCCP3-201ENST00000263511 GBP7Q8N8V2 638 aaPredicted RBP18.13■□□□□ 0.49
CROCCP3-201ENST00000263511 SLITRK6Q9H5Y7 841 aa18.13■□□□□ 0.49
CROCCP3-201ENST00000263511 PDE11AQ9HCR9 933 aa18.13■□□□□ 0.49
CROCCP3-201ENST00000263511 FAM8A1Q9UBU6 413 aa18.13■□□□□ 0.49
CROCCP3-201ENST00000263511 SPDYE2BA6NHP3 402 aa18.12■□□□□ 0.49
CROCCP3-201ENST00000263511 HMGB1P1B2RPK0 211 aaPredicted RBP18.12■□□□□ 0.49
CROCCP3-201ENST00000263511 SPDYE6P0CI01 402 aa18.12■□□□□ 0.49
CROCCP3-201ENST00000263511 PRPF38AQ8NAV1 312 aaKnown RBP18.12■□□□□ 0.49
CROCCP3-201ENST00000263511 SLC44A5Q8NCS7 719 aa18.12■□□□□ 0.49
CROCCP3-201ENST00000263511 NGRNQ9NPE2 291 aaKnown RBP18.12■□□□□ 0.49
CROCCP3-201ENST00000263511 CAPN7Q9Y6W3 813 aa18.12■□□□□ 0.49
CROCCP3-201ENST00000263511 CXCR5P32302 372 aa18.12■□□□□ 0.49
CROCCP3-201ENST00000263511 TMED2Q15363 201 aa18.12■□□□□ 0.49
CROCCP3-201ENST00000263511 ALX1Q15699 326 aa18.12■□□□□ 0.49
CROCCP3-201ENST00000263511 SFR1Q86XK3 245 aa18.12■□□□□ 0.49
CROCCP3-201ENST00000263511 ZNF302Q9NR11 478 aa18.12■□□□□ 0.49
CROCCP3-201ENST00000263511 PLA2R1Q13018 1463 aa18.12■□□□□ 0.49
CROCCP3-201ENST00000263511 PPARGP37231 505 aaPredicted RBP18.12■□□□□ 0.49
CROCCP3-201ENST00000263511 DHX9Q08211 1270 aaKnown RBP18.12■□□□□ 0.49
CROCCP3-201ENST00000263511 NOP9Q86U38 636 aaKnown RBP18.12■□□□□ 0.49
CROCCP3-201ENST00000263511 NDUFAF2Q8N183 169 aa18.12■□□□□ 0.49
CROCCP3-201ENST00000263511 PROM2Q8N271 834 aa18.12■□□□□ 0.49
CROCCP3-201ENST00000263511 RFX7Q2KHR2 1363 aa18.12■□□□□ 0.49
CROCCP3-201ENST00000263511 TXNRD1Q16881 649 aa18.12■□□□□ 0.49
CROCCP3-201ENST00000263511 ZNF568Q3ZCX4 644 aa18.12■□□□□ 0.49
CROCCP3-201ENST00000263511 TMEM35BQ8NCS4 154 aa18.12■□□□□ 0.49
CROCCP3-201ENST00000263511 CPSF2Q9P2I0 782 aaKnown RBP18.12■□□□□ 0.49
CROCCP3-201ENST00000263511 ADAMTS1Q9UHI8 967 aa18.12■□□□□ 0.49
CROCCP3-201ENST00000263511 MID2Q9UJV3 735 aa18.12■□□□□ 0.49
CROCCP3-201ENST00000263511 F5H6K3 240 aa18.11■□□□□ 0.49
CROCCP3-201ENST00000263511 EVI5O60447 810 aa18.11■□□□□ 0.49
CROCCP3-201ENST00000263511 KLRC3Q07444 240 aa18.11■□□□□ 0.49
CROCCP3-201ENST00000263511 CYB5R4Q7L1T6 521 aa18.11■□□□□ 0.49
CROCCP3-201ENST00000263511 TACO1Q9BSH4 297 aaKnown RBP18.11■□□□□ 0.49
CROCCP3-201ENST00000263511 DNAJC12Q9UKB3 198 aa18.11■□□□□ 0.49
CROCCP3-201ENST00000263511 HUS1O60921 280 aa18.11■□□□□ 0.49
CROCCP3-201ENST00000263511 COPB2P35606 906 aa18.11■□□□□ 0.49
CROCCP3-201ENST00000263511 PDIK1LQ8N165 341 aa18.11■□□□□ 0.49
CROCCP3-201ENST00000263511 SPDYE1Q8NFV5 336 aaPredicted RBP18.11■□□□□ 0.49
CROCCP3-201ENST00000263511 C2orf40Q9H1Z8 148 aa18.11■□□□□ 0.49
CROCCP3-201ENST00000263511 GDAQ9Y2T3 454 aa18.11■□□□□ 0.49
CROCCP3-201ENST00000263511 CYP27A1Q02318 531 aa18.11■□□□□ 0.49
CROCCP3-201ENST00000263511 CDO1Q16878 200 aa18.11■□□□□ 0.49
CROCCP3-201ENST00000263511 RAD54LQ92698 747 aa18.11■□□□□ 0.49
CROCCP3-201ENST00000263511 MTRQ99707 1265 aa18.11■□□□□ 0.49
CROCCP3-201ENST00000263511 CPVLQ9H3G5 476 aa18.11■□□□□ 0.49
CROCCP3-201ENST00000263511 INPP5FQ9Y2H2 1132 aa18.11■□□□□ 0.49
CROCCP3-201ENST00000263511 PVALEFA0A1B0GWK0 134 aa18.11■□□□□ 0.49
CROCCP3-201ENST00000263511 NR3C1P04150 777 aa18.11■□□□□ 0.49
CROCCP3-201ENST00000263511 P4HBP07237 508 aaKnown RBP18.11■□□□□ 0.49
CROCCP3-201ENST00000263511 HOXD10P28358 340 aa18.11■□□□□ 0.49
CROCCP3-201ENST00000263511 GJD4Q96KN9 370 aaPredicted RBP18.11■□□□□ 0.49
CROCCP3-201ENST00000263511 ADAM22Q9P0K1 906 aa18.11■□□□□ 0.49
CROCCP3-201ENST00000263511 ZCCHC11Q5TAX3 1644 aaKnown RBP18.11■□□□□ 0.49
CROCCP3-201ENST00000263511 C2orf54Q08AI8 447 aa18.1■□□□□ 0.49
CROCCP3-201ENST00000263511 TOB2Q14106 344 aaPredicted RBP18.1■□□□□ 0.49
CROCCP3-201ENST00000263511 BBS9Q3SYG4 887 aa18.1■□□□□ 0.49
CROCCP3-201ENST00000263511 BEST2Q8NFU1 509 aa18.1■□□□□ 0.49
CROCCP3-201ENST00000263511 ACAD9Q9H845 621 aa18.1■□□□□ 0.49
CROCCP3-201ENST00000263511 PMLP29590 882 aa18.1■□□□□ 0.49
CROCCP3-201ENST00000263511 ZNF699Q32M78 642 aa18.1■□□□□ 0.49
CROCCP3-201ENST00000263511 RWDD4Q6NW29 188 aaKnown RBP18.1■□□□□ 0.49
CROCCP3-201ENST00000263511 HERC5Q9UII4 1024 aaKnown RBP18.1■□□□□ 0.49
CROCCP3-201ENST00000263511 DENND3A2RUS2 1198 aa18.1■□□□□ 0.49
CROCCP3-201ENST00000263511 CLGNO14967 610 aa18.1■□□□□ 0.49
CROCCP3-201ENST00000263511 CASP2P42575 452 aa18.1■□□□□ 0.49
CROCCP3-201ENST00000263511 QARSP47897 775 aaKnown RBP18.1■□□□□ 0.49
CROCCP3-201ENST00000263511 TSPY1Q01534 308 aa18.1■□□□□ 0.49
CROCCP3-201ENST00000263511 DYDC2Q96IM9 177 aa18.1■□□□□ 0.49
CROCCP3-201ENST00000263511 ZWILCHQ9H900 591 aa18.1■□□□□ 0.49
CROCCP3-201ENST00000263511 ATP8B1O43520 1251 aa18.1■□□□□ 0.49
CROCCP3-201ENST00000263511 MAP2K2P36507 400 aa18.1■□□□□ 0.49
CROCCP3-201ENST00000263511 DR1Q01658 176 aa18.1■□□□□ 0.49
CROCCP3-201ENST00000263511 SPOPLQ6IQ16 392 aa18.1■□□□□ 0.49
CROCCP3-201ENST00000263511 CCDC197Q8NCU1 140 aa18.1■□□□□ 0.49
CROCCP3-201ENST00000263511 LCMT1Q9UIC8 334 aa18.1■□□□□ 0.49
CROCCP3-201ENST00000263511 BNIP3LO60238 219 aa18.09■□□□□ 0.49
CROCCP3-201ENST00000263511 NMT2O60551 498 aa18.09■□□□□ 0.49
CROCCP3-201ENST00000263511 SERPINB6P35237 376 aa18.09■□□□□ 0.49
CROCCP3-201ENST00000263511 TTI1O43156 1089 aa18.09■□□□□ 0.49
CROCCP3-201ENST00000263511 TRIP13Q15645 432 aaPredicted RBP18.09■□□□□ 0.49
CROCCP3-201ENST00000263511 OTUD5Q96G74 571 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms