RNA–Protein interactions for RNA: ENST00000263401.9

COMMD9-201, Transcript of COMM domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD9, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-201ENST00000263401 MATR3P43243 847 aaKnown RBP eCLIP11.48□□□□□ -0.57
COMMD9-201ENST00000263401 RPS6P62753 249 aaKnown RBP11.48□□□□□ -0.57
COMMD9-201ENST00000263401 UGCGQ16739 394 aa11.48□□□□□ -0.57
COMMD9-201ENST00000263401 FKBP1CQ5VVH2 108 aa11.48□□□□□ -0.57
COMMD9-201ENST00000263401 ATG4CQ96DT6 458 aa11.48□□□□□ -0.57
COMMD9-201ENST00000263401 FIZ1Q96SL8 496 aa11.48□□□□□ -0.57
COMMD9-201ENST00000263401 TEKT3Q9BXF9 490 aa11.48□□□□□ -0.57
COMMD9-201ENST00000263401 ABCB6Q9NP58 842 aa11.48□□□□□ -0.57
COMMD9-201ENST00000263401 FAM53CQ9NYF3 392 aa11.48□□□□□ -0.57
COMMD9-201ENST00000263401 MYO1AQ9UBC5 1043 aa11.48□□□□□ -0.57
COMMD9-201ENST00000263401 PACSIN2Q9UNF0 486 aaPredicted RBP11.48□□□□□ -0.57
COMMD9-201ENST00000263401 ZNF541Q9H0D2 1346 aa11.47□□□□□ -0.57
COMMD9-201ENST00000263401 HIP1RO75146 1068 aa11.47□□□□□ -0.57
COMMD9-201ENST00000263401 HSD17B4P51659 736 aa11.47□□□□□ -0.57
COMMD9-201ENST00000263401 GYS2P54840 703 aa11.47□□□□□ -0.57
COMMD9-201ENST00000263401 SP4Q02446 784 aa11.47□□□□□ -0.57
COMMD9-201ENST00000263401 EDRF1Q3B7T1 1238 aa11.47□□□□□ -0.57
COMMD9-201ENST00000263401 ODR4Q5SWX8 454 aa11.47□□□□□ -0.57
COMMD9-201ENST00000263401 DPY19L2P1Q6NXN4 242 aa11.47□□□□□ -0.57
COMMD9-201ENST00000263401 ZC3H3Q8IXZ2 948 aaKnown RBP11.47□□□□□ -0.57
COMMD9-201ENST00000263401 DAW1Q8N136 415 aa11.47□□□□□ -0.57
COMMD9-201ENST00000263401 PRPF38AQ8NAV1 312 aaKnown RBP11.47□□□□□ -0.57
COMMD9-201ENST00000263401 RBM46Q8TBY0 533 aaKnown RBP11.47□□□□□ -0.57
COMMD9-201ENST00000263401 CAGE1Q8TC20 777 aa11.47□□□□□ -0.57
COMMD9-201ENST00000263401 PCIF1Q9H4Z3 704 aa11.47□□□□□ -0.57
COMMD9-201ENST00000263401 GPRC5CQ9NQ84 441 aa11.47□□□□□ -0.57
COMMD9-201ENST00000263401 TRAF3IP3Q9Y228 551 aa11.47□□□□□ -0.57
COMMD9-201ENST00000263401 DOCK5Q9H7D0 1870 aa11.47□□□□□ -0.57
COMMD9-201ENST00000263401 CENPFP49454 3210 aa11.47□□□□□ -0.57
COMMD9-201ENST00000263401 PON1P27169 355 aa11.47□□□□□ -0.57
COMMD9-201ENST00000263401 SOX10P56693 466 aa11.47□□□□□ -0.57
COMMD9-201ENST00000263401 CDK17Q00537 523 aa11.47□□□□□ -0.57
COMMD9-201ENST00000263401 BMS1Q14692 1282 aaKnown RBP11.47□□□□□ -0.57
COMMD9-201ENST00000263401 R3HDM1Q15032 1099 aaKnown RBP11.47□□□□□ -0.57
COMMD9-201ENST00000263401 WHAMMP3Q1A5X7 153 aa11.47□□□□□ -0.57
COMMD9-201ENST00000263401 LONRF2Q1L5Z9 754 aa11.47□□□□□ -0.57
COMMD9-201ENST00000263401 MCTP2Q6DN12 878 aa11.47□□□□□ -0.57
COMMD9-201ENST00000263401 MIER3Q7Z3K6 550 aa11.47□□□□□ -0.57
COMMD9-201ENST00000263401 SYTL5Q8TDW5 730 aaPredicted RBP11.47□□□□□ -0.57
COMMD9-201ENST00000263401 PARVGQ9HBI0 331 aa11.47□□□□□ -0.57
COMMD9-201ENST00000263401 DHX15O43143 795 aaKnown RBP11.46□□□□□ -0.57
COMMD9-201ENST00000263401 USO1O60763 962 aaKnown RBP11.46□□□□□ -0.57
COMMD9-201ENST00000263401 AFPP02771 609 aaKnown RBP11.46□□□□□ -0.57
COMMD9-201ENST00000263401 XRCC5P13010 732 aaKnown RBP11.46□□□□□ -0.57
COMMD9-201ENST00000263401 TKFCQ3LXA3 575 aa11.46□□□□□ -0.57
COMMD9-201ENST00000263401 PLA2G4FQ68DD2 849 aa11.46□□□□□ -0.57
COMMD9-201ENST00000263401 FAM178BQ8IXR5 827 aa11.46□□□□□ -0.57
COMMD9-201ENST00000263401 SLC35C1Q96A29 364 aa11.46□□□□□ -0.57
COMMD9-201ENST00000263401 ELMO3Q96BJ8 720 aa11.46□□□□□ -0.57
COMMD9-201ENST00000263401 MS4A14Q96JA4 679 aa11.46□□□□□ -0.57
COMMD9-201ENST00000263401 TUFT1Q9NNX1 390 aa11.46□□□□□ -0.57
COMMD9-201ENST00000263401 TYW1Q9NV66 732 aaKnown RBP11.46□□□□□ -0.57
COMMD9-201ENST00000263401 TESPA1A2RU30 521 aaPredicted RBP11.46□□□□□ -0.57
COMMD9-201ENST00000263401 ARHGEF35A5YM69 484 aa11.46□□□□□ -0.57
COMMD9-201ENST00000263401 PDXKO00764 312 aa11.46□□□□□ -0.57
COMMD9-201ENST00000263401 CALUO43852 315 aaPredicted RBP11.46□□□□□ -0.57
COMMD9-201ENST00000263401 FTCDO95954 541 aa11.46□□□□□ -0.57
COMMD9-201ENST00000263401 HMGCS2P54868 508 aa11.46□□□□□ -0.57
COMMD9-201ENST00000263401 MARSP56192 900 aaKnown RBP11.46□□□□□ -0.57
COMMD9-201ENST00000263401 RNASE9P60153 205 aaKnown RBP11.46□□□□□ -0.57
COMMD9-201ENST00000263401 MAP3K10Q02779 954 aa11.46□□□□□ -0.57
COMMD9-201ENST00000263401 KLHL30Q0D2K2 578 aa11.46□□□□□ -0.57
COMMD9-201ENST00000263401 PAPD7Q5XG87 772 aaKnown RBP11.46□□□□□ -0.57
COMMD9-201ENST00000263401 NLGN2Q8NFZ4 835 aa11.46□□□□□ -0.57
COMMD9-201ENST00000263401 TRPM4Q8TD43 1214 aa11.46□□□□□ -0.57
COMMD9-201ENST00000263401 SLC38A10Q9HBR0 1119 aa11.46□□□□□ -0.57
COMMD9-201ENST00000263401 ARFGAP3Q9NP61 516 aa11.46□□□□□ -0.57
COMMD9-201ENST00000263401 GCNT4Q9P109 453 aa11.46□□□□□ -0.57
COMMD9-201ENST00000263401 SYNPO2Q9UMS6 1093 aa11.46□□□□□ -0.57
COMMD9-201ENST00000263401 ERICH4A6NGS2 130 aa11.46□□□□□ -0.58
COMMD9-201ENST00000263401 GNA14O95837 355 aa11.46□□□□□ -0.58
COMMD9-201ENST00000263401 UCHL3P15374 230 aa11.46□□□□□ -0.58
COMMD9-201ENST00000263401 NPEPPSP55786 919 aa11.46□□□□□ -0.58
COMMD9-201ENST00000263401 PTK2Q05397 1052 aa11.46□□□□□ -0.58
COMMD9-201ENST00000263401 MAPK7Q13164 816 aa11.46□□□□□ -0.58
COMMD9-201ENST00000263401 EXOC3L4Q17RC7 722 aa11.46□□□□□ -0.58
COMMD9-201ENST00000263401 SLC9C1Q4G0N8 1177 aa11.46□□□□□ -0.58
COMMD9-201ENST00000263401 ANGEL2Q5VTE6 544 aaKnown RBP11.46□□□□□ -0.58
COMMD9-201ENST00000263401 ZNF571Q7Z3V5 609 aaPredicted RBP11.46□□□□□ -0.58
COMMD9-201ENST00000263401 WRNIP1Q96S55 665 aa11.46□□□□□ -0.58
COMMD9-201ENST00000263401 FUT8Q9BYC5 575 aa11.46□□□□□ -0.58
COMMD9-201ENST00000263401 ZHX2Q9Y6X8 837 aa11.46□□□□□ -0.58
COMMD9-201ENST00000263401 COL11A1P12107 1806 aaPredicted RBP11.46□□□□□ -0.58
COMMD9-201ENST00000263401 FRMPD4Q14CM0 1322 aa11.45□□□□□ -0.58
COMMD9-201ENST00000263401 WDR46O15213 610 aaKnown RBP11.45□□□□□ -0.58
COMMD9-201ENST00000263401 KLRC1P26715 233 aa11.45□□□□□ -0.58
COMMD9-201ENST00000263401 EPHA7Q15375 998 aa11.45□□□□□ -0.58
COMMD9-201ENST00000263401 ASIC2Q16515 512 aa11.45□□□□□ -0.58
COMMD9-201ENST00000263401 CBWD6Q4V339 395 aa11.45□□□□□ -0.58
COMMD9-201ENST00000263401 CBWD3Q5JTY5 395 aa11.45□□□□□ -0.58
COMMD9-201ENST00000263401 CBWD5Q5RIA9 395 aa11.45□□□□□ -0.58
COMMD9-201ENST00000263401 KLHDC7AQ5VTJ3 777 aa11.45□□□□□ -0.58
COMMD9-201ENST00000263401 PADI6Q6TGC4 694 aa11.45□□□□□ -0.58
COMMD9-201ENST00000263401 B3GNT9Q6UX72 402 aa11.45□□□□□ -0.58
COMMD9-201ENST00000263401 ZNF720Q7Z2F6 126 aa11.45□□□□□ -0.58
COMMD9-201ENST00000263401 FAM84AQ96KN4 292 aa11.45□□□□□ -0.58
COMMD9-201ENST00000263401 TRERF1Q96PN7 1200 aa11.45□□□□□ -0.58
COMMD9-201ENST00000263401 NACC1Q96RE7 527 aa11.45□□□□□ -0.58
COMMD9-201ENST00000263401 KIFC3Q9BVG8 833 aa11.45□□□□□ -0.58
COMMD9-201ENST00000263401 SIX2Q9NPC8 291 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms