RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.95□□□□□ -0.34
SMG6-201ENST00000263073 CFAP69A5D8W1 941 aa12.95□□□□□ -0.34
SMG6-201ENST00000263073 MARK3P27448 753 aa12.95□□□□□ -0.34
SMG6-201ENST00000263073 PPP6R3Q5H9R7 873 aaPredicted RBP12.95□□□□□ -0.34
SMG6-201ENST00000263073 HEXIM2Q96MH2 286 aaKnown RBP12.95□□□□□ -0.34
SMG6-201ENST00000263073 RNF14Q9UBS8 474 aa12.95□□□□□ -0.34
SMG6-201ENST00000263073 WARS2Q9UGM6 360 aaKnown RBP12.95□□□□□ -0.34
SMG6-201ENST00000263073 LZTS1Q9Y250 596 aa12.95□□□□□ -0.34
SMG6-201ENST00000263073 TTC26A0AVF1 554 aa12.94□□□□□ -0.34
SMG6-201ENST00000263073 COPEO14579 308 aa12.94□□□□□ -0.34
SMG6-201ENST00000263073 TLR3O15455 904 aaKnown RBP12.94□□□□□ -0.34
SMG6-201ENST00000263073 KRT26Q7Z3Y9 468 aa12.94□□□□□ -0.34
SMG6-201ENST00000263073 ARHGEF25Q86VW2 580 aa12.94□□□□□ -0.34
SMG6-201ENST00000263073 OR2W6PQ8NHA6 318 aa12.94□□□□□ -0.34
SMG6-201ENST00000263073 HPS3Q969F9 1004 aa12.94□□□□□ -0.34
SMG6-201ENST00000263073 ZNF277Q9NRM2 450 aaPredicted RBP12.94□□□□□ -0.34
SMG6-201ENST00000263073 FBXL5Q9UKA1 691 aa12.94□□□□□ -0.34
SMG6-201ENST00000263073 DCTN3O75935 186 aa12.94□□□□□ -0.34
SMG6-201ENST00000263073 ERFEQ4G0M1 354 aa12.94□□□□□ -0.34
SMG6-201ENST00000263073 ANGPTL8Q6UXH0 198 aa12.94□□□□□ -0.34
SMG6-201ENST00000263073 CSRNP1Q96S65 589 aa12.94□□□□□ -0.34
SMG6-201ENST00000263073 TRIM55Q9BYV6 548 aa12.94□□□□□ -0.34
SMG6-201ENST00000263073 TMEM260Q9NX78 707 aa12.94□□□□□ -0.34
SMG6-201ENST00000263073 MAP3K15Q6ZN16 1313 aa12.94□□□□□ -0.34
SMG6-201ENST00000263073 IQANK1A0A1B0GTG1 560 aa12.94□□□□□ -0.34
SMG6-201ENST00000263073 WDR64B1ANS9 1081 aa12.94□□□□□ -0.34
SMG6-201ENST00000263073 TTLL1O95922 423 aa12.94□□□□□ -0.34
SMG6-201ENST00000263073 BPIFB4P59827 614 aa12.94□□□□□ -0.34
SMG6-201ENST00000263073 STK17AQ9UEE5 414 aa12.94□□□□□ -0.34
SMG6-201ENST00000263073 ZFYVE16Q7Z3T8 1539 aa12.94□□□□□ -0.34
SMG6-201ENST00000263073 E9PMD0 336 aa12.94□□□□□ -0.34
SMG6-201ENST00000263073 GOLGA8RI6L899 631 aa12.94□□□□□ -0.34
SMG6-201ENST00000263073 CREB3O43889 395 aa12.94□□□□□ -0.34
SMG6-201ENST00000263073 PRPSAP2O60256 369 aa12.94□□□□□ -0.34
SMG6-201ENST00000263073 SUPT3HO75486 399 aa12.94□□□□□ -0.34
SMG6-201ENST00000263073 CDC27P30260 824 aa12.94□□□□□ -0.34
SMG6-201ENST00000263073 ATXN3P54252 364 aaPredicted RBP12.94□□□□□ -0.34
SMG6-201ENST00000263073 C1orf54Q8WWF1 131 aa12.94□□□□□ -0.34
SMG6-201ENST00000263073 CEP19Q96LK0 163 aa12.94□□□□□ -0.34
SMG6-201ENST00000263073 NBPF3Q9H094 633 aa12.94□□□□□ -0.34
SMG6-201ENST00000263073 PARVGQ9HBI0 331 aa12.94□□□□□ -0.34
SMG6-201ENST00000263073 MCF2P10911 925 aa12.94□□□□□ -0.34
SMG6-201ENST00000263073 PSMA2P25787 234 aa12.94□□□□□ -0.34
SMG6-201ENST00000263073 ZBTB17Q13105 803 aa12.94□□□□□ -0.34
SMG6-201ENST00000263073 HEY1Q9Y5J3 304 aa12.94□□□□□ -0.34
SMG6-201ENST00000263073 NEO1Q92859 1461 aa12.93□□□□□ -0.34
SMG6-201ENST00000263073 LGALS16A8MUM7 142 aa12.93□□□□□ -0.34
SMG6-201ENST00000263073 SEC24DO94855 1032 aaPredicted RBP12.93□□□□□ -0.34
SMG6-201ENST00000263073 ZBED1O96006 694 aa12.93□□□□□ -0.34
SMG6-201ENST00000263073 KRT14P02533 472 aa12.93□□□□□ -0.34
SMG6-201ENST00000263073 CNGA1P29973 690 aa12.93□□□□□ -0.34
SMG6-201ENST00000263073 GCLMP48507 274 aa12.93□□□□□ -0.34
SMG6-201ENST00000263073 USP14P54578 494 aa12.93□□□□□ -0.34
SMG6-201ENST00000263073 NSUN2Q08J23 767 aaKnown RBP eCLIP12.93□□□□□ -0.34
SMG6-201ENST00000263073 DRC3Q9H069 523 aa12.93□□□□□ -0.34
SMG6-201ENST00000263073 ZCCHC11Q5TAX3 1644 aaKnown RBP12.93□□□□□ -0.34
SMG6-201ENST00000263073 SRGAP2CP0DJJ0 459 aa12.93□□□□□ -0.34
SMG6-201ENST00000263073 GAP43P17677 238 aa12.93□□□□□ -0.34
SMG6-201ENST00000263073 ARPP19P56211 112 aa12.93□□□□□ -0.34
SMG6-201ENST00000263073 EAPPQ56P03 285 aaPredicted RBP12.93□□□□□ -0.34
SMG6-201ENST00000263073 SRLQ86TD4 932 aa12.93□□□□□ -0.34
SMG6-201ENST00000263073 CCDC124Q96CT7 223 aaKnown RBP12.93□□□□□ -0.34
SMG6-201ENST00000263073 EFHD1Q9BUP0 239 aa12.93□□□□□ -0.34
SMG6-201ENST00000263073 IPO11Q9UI26 975 aaKnown RBP12.93□□□□□ -0.34
SMG6-201ENST00000263073 TFR2Q9UP52 801 aa12.93□□□□□ -0.34
SMG6-201ENST00000263073 SPATA31E1Q6ZUB1 1445 aa12.93□□□□□ -0.34
SMG6-201ENST00000263073 BRAFP15056 766 aa12.93□□□□□ -0.34
SMG6-201ENST00000263073 PEX3P56589 373 aa12.93□□□□□ -0.34
SMG6-201ENST00000263073 ATXN7L3BQ96GX2 97 aa12.93□□□□□ -0.34
SMG6-201ENST00000263073 LRRC37BQ96QE4 947 aa12.93□□□□□ -0.34
SMG6-201ENST00000263073 CCDC90BQ9GZT6 254 aa12.93□□□□□ -0.34
SMG6-201ENST00000263073 DBNDD1Q9H9R9 158 aa12.93□□□□□ -0.34
SMG6-201ENST00000263073 UBN1Q9NPG3 1134 aa12.93□□□□□ -0.34
SMG6-201ENST00000263073 H3BRJ5 948 aa12.93□□□□□ -0.34
SMG6-201ENST00000263073 DAB2P98082 770 aa12.93□□□□□ -0.34
SMG6-201ENST00000263073 ATG16L1Q676U5 607 aa12.93□□□□□ -0.34
SMG6-201ENST00000263073 MIGA2Q7L4E1 593 aa12.93□□□□□ -0.34
SMG6-201ENST00000263073 KRT27Q7Z3Y8 459 aa12.93□□□□□ -0.34
SMG6-201ENST00000263073 TRIM59Q8IWR1 403 aa12.93□□□□□ -0.34
SMG6-201ENST00000263073 ATP6V1G3Q96LB4 118 aa12.93□□□□□ -0.34
SMG6-201ENST00000263073 VPS11Q9H270 941 aa12.93□□□□□ -0.34
SMG6-201ENST00000263073 KLHL11Q9NVR0 708 aa12.93□□□□□ -0.34
SMG6-201ENST00000263073 AMACRQ9UHK6 382 aa12.93□□□□□ -0.34
SMG6-201ENST00000263073 SUFUQ9UMX1 484 aa12.93□□□□□ -0.34
SMG6-201ENST00000263073 ZBTB1Q9Y2K1 713 aa12.93□□□□□ -0.34
SMG6-201ENST00000263073 PHF20L1A8MW92 1017 aa12.93□□□□□ -0.34
SMG6-201ENST00000263073 DIAPH2O60879 1101 aa12.93□□□□□ -0.34
SMG6-201ENST00000263073 DNAJC8O75937 253 aaPredicted RBP12.93□□□□□ -0.34
SMG6-201ENST00000263073 MCAMP43121 646 aa12.93□□□□□ -0.34
SMG6-201ENST00000263073 CAPRIN2Q6IMN6 1127 aaKnown RBP12.93□□□□□ -0.34
SMG6-201ENST00000263073 NIM1KQ8IY84 436 aa12.93□□□□□ -0.34
SMG6-201ENST00000263073 SLC26A7Q8TE54 656 aa12.93□□□□□ -0.34
SMG6-201ENST00000263073 TMEM60Q9H2L4 133 aa12.93□□□□□ -0.34
SMG6-201ENST00000263073 MRPL47Q9HD33 250 aaKnown RBP12.93□□□□□ -0.34
SMG6-201ENST00000263073 CIAO1O76071 339 aa12.92□□□□□ -0.34
SMG6-201ENST00000263073 FCER1AP12319 257 aa12.92□□□□□ -0.34
SMG6-201ENST00000263073 RASGRF1Q13972 1273 aa12.92□□□□□ -0.34
SMG6-201ENST00000263073 MUM1L1Q5H9M0 696 aa12.92□□□□□ -0.34
SMG6-201ENST00000263073 TRIM11Q96F44 468 aa12.92□□□□□ -0.34
SMG6-201ENST00000263073 PDLIM2Q96JY6 352 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms