RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 EYA4O95677 639 aa30.62■■■□□ 2.49
SMARCD3-201ENST00000262188 CACNB1Q02641 598 aaPredicted RBP30.62■■■□□ 2.49
SMARCD3-201ENST00000262188 POSTNQ15063 836 aa30.62■■■□□ 2.49
SMARCD3-201ENST00000262188 SV2BQ7L1I2 683 aa30.62■■■□□ 2.49
SMARCD3-201ENST00000262188 AFAP1L1Q8TED9 768 aa30.62■■■□□ 2.49
SMARCD3-201ENST00000262188 RNPEPQ9H4A4 650 aa30.62■■■□□ 2.49
SMARCD3-201ENST00000262188 USP25Q9UHP3 1055 aa30.62■■■□□ 2.49
SMARCD3-201ENST00000262188 EMSYQ7Z589 1322 aa30.61■■■□□ 2.49
SMARCD3-201ENST00000262188 PPFIA4O75335 1185 aa30.61■■■□□ 2.49
SMARCD3-201ENST00000262188 LYPLA2O95372 231 aa30.61■■■□□ 2.49
SMARCD3-201ENST00000262188 MYL3P08590 195 aa30.61■■■□□ 2.49
SMARCD3-201ENST00000262188 DGKDQ16760 1214 aa30.61■■■□□ 2.49
SMARCD3-201ENST00000262188 SASS6Q6UVJ0 657 aa30.61■■■□□ 2.49
SMARCD3-201ENST00000262188 DYMQ7RTS9 669 aa30.61■■■□□ 2.49
SMARCD3-201ENST00000262188 RUSC1Q9BVN2 902 aa30.61■■■□□ 2.49
SMARCD3-201ENST00000262188 Q9Y3F1 56 aa30.61■■■□□ 2.49
SMARCD3-201ENST00000262188 R3HCC1Q9Y3T6 440 aaKnown RBP30.61■■■□□ 2.49
SMARCD3-201ENST00000262188 GJA9P57773 515 aa30.61■■■□□ 2.49
SMARCD3-201ENST00000262188 GPBP1Q86WP2 473 aa30.61■■■□□ 2.49
SMARCD3-201ENST00000262188 DNAH12Q6ZR08 3092 aa30.61■■■□□ 2.49
SMARCD3-201ENST00000262188 ADAMTS4O75173 837 aa30.6■■■□□ 2.49
SMARCD3-201ENST00000262188 OATP04181 439 aa30.6■■■□□ 2.49
SMARCD3-201ENST00000262188 HOXD8P13378 290 aaPredicted RBP30.6■■■□□ 2.49
SMARCD3-201ENST00000262188 MUTP22033 750 aa30.6■■■□□ 2.49
SMARCD3-201ENST00000262188 PLCB4Q15147 1175 aa30.6■■■□□ 2.49
SMARCD3-201ENST00000262188 ARSHQ5FYA8 562 aa30.6■■■□□ 2.49
SMARCD3-201ENST00000262188 XKR9Q5GH70 373 aa30.6■■■□□ 2.49
SMARCD3-201ENST00000262188 GNASQ5JWF2 1037 aa30.6■■■□□ 2.49
SMARCD3-201ENST00000262188 CUEDC2Q9H467 287 aa30.6■■■□□ 2.49
SMARCD3-201ENST00000262188 SMARCAD1Q9H4L7 1026 aa30.6■■■□□ 2.49
SMARCD3-201ENST00000262188 RARRES1P49788 294 aa30.59■■■□□ 2.49
SMARCD3-201ENST00000262188 ZSCAN23Q3MJ62 389 aa30.59■■■□□ 2.49
SMARCD3-201ENST00000262188 SYT2Q8N9I0 419 aaPredicted RBP30.59■■■□□ 2.49
SMARCD3-201ENST00000262188 XRN2Q9H0D6 950 aaKnown RBP eCLIP30.59■■■□□ 2.49
SMARCD3-201ENST00000262188 SYCE3A1L190 88 aa30.59■■■□□ 2.49
SMARCD3-201ENST00000262188 CPT1AP50416 773 aa30.59■■■□□ 2.49
SMARCD3-201ENST00000262188 MTERF2Q49AM1 385 aa30.59■■■□□ 2.49
SMARCD3-201ENST00000262188 LHX8Q68G74 356 aa30.59■■■□□ 2.49
SMARCD3-201ENST00000262188 ISM2Q6H9L7 571 aa30.59■■■□□ 2.49
SMARCD3-201ENST00000262188 UPF3AQ9H1J1 476 aaKnown RBP30.59■■■□□ 2.49
SMARCD3-201ENST00000262188 CYP11B2P19099 503 aa30.58■■■□□ 2.49
SMARCD3-201ENST00000262188 XKR3Q5GH77 459 aa30.58■■■□□ 2.49
SMARCD3-201ENST00000262188 MAEAQ7L5Y9 396 aa30.58■■■□□ 2.49
SMARCD3-201ENST00000262188 PLPPR4Q7Z2D5 763 aa30.58■■■□□ 2.49
SMARCD3-201ENST00000262188 TRAPPC12Q8WVT3 735 aa30.58■■■□□ 2.49
SMARCD3-201ENST00000262188 KAT2BQ92831 832 aa30.58■■■□□ 2.49
SMARCD3-201ENST00000262188 SYAP1Q96A49 352 aaPredicted RBP30.58■■■□□ 2.49
SMARCD3-201ENST00000262188 ZBTB10Q96DT7 871 aa30.58■■■□□ 2.49
SMARCD3-201ENST00000262188 ARHGEF35A5YM69 484 aa30.57■■■□□ 2.48
SMARCD3-201ENST00000262188 H3BRB1 525 aa30.57■■■□□ 2.48
SMARCD3-201ENST00000262188 CEP170P1Q96L14 293 aa30.57■■■□□ 2.48
SMARCD3-201ENST00000262188 TRIM9Q9C026 710 aa30.57■■■□□ 2.48
SMARCD3-201ENST00000262188 TUT1Q9H6E5 874 aaKnown RBP30.57■■■□□ 2.48
SMARCD3-201ENST00000262188 PCDHA5Q9Y5H7 936 aa30.57■■■□□ 2.48
SMARCD3-201ENST00000262188 BIN1O00499 593 aa30.57■■■□□ 2.48
SMARCD3-201ENST00000262188 DPYDQ12882 1025 aa30.57■■■□□ 2.48
SMARCD3-201ENST00000262188 RINT1Q6NUQ1 792 aa30.57■■■□□ 2.48
SMARCD3-201ENST00000262188 KANK3Q6NY19 840 aa30.57■■■□□ 2.48
SMARCD3-201ENST00000262188 FBXO46Q6PJ61 603 aaPredicted RBP30.57■■■□□ 2.48
SMARCD3-201ENST00000262188 DDX12PQ92771 950 aa30.57■■■□□ 2.48
SMARCD3-201ENST00000262188 TRPC6Q9Y210 931 aa30.57■■■□□ 2.48
SMARCD3-201ENST00000262188 USO1O60763 962 aaKnown RBP30.56■■■□□ 2.48
SMARCD3-201ENST00000262188 ERAP1Q9NZ08 941 aa30.56■■■□□ 2.48
SMARCD3-201ENST00000262188 GTPBP6O43824 516 aaPredicted RBP30.55■■■□□ 2.48
SMARCD3-201ENST00000262188 CCL5P13501 91 aa30.55■■■□□ 2.48
SMARCD3-201ENST00000262188 SOX10P56693 466 aa30.55■■■□□ 2.48
SMARCD3-201ENST00000262188 PADI6Q6TGC4 694 aa30.55■■■□□ 2.48
SMARCD3-201ENST00000262188 CXCL17Q6UXB2 119 aa30.55■■■□□ 2.48
SMARCD3-201ENST00000262188 CCDC43Q96MW1 224 aaKnown RBP30.55■■■□□ 2.48
SMARCD3-201ENST00000262188 DBR1Q9UK59 544 aaKnown RBP30.55■■■□□ 2.48
SMARCD3-201ENST00000262188 DKC1O60832 514 aaKnown RBP eCLIP30.55■■■□□ 2.48
SMARCD3-201ENST00000262188 ATP8B4Q8TF62 1192 aa30.55■■■□□ 2.48
SMARCD3-201ENST00000262188 MAGEF1Q9HAY2 307 aa30.55■■■□□ 2.48
SMARCD3-201ENST00000262188 SPC25Q9HBM1 224 aa30.55■■■□□ 2.48
SMARCD3-201ENST00000262188 CYP26B1Q9NR63 512 aa30.55■■■□□ 2.48
SMARCD3-201ENST00000262188 ANKEF1Q9NU02 776 aa30.55■■■□□ 2.48
SMARCD3-201ENST00000262188 RSPH10B2B2RC85 870 aa30.54■■■□□ 2.48
SMARCD3-201ENST00000262188 RSPH10BP0C881 870 aa30.54■■■□□ 2.48
SMARCD3-201ENST00000262188 PURAQ00577 322 aaKnown RBP30.54■■■□□ 2.48
SMARCD3-201ENST00000262188 C1orf186Q6ZWK4 172 aa30.54■■■□□ 2.48
SMARCD3-201ENST00000262188 DEFB118Q96PH6 123 aa30.54■■■□□ 2.48
SMARCD3-201ENST00000262188 RNF208Q9H0X6 261 aa30.54■■■□□ 2.48
SMARCD3-201ENST00000262188 KIAA1468Q9P260 1216 aa30.54■■■□□ 2.48
SMARCD3-201ENST00000262188 ZBTB42B2RXF5 422 aa30.54■■■□□ 2.48
SMARCD3-201ENST00000262188 IGBP1P78318 339 aa30.54■■■□□ 2.48
SMARCD3-201ENST00000262188 ASIC1P78348 528 aa30.54■■■□□ 2.48
SMARCD3-201ENST00000262188 KCNA10Q16322 511 aa30.54■■■□□ 2.48
SMARCD3-201ENST00000262188 BRDTQ58F21 947 aaPredicted RBP30.54■■■□□ 2.48
SMARCD3-201ENST00000262188 OTUD6AQ7L8S5 288 aa30.54■■■□□ 2.48
SMARCD3-201ENST00000262188 KLHDC9Q8NEP7 349 aa30.54■■■□□ 2.48
SMARCD3-201ENST00000262188 DNAJC19Q96DA6 116 aa30.54■■■□□ 2.48
SMARCD3-201ENST00000262188 C7orf25Q9BPX7 421 aa30.54■■■□□ 2.48
SMARCD3-201ENST00000262188 ARID2Q68CP9 1835 aa30.53■■■□□ 2.48
SMARCD3-201ENST00000262188 F2P00734 622 aa30.53■■■□□ 2.48
SMARCD3-201ENST00000262188 RBM43Q6ZSC3 357 aaKnown RBP30.53■■■□□ 2.48
SMARCD3-201ENST00000262188 HPS3Q969F9 1004 aa30.53■■■□□ 2.48
SMARCD3-201ENST00000262188 REEP2Q9BRK0 252 aa30.53■■■□□ 2.48
SMARCD3-201ENST00000262188 NRBP2Q9NSY0 501 aa30.53■■■□□ 2.48
SMARCD3-201ENST00000262188 SFI1A8K8P3 1242 aa30.52■■■□□ 2.48
SMARCD3-201ENST00000262188 KRT18P05783 430 aaKnown RBP30.52■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms