RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 FAM228AQ86W67 206 aa14.18□□□□□ -0.14
SNX1-201ENST00000261889 DNAJC19Q96DA6 116 aa14.18□□□□□ -0.14
SNX1-201ENST00000261889 POP1Q99575 1024 aaKnown RBP14.18□□□□□ -0.14
SNX1-201ENST00000261889 PKD2L1Q9P0L9 805 aa14.18□□□□□ -0.14
SNX1-201ENST00000261889 GNA11P29992 359 aa14.18□□□□□ -0.14
SNX1-201ENST00000261889 TM4SF1P30408 202 aa14.18□□□□□ -0.14
SNX1-201ENST00000261889 VPS41P49754 854 aa14.18□□□□□ -0.14
SNX1-201ENST00000261889 ADCY7P51828 1080 aa14.18□□□□□ -0.14
SNX1-201ENST00000261889 ZC2HC1CQ53FD0 456 aaPredicted RBP14.18□□□□□ -0.14
SNX1-201ENST00000261889 PARP10Q53GL7 1025 aa14.18□□□□□ -0.14
SNX1-201ENST00000261889 GUF1Q8N442 669 aaKnown RBP14.18□□□□□ -0.14
SNX1-201ENST00000261889 GIMAP7Q8NHV1 300 aa14.18□□□□□ -0.14
SNX1-201ENST00000261889 SEC16BQ96JE7 1060 aa14.18□□□□□ -0.14
SNX1-201ENST00000261889 EMILIN3Q9NT22 766 aa14.18□□□□□ -0.14
SNX1-201ENST00000261889 HDAC9Q9UKV0 1011 aa14.18□□□□□ -0.14
SNX1-201ENST00000261889 RBAK-RBAKDNI3L0D1 243 aa14.17□□□□□ -0.14
SNX1-201ENST00000261889 GNPATO15228 680 aa14.17□□□□□ -0.14
SNX1-201ENST00000261889 MED24O75448 989 aa14.17□□□□□ -0.14
SNX1-201ENST00000261889 CREB1P16220 341 aa14.17□□□□□ -0.14
SNX1-201ENST00000261889 HOXA13P31271 388 aaPredicted RBP14.17□□□□□ -0.14
SNX1-201ENST00000261889 EN1Q05925 392 aaPredicted RBP14.17□□□□□ -0.14
SNX1-201ENST00000261889 TCP10Q12799 353 aa14.17□□□□□ -0.14
SNX1-201ENST00000261889 PRR16Q569H4 304 aa14.17□□□□□ -0.14
SNX1-201ENST00000261889 SFR1Q86XK3 245 aa14.17□□□□□ -0.14
SNX1-201ENST00000261889 BTBD6Q96KE9 485 aa14.17□□□□□ -0.14
SNX1-201ENST00000261889 MTA3Q9BTC8 594 aa14.17□□□□□ -0.14
SNX1-201ENST00000261889 TMBIM4Q9HC24 238 aa14.17□□□□□ -0.14
SNX1-201ENST00000261889 DBR1Q9UK59 544 aaKnown RBP14.17□□□□□ -0.14
SNX1-201ENST00000261889 PPP1R9AQ9ULJ8 1098 aa14.17□□□□□ -0.14
SNX1-201ENST00000261889 PCDHAC2Q9Y5I4 1007 aa14.17□□□□□ -0.14
SNX1-201ENST00000261889 TIAM2Q8IVF5 1701 aa14.17□□□□□ -0.14
SNX1-201ENST00000261889 PLA2G4BP0C869 781 aa14.17□□□□□ -0.14
SNX1-201ENST00000261889 KCNJ1P48048 391 aa14.17□□□□□ -0.14
SNX1-201ENST00000261889 TNNC1P63316 161 aa14.17□□□□□ -0.14
SNX1-201ENST00000261889 SUGP1Q8IWZ8 645 aaKnown RBP14.17□□□□□ -0.14
SNX1-201ENST00000261889 PRCCQ92733 491 aaPredicted RBP14.17□□□□□ -0.14
SNX1-201ENST00000261889 KCNQ5Q9NR82 932 aa14.17□□□□□ -0.14
SNX1-201ENST00000261889 RGL1Q9NZL6 768 aa14.17□□□□□ -0.14
SNX1-201ENST00000261889 CEP72Q9P209 647 aa14.17□□□□□ -0.14
SNX1-201ENST00000261889 CENPFP49454 3210 aa14.17□□□□□ -0.14
SNX1-201ENST00000261889 GMNCA6NCL1 334 aa14.17□□□□□ -0.14
SNX1-201ENST00000261889 A8MUI8 341 aa14.17□□□□□ -0.14
SNX1-201ENST00000261889 VIMP08670 466 aaKnown RBP14.17□□□□□ -0.14
SNX1-201ENST00000261889 IKQ13123 557 aaPredicted RBP14.17□□□□□ -0.14
SNX1-201ENST00000261889 TRIP13Q15645 432 aaPredicted RBP14.17□□□□□ -0.14
SNX1-201ENST00000261889 PWWP2AQ96N64 755 aa14.17□□□□□ -0.14
SNX1-201ENST00000261889 MTMR9Q96QG7 549 aa14.17□□□□□ -0.14
SNX1-201ENST00000261889 ELAC2Q9BQ52 826 aaKnown RBP14.17□□□□□ -0.14
SNX1-201ENST00000261889 TPX2Q9ULW0 747 aaKnown RBP14.17□□□□□ -0.14
SNX1-201ENST00000261889 AKAP3O75969 853 aa14.16□□□□□ -0.14
SNX1-201ENST00000261889 FAM107AO95990 144 aa14.16□□□□□ -0.14
SNX1-201ENST00000261889 GYS1P13807 737 aa14.16□□□□□ -0.14
SNX1-201ENST00000261889 UCHL3P15374 230 aa14.16□□□□□ -0.14
SNX1-201ENST00000261889 MRRFQ96E11 262 aaKnown RBP14.16□□□□□ -0.14
SNX1-201ENST00000261889 SETDB2Q96T68 719 aa14.16□□□□□ -0.14
SNX1-201ENST00000261889 TISP43B9A030 160 aa14.16□□□□□ -0.14
SNX1-201ENST00000261889 MYCNP04198 464 aaPredicted RBP14.16□□□□□ -0.14
SNX1-201ENST00000261889 HNRNPH3P31942 346 aaKnown RBP14.16□□□□□ -0.14
SNX1-201ENST00000261889 CYB5D1Q6P9G0 228 aa14.16□□□□□ -0.14
SNX1-201ENST00000261889 EPS8L3Q8TE67 593 aaKnown RBP14.16□□□□□ -0.14
SNX1-201ENST00000261889 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.16□□□□□ -0.14
SNX1-201ENST00000261889 TRIM33Q9UPN9 1127 aa14.16□□□□□ -0.14
SNX1-201ENST00000261889 PAX7P23759 505 aa14.16□□□□□ -0.14
SNX1-201ENST00000261889 CYP2J2P51589 502 aa14.16□□□□□ -0.14
SNX1-201ENST00000261889 BYSLQ13895 437 aaKnown RBP14.16□□□□□ -0.14
SNX1-201ENST00000261889 DAB2IPQ5VWQ8 1189 aa14.16□□□□□ -0.14
SNX1-201ENST00000261889 C18orf8Q96DM3 657 aa14.16□□□□□ -0.14
SNX1-201ENST00000261889 ARHGEF26Q96DR7 871 aa14.16□□□□□ -0.14
SNX1-201ENST00000261889 AZI2Q9H6S1 392 aa14.16□□□□□ -0.14
SNX1-201ENST00000261889 NAGPAQ9UK23 515 aa14.16□□□□□ -0.14
SNX1-201ENST00000261889 STK38LQ9Y2H1 464 aa14.16□□□□□ -0.14
SNX1-201ENST00000261889 GCNT3O95395 438 aa14.15□□□□□ -0.14
SNX1-201ENST00000261889 C2CD6Q53TS8 623 aa14.15□□□□□ -0.14
SNX1-201ENST00000261889 ANKRD42Q8N9B4 389 aa14.15□□□□□ -0.14
SNX1-201ENST00000261889 VCPKMTQ9H867 229 aa14.15□□□□□ -0.14
SNX1-201ENST00000261889 GCNT4Q9P109 453 aa14.15□□□□□ -0.14
SNX1-201ENST00000261889 ODF2LQ9ULJ1 636 aa14.15□□□□□ -0.14
SNX1-201ENST00000261889 SUFUQ9UMX1 484 aa14.15□□□□□ -0.14
SNX1-201ENST00000261889 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.15□□□□□ -0.14
SNX1-201ENST00000261889 PLCG2P16885 1265 aa14.15□□□□□ -0.14
SNX1-201ENST00000261889 GNAQP50148 359 aa14.15□□□□□ -0.14
SNX1-201ENST00000261889 FIGNQ5HY92 759 aa14.15□□□□□ -0.14
SNX1-201ENST00000261889 SLC10A5Q5PT55 438 aa14.15□□□□□ -0.14
SNX1-201ENST00000261889 MFSD14BQ5SR56 506 aa14.15□□□□□ -0.14
SNX1-201ENST00000261889 COL23A1Q86Y22 540 aaPredicted RBP14.15□□□□□ -0.14
SNX1-201ENST00000261889 ADGRF4Q8IZF3 695 aa14.15□□□□□ -0.14
SNX1-201ENST00000261889 AK8Q96MA6 479 aa14.15□□□□□ -0.14
SNX1-201ENST00000261889 TCRBV7S2A1N4TA0A589 114 aa14.14□□□□□ -0.15
SNX1-201ENST00000261889 EPB41P11171 864 aaKnown RBP14.14□□□□□ -0.15
SNX1-201ENST00000261889 CHN1P15882 459 aa14.14□□□□□ -0.15
SNX1-201ENST00000261889 NMT1P30419 496 aaKnown RBP14.14□□□□□ -0.15
SNX1-201ENST00000261889 CDK17Q00537 523 aa14.14□□□□□ -0.15
SNX1-201ENST00000261889 MTM1Q13496 603 aa14.14□□□□□ -0.15
SNX1-201ENST00000261889 NAA25Q14CX7 972 aa14.14□□□□□ -0.15
SNX1-201ENST00000261889 SLC15A2Q16348 729 aa14.14□□□□□ -0.15
SNX1-201ENST00000261889 EXOC3L4Q17RC7 722 aa14.14□□□□□ -0.15
SNX1-201ENST00000261889 SPICE1Q8N0Z3 855 aa14.14□□□□□ -0.15
SNX1-201ENST00000261889 GDAP1Q8TB36 358 aa14.14□□□□□ -0.15
SNX1-201ENST00000261889 HVCN1Q96D96 273 aa14.14□□□□□ -0.15
SNX1-201ENST00000261889 PRMT1Q99873 361 aaKnown RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms