RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 ATRIPQ8WXE1 791 aa15.08■□□□□ 0
CDH1-201ENST00000261769 ZKSCAN4Q969J2 545 aaPredicted RBP15.08■□□□□ 0
CDH1-201ENST00000261769 NCAPGQ9BPX3 1015 aa15.08■□□□□ 0
CDH1-201ENST00000261769 MROH8Q9H579 483 aa15.08■□□□□ 0
CDH1-201ENST00000261769 BACE1P56817 501 aa15.07■□□□□ 0
CDH1-201ENST00000261769 PRPSAP1Q14558 356 aa15.07■□□□□ 0
CDH1-201ENST00000261769 CYFIP1Q7L576 1253 aa15.07■□□□□ 0
CDH1-201ENST00000261769 SMC6Q96SB8 1091 aa15.07■□□□□ 0
CDH1-201ENST00000261769 SH3BP5O60239 455 aa15.07■□□□□ 0
CDH1-201ENST00000261769 GPC3P51654 580 aa15.07■□□□□ 0
CDH1-201ENST00000261769 ERO1AQ96HE7 468 aa15.07■□□□□ 0
CDH1-201ENST00000261769 NDST4Q9H3R1 872 aa15.07■□□□□ 0
CDH1-201ENST00000261769 SCAF8Q9UPN6 1271 aaKnown RBP15.07■□□□□ 0
CDH1-201ENST00000261769 FAM205AQ6ZU69 1335 aa15.07■□□□□ 0
CDH1-201ENST00000261769 POTEFA5A3E0 1075 aa15.07■□□□□ 0
CDH1-201ENST00000261769 EIF3CLB5ME19 914 aaKnown RBP15.07■□□□□ 0
CDH1-201ENST00000261769 EYA4O95677 639 aa15.07■□□□□ 0
CDH1-201ENST00000261769 POTEIP0CG38 1075 aa15.07■□□□□ 0
CDH1-201ENST00000261769 MXD4Q14582 209 aaPredicted RBP15.07■□□□□ 0
CDH1-201ENST00000261769 POTEGQ6S5H5 508 aa15.07■□□□□ 0
CDH1-201ENST00000261769 POTEEQ6S8J3 1075 aa15.07■□□□□ 0
CDH1-201ENST00000261769 SMAP1Q8IYB5 467 aaPredicted RBP15.07■□□□□ 0
CDH1-201ENST00000261769 CEP63Q96MT8 703 aa15.07■□□□□ 0
CDH1-201ENST00000261769 EIF3CQ99613 913 aaKnown RBP15.07■□□□□ 0
CDH1-201ENST00000261769 EPB41L4AQ9HCS5 686 aaPredicted RBP15.07■□□□□ 0
CDH1-201ENST00000261769 POLIQ9UNA4 740 aa15.07■□□□□ 0
CDH1-201ENST00000261769 GOLGA8CPA6NN73 597 aa15.06■□□□□ 0
CDH1-201ENST00000261769 SPDYE16A6NNV3 312 aaPredicted RBP15.06■□□□□ 0
CDH1-201ENST00000261769 MAPK4P31152 587 aa15.06■□□□□ 0
CDH1-201ENST00000261769 LMNB2Q03252 620 aa15.06■□□□□ 0
CDH1-201ENST00000261769 MAP7D1Q3KQU3 841 aa15.06■□□□□ 0
CDH1-201ENST00000261769 SPDYE2Q495Y8 402 aa15.06■□□□□ 0
CDH1-201ENST00000261769 FHDC1Q9C0D6 1143 aaPredicted RBP15.06■□□□□ 0
CDH1-201ENST00000261769 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.06■□□□□ 0
CDH1-201ENST00000261769 V9GYY5 206 aaPredicted RBP15.06■□□□□ 0
CDH1-201ENST00000261769 KIAA0391O15091 583 aaKnown RBP15.06■□□□□ 0
CDH1-201ENST00000261769 DDR1Q08345 913 aa15.06■□□□□ 0
CDH1-201ENST00000261769 LAMC2Q13753 1193 aa15.06■□□□□ 0
CDH1-201ENST00000261769 ARL13BQ3SXY8 428 aa15.06■□□□□ 0
CDH1-201ENST00000261769 GNASQ5JWF2 1037 aa15.06■□□□□ 0
CDH1-201ENST00000261769 STOX1Q6ZVD7 989 aa15.06■□□□□ 0
CDH1-201ENST00000261769 PGBD4Q96DM1 585 aa15.06■□□□□ 0
CDH1-201ENST00000261769 MANSC4A6NHS7 340 aaPredicted RBP15.06■□□□□ 0
CDH1-201ENST00000261769 SLC26A4O43511 780 aa15.06■□□□□ 0
CDH1-201ENST00000261769 TRAPPC3O43617 180 aa15.06■□□□□ 0
CDH1-201ENST00000261769 FGFR2P21802 821 aa15.06■□□□□ 0
CDH1-201ENST00000261769 AP3M2P53677 418 aa15.06■□□□□ 0
CDH1-201ENST00000261769 SCARA5Q6ZMJ2 495 aa15.06■□□□□ 0
CDH1-201ENST00000261769 PLEKHH3Q7Z736 793 aa15.06■□□□□ 0
CDH1-201ENST00000261769 ANKS4BQ8N8V4 417 aa15.06■□□□□ 0
CDH1-201ENST00000261769 FBF1Q8TES7 1133 aa15.06■□□□□ 0
CDH1-201ENST00000261769 RRAGCQ9HB90 399 aa15.06■□□□□ 0
CDH1-201ENST00000261769 H7C0C1 242 aa15.06■□□□□ 0
CDH1-201ENST00000261769 STXBP3O00186 592 aa15.06■□□□□ 0
CDH1-201ENST00000261769 NR3C1P04150 777 aa15.06■□□□□ 0
CDH1-201ENST00000261769 ATP5OP48047 213 aa15.06■□□□□ 0
CDH1-201ENST00000261769 CPT1AP50416 773 aa15.06■□□□□ 0
CDH1-201ENST00000261769 USP50Q70EL3 339 aaPredicted RBP15.06■□□□□ 0
CDH1-201ENST00000261769 SAMD3Q8N6K7 520 aa15.06■□□□□ 0
CDH1-201ENST00000261769 ATP2A3Q93084 1043 aa15.06■□□□□ 0
CDH1-201ENST00000261769 TYW1Q9NV66 732 aaKnown RBP15.06■□□□□ 0
CDH1-201ENST00000261769 IPO11Q9UI26 975 aaKnown RBP15.06■□□□□ 0
CDH1-201ENST00000261769 GDAQ9Y2T3 454 aa15.06■□□□□ 0
CDH1-201ENST00000261769 ASAP2O43150 1006 aa15.05■□□□□ 0
CDH1-201ENST00000261769 NFKBIAP25963 317 aa15.05■□□□□ 0
CDH1-201ENST00000261769 CLCN1P35523 988 aa15.05■□□□□ 0
CDH1-201ENST00000261769 GOLGA8FQ08AF8 430 aa15.05■□□□□ 0
CDH1-201ENST00000261769 GOLGA8DPQ0D2H9 430 aa15.05■□□□□ 0
CDH1-201ENST00000261769 MESDQ14696 234 aa15.05■□□□□ 0
CDH1-201ENST00000261769 ZNF699Q32M78 642 aa15.05■□□□□ 0
CDH1-201ENST00000261769 HDXQ7Z353 690 aa15.05■□□□□ 0
CDH1-201ENST00000261769 BBOF1Q8ND07 529 aa15.05■□□□□ 0
CDH1-201ENST00000261769 P3H4Q92791 437 aa15.05■□□□□ 0
CDH1-201ENST00000261769 CCDC68Q9H2F9 335 aa15.05■□□□□ 0
CDH1-201ENST00000261769 KRIT1O00522 736 aa15.05■□□□□ 0
CDH1-201ENST00000261769 CXCL11O14625 94 aa15.05■□□□□ 0
CDH1-201ENST00000261769 IRX5P78411 483 aaPredicted RBP15.05■□□□□ 0
CDH1-201ENST00000261769 NFIAQ12857 509 aa15.05■□□□□ 0
CDH1-201ENST00000261769 GPT2Q8TD30 523 aa15.05■□□□□ 0
CDH1-201ENST00000261769 ZNF560Q96MR9 790 aa15.05■□□□□ 0
CDH1-201ENST00000261769 RIT2Q99578 217 aa15.05■□□□□ 0
CDH1-201ENST00000261769 CASP14P31944 242 aa15.05■□□□□ -0
CDH1-201ENST00000261769 YWHABP31946 246 aaKnown RBP15.05■□□□□ -0
CDH1-201ENST00000261769 ZBED6P86452 979 aa15.05■□□□□ -0
CDH1-201ENST00000261769 NBPF9Q3BBW0 867 aa15.05■□□□□ -0
CDH1-201ENST00000261769 C10orf76Q5T2E6 689 aa15.05■□□□□ -0
CDH1-201ENST00000261769 MAP1SQ66K74 1059 aaPredicted RBP15.05■□□□□ -0
CDH1-201ENST00000261769 C1orf228Q6PIY5 440 aa15.05■□□□□ -0
CDH1-201ENST00000261769 ANKRD13CQ8N6S4 541 aa15.05■□□□□ -0
CDH1-201ENST00000261769 RNF149Q8NC42 400 aa15.05■□□□□ -0
CDH1-201ENST00000261769 FAM213AQ9BRX8 229 aa15.05■□□□□ -0
CDH1-201ENST00000261769 ZNF148Q9UQR1 794 aa15.05■□□□□ -0
CDH1-201ENST00000261769 RRN3P2A6NIE6 340 aa15.05■□□□□ -0
CDH1-201ENST00000261769 ATP2C1P98194 919 aaPredicted RBP15.05■□□□□ -0
CDH1-201ENST00000261769 MTMR3Q13615 1198 aa15.05■□□□□ -0
CDH1-201ENST00000261769 KNOP1Q1ED39 458 aaKnown RBP15.05■□□□□ -0
CDH1-201ENST00000261769 RUFY4Q6ZNE9 571 aa15.05■□□□□ -0
CDH1-201ENST00000261769 KRT222Q8N1A0 295 aa15.05■□□□□ -0
CDH1-201ENST00000261769 SMC1BQ8NDV3 1235 aa15.05■□□□□ -0
CDH1-201ENST00000261769 MAP3K20Q9NYL2 800 aaKnown RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms