RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 SMCR8Q8TEV9 937 aaPredicted RBP30.53■■■□□ 2.48
CCM2-201ENST00000258781 WDR81Q562E7 1941 aa30.53■■■□□ 2.48
CCM2-201ENST00000258781 NKRFO15226 690 aaKnown RBP eCLIP30.53■■■□□ 2.48
CCM2-201ENST00000258781 CCDC40Q4G0X9 1142 aa30.53■■■□□ 2.48
CCM2-201ENST00000258781 CYP26C1Q6V0L0 522 aa30.53■■■□□ 2.48
CCM2-201ENST00000258781 OR8K1Q8NGG5 319 aa30.53■■■□□ 2.48
CCM2-201ENST00000258781 SAMM50Q9Y512 469 aa30.53■■■□□ 2.48
CCM2-201ENST00000258781 A0A1W2PQJ5 194 aa30.52■■■□□ 2.48
CCM2-201ENST00000258781 WDR64B1ANS9 1081 aa30.52■■■□□ 2.48
CCM2-201ENST00000258781 UBE4BO95155 1302 aa30.52■■■□□ 2.48
CCM2-201ENST00000258781 SLC10A3P09131 477 aa30.52■■■□□ 2.48
CCM2-201ENST00000258781 ERCC3P19447 782 aa30.52■■■□□ 2.48
CCM2-201ENST00000258781 RAD9BQ6WBX8 426 aa30.52■■■□□ 2.48
CCM2-201ENST00000258781 CETN3O15182 167 aa30.51■■■□□ 2.47
CCM2-201ENST00000258781 CALUO43852 315 aaPredicted RBP30.51■■■□□ 2.47
CCM2-201ENST00000258781 ATP9AO75110 1047 aa30.51■■■□□ 2.47
CCM2-201ENST00000258781 TRIM21P19474 475 aaKnown RBP30.51■■■□□ 2.47
CCM2-201ENST00000258781 HOXD13P35453 343 aa30.51■■■□□ 2.47
CCM2-201ENST00000258781 ERVK-9P63128 1117 aa30.51■■■□□ 2.47
CCM2-201ENST00000258781 ERVK-24P63145 666 aa30.51■■■□□ 2.47
CCM2-201ENST00000258781 MYCT1Q8N699 235 aa30.51■■■□□ 2.47
CCM2-201ENST00000258781 KIF18AQ8NI77 898 aa30.51■■■□□ 2.47
CCM2-201ENST00000258781 SENP7Q9BQF6 1050 aa30.51■■■□□ 2.47
CCM2-201ENST00000258781 TYW1Q9NV66 732 aaKnown RBP30.51■■■□□ 2.47
CCM2-201ENST00000258781 FBXO40Q9UH90 709 aa30.51■■■□□ 2.47
CCM2-201ENST00000258781 GCNT3O95395 438 aa30.5■■■□□ 2.47
CCM2-201ENST00000258781 CCDC175P0C221 793 aa30.5■■■□□ 2.47
CCM2-201ENST00000258781 ADAM9Q13443 819 aa30.5■■■□□ 2.47
CCM2-201ENST00000258781 ZNF746Q6NUN9 644 aaPredicted RBP30.5■■■□□ 2.47
CCM2-201ENST00000258781 CDHR1Q96JP9 859 aa30.5■■■□□ 2.47
CCM2-201ENST00000258781 ABT1Q9ULW3 272 aaKnown RBP30.5■■■□□ 2.47
CCM2-201ENST00000258781 SIK3Q9Y2K2 1263 aa30.5■■■□□ 2.47
CCM2-201ENST00000258781 RASSF10A6NK89 507 aa30.5■■■□□ 2.47
CCM2-201ENST00000258781 FAM155AB1AL88 458 aaPredicted RBP30.5■■■□□ 2.47
CCM2-201ENST00000258781 PRPF6O94906 941 aaKnown RBP30.5■■■□□ 2.47
CCM2-201ENST00000258781 MTF1Q14872 753 aa30.5■■■□□ 2.47
CCM2-201ENST00000258781 C4orf19Q8IY42 314 aa30.5■■■□□ 2.47
CCM2-201ENST00000258781 PFASO15067 1338 aa30.49■■■□□ 2.47
CCM2-201ENST00000258781 GTF2F1P35269 517 aaKnown RBP eCLIP30.49■■■□□ 2.471e-8■■■■■ 31.2
CCM2-201ENST00000258781 PADI6Q6TGC4 694 aa30.49■■■□□ 2.47
CCM2-201ENST00000258781 STXBP4Q6ZWJ1 553 aa30.49■■■□□ 2.47
CCM2-201ENST00000258781 TRIM59Q8IWR1 403 aa30.49■■■□□ 2.47
CCM2-201ENST00000258781 ANKRD35Q8N283 1001 aa30.49■■■□□ 2.47
CCM2-201ENST00000258781 DNERQ8NFT8 737 aa30.49■■■□□ 2.47
CCM2-201ENST00000258781 ZNF592Q92610 1267 aa30.49■■■□□ 2.47
CCM2-201ENST00000258781 PCMTD1Q96MG8 357 aaPredicted RBP30.49■■■□□ 2.47
CCM2-201ENST00000258781 IWS1Q96ST2 819 aa30.49■■■□□ 2.47
CCM2-201ENST00000258781 TMEM88BA6NKF7 163 aa30.48■■■□□ 2.47
CCM2-201ENST00000258781 IGF2BP3O00425 579 aaKnown RBP eCLIP30.48■■■□□ 2.47
CCM2-201ENST00000258781 RIOK3O14730 519 aaKnown RBP30.48■■■□□ 2.47
CCM2-201ENST00000258781 CCNE2O96020 404 aa30.48■■■□□ 2.47
CCM2-201ENST00000258781 ZBED6P86452 979 aa30.48■■■□□ 2.47
CCM2-201ENST00000258781 TSR1Q2NL82 804 aaKnown RBP30.48■■■□□ 2.47
CCM2-201ENST00000258781 ANKRD13CQ8N6S4 541 aa30.48■■■□□ 2.47
CCM2-201ENST00000258781 ADGRG1Q9Y653 693 aa30.48■■■□□ 2.47
CCM2-201ENST00000258781 PCNTO95613 3336 aa30.48■■■□□ 2.47
CCM2-201ENST00000258781 NFASCO94856 1347 aa30.48■■■□□ 2.47
CCM2-201ENST00000258781 ZNFX1Q9P2E3 1918 aaKnown RBP30.48■■■□□ 2.47
CCM2-201ENST00000258781 SLC25A27O95847 323 aa30.48■■■□□ 2.47
CCM2-201ENST00000258781 NR2F2P24468 414 aa30.48■■■□□ 2.47
CCM2-201ENST00000258781 PSMC5P62195 406 aa30.48■■■□□ 2.47
CCM2-201ENST00000258781 ETF1P62495 437 aaKnown RBP30.48■■■□□ 2.47
CCM2-201ENST00000258781 GTF3C2Q8WUA4 911 aaPredicted RBP30.48■■■□□ 2.47
CCM2-201ENST00000258781 FAM184BQ9ULE4 1060 aa30.48■■■□□ 2.47
CCM2-201ENST00000258781 ASTN1O14525 1302 aa30.47■■■□□ 2.47
CCM2-201ENST00000258781 SFI1A8K8P3 1242 aa30.47■■■□□ 2.47
CCM2-201ENST00000258781 KLK7P49862 253 aa30.47■■■□□ 2.47
CCM2-201ENST00000258781 FIZ1Q96SL8 496 aa30.47■■■□□ 2.47
CCM2-201ENST00000258781 DESI2Q9BSY9 194 aa30.47■■■□□ 2.47
CCM2-201ENST00000258781 PORCNQ9H237 461 aa30.47■■■□□ 2.47
CCM2-201ENST00000258781 BCAS3Q9H6U6 928 aa30.47■■■□□ 2.47
CCM2-201ENST00000258781 MANSC4A6NHS7 340 aaPredicted RBP30.46■■■□□ 2.47
CCM2-201ENST00000258781 KCNA2P16389 499 aa30.46■■■□□ 2.47
CCM2-201ENST00000258781 RPL13P26373 211 aaKnown RBP30.46■■■□□ 2.47
CCM2-201ENST00000258781 RARRES1P49788 294 aa30.46■■■□□ 2.47
CCM2-201ENST00000258781 MAPK7Q13164 816 aa30.46■■■□□ 2.47
CCM2-201ENST00000258781 NFIL3Q16649 462 aa30.46■■■□□ 2.47
CCM2-201ENST00000258781 GNPTABQ3T906 1256 aa30.46■■■□□ 2.47
CCM2-201ENST00000258781 PARK7Q99497 189 aaKnown RBP30.46■■■□□ 2.47
CCM2-201ENST00000258781 TIPINQ9BVW5 301 aa30.46■■■□□ 2.47
CCM2-201ENST00000258781 HIP1RO75146 1068 aa30.46■■■□□ 2.47
CCM2-201ENST00000258781 RGS20O76081 388 aa30.46■■■□□ 2.47
CCM2-201ENST00000258781 CNTN2Q02246 1040 aa30.46■■■□□ 2.47
CCM2-201ENST00000258781 MEA1Q16626 185 aa30.46■■■□□ 2.47
CCM2-201ENST00000258781 FAM178BQ8IXR5 827 aa30.46■■■□□ 2.47
CCM2-201ENST00000258781 ZNF784Q8NCA9 323 aaPredicted RBP30.46■■■□□ 2.47
CCM2-201ENST00000258781 ZNF397Q8NF99 534 aaPredicted RBP30.46■■■□□ 2.47
CCM2-201ENST00000258781 POLD4Q9HCU8 107 aa30.46■■■□□ 2.47
CCM2-201ENST00000258781 NMT1P30419 496 aaKnown RBP30.45■■■□□ 2.47
CCM2-201ENST00000258781 YWHABP31946 246 aaKnown RBP30.45■■■□□ 2.47
CCM2-201ENST00000258781 TRIM65Q6PJ69 517 aa30.45■■■□□ 2.47
CCM2-201ENST00000258781 ZNF720Q7Z2F6 126 aa30.45■■■□□ 2.47
CCM2-201ENST00000258781 FRMD5Q7Z6J6 570 aa30.45■■■□□ 2.47
CCM2-201ENST00000258781 SMAP1Q8IYB5 467 aaPredicted RBP30.45■■■□□ 2.47
CCM2-201ENST00000258781 ANKEF1Q9NU02 776 aa30.45■■■□□ 2.47
CCM2-201ENST00000258781 UTP18Q9Y5J1 556 aaKnown RBP eCLIP30.45■■■□□ 2.47
CCM2-201ENST00000258781 PHLPP2Q6ZVD8 1323 aa30.45■■■□□ 2.46
CCM2-201ENST00000258781 UGCGQ16739 394 aa30.44■■■□□ 2.46
CCM2-201ENST00000258781 ODR4Q5SWX8 454 aa30.44■■■□□ 2.46
CCM2-201ENST00000258781 DAW1Q8N136 415 aa30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms