RNA–Protein interactions for RNA: ENST00000254810.8

H3F3B-201, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3B, Length 2,705 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-201ENST00000254810 EXOC3L4Q17RC7 722 aa14.6□□□□□ -0.07
H3F3B-201ENST00000254810 GLG1Q92896 1179 aa14.6□□□□□ -0.07
H3F3B-201ENST00000254810 HVCN1Q96D96 273 aa14.6□□□□□ -0.07
H3F3B-201ENST00000254810 SCLT1Q96NL6 688 aa14.6□□□□□ -0.07
H3F3B-201ENST00000254810 PSMD1Q99460 953 aa14.6□□□□□ -0.07
H3F3B-201ENST00000254810 ADAM7Q9H2U9 754 aa14.6□□□□□ -0.07
H3F3B-201ENST00000254810 MTMR4Q9NYA4 1195 aa14.6□□□□□ -0.07
H3F3B-201ENST00000254810 SUCLA2Q9P2R7 463 aaPredicted RBP14.6□□□□□ -0.07
H3F3B-201ENST00000254810 TNRC6CQ9HCJ0 1690 aaKnown RBP14.6□□□□□ -0.07
H3F3B-201ENST00000254810 RSPH10B2B2RC85 870 aa14.6□□□□□ -0.07
H3F3B-201ENST00000254810 USP17L15C9J2P7 530 aa14.6□□□□□ -0.07
H3F3B-201ENST00000254810 USP17L13C9JLJ4 530 aa14.6□□□□□ -0.07
H3F3B-201ENST00000254810 USP17L11C9JVI0 530 aa14.6□□□□□ -0.07
H3F3B-201ENST00000254810 USP17L18D6R9N7 530 aa14.6□□□□□ -0.07
H3F3B-201ENST00000254810 USP17L22D6RA61 530 aa14.6□□□□□ -0.07
H3F3B-201ENST00000254810 USP17L17D6RBQ6 530 aa14.6□□□□□ -0.07
H3F3B-201ENST00000254810 USP17L19D6RCP7 530 aa14.6□□□□□ -0.07
H3F3B-201ENST00000254810 USP17L20D6RJB6 530 aa14.6□□□□□ -0.07
H3F3B-201ENST00000254810 BUB1BO60566 1050 aaPredicted RBP14.6□□□□□ -0.07
H3F3B-201ENST00000254810 GFPT2O94808 682 aa14.6□□□□□ -0.07
H3F3B-201ENST00000254810 AFPP02771 609 aaKnown RBP14.6□□□□□ -0.07
H3F3B-201ENST00000254810 RSPH10BP0C881 870 aa14.6□□□□□ -0.07
H3F3B-201ENST00000254810 PRKCIP41743 596 aa14.6□□□□□ -0.07
H3F3B-201ENST00000254810 USP17L24Q0WX57 530 aa14.6□□□□□ -0.07
H3F3B-201ENST00000254810 LACTB2Q53H82 288 aaPredicted RBP14.6□□□□□ -0.07
H3F3B-201ENST00000254810 C10orf76Q5T2E6 689 aa14.6□□□□□ -0.07
H3F3B-201ENST00000254810 AADACL2Q6P093 401 aa14.6□□□□□ -0.07
H3F3B-201ENST00000254810 USP17L6PQ6QN14 398 aa14.6□□□□□ -0.07
H3F3B-201ENST00000254810 SGSM3Q96HU1 749 aa14.6□□□□□ -0.07
H3F3B-201ENST00000254810 XPO6Q96QU8 1125 aaKnown RBP14.6□□□□□ -0.07
H3F3B-201ENST00000254810 BMP2KQ9NSY1 1161 aaPredicted RBP14.6□□□□□ -0.07
H3F3B-201ENST00000254810 ARMCX3Q9UH62 379 aaPredicted RBP14.6□□□□□ -0.07
H3F3B-201ENST00000254810 COL16A1Q07092 1604 aaPredicted RBP14.6□□□□□ -0.07
H3F3B-201ENST00000254810 CCDC188H7C350 402 aa14.59□□□□□ -0.07
H3F3B-201ENST00000254810 DDX3YO15523 660 aaKnown RBP14.59□□□□□ -0.07
H3F3B-201ENST00000254810 PPFIA2O75334 1257 aa14.59□□□□□ -0.07
H3F3B-201ENST00000254810 GALCP54803 685 aa14.59□□□□□ -0.07
H3F3B-201ENST00000254810 GSTO1P78417 241 aa14.59□□□□□ -0.07
H3F3B-201ENST00000254810 ZNF211Q13398 564 aaPredicted RBP14.59□□□□□ -0.07
H3F3B-201ENST00000254810 EDRF1Q3B7T1 1238 aa14.59□□□□□ -0.07
H3F3B-201ENST00000254810 ERMARDQ5T6L9 678 aa14.59□□□□□ -0.07
H3F3B-201ENST00000254810 SFR1Q86XK3 245 aa14.59□□□□□ -0.07
H3F3B-201ENST00000254810 C3orf20Q8ND61 904 aa14.59□□□□□ -0.07
H3F3B-201ENST00000254810 SLITRK6Q9H5Y7 841 aa14.59□□□□□ -0.07
H3F3B-201ENST00000254810 ZDHHC18Q9NUE0 388 aa14.59□□□□□ -0.07
H3F3B-201ENST00000254810 GPR75-ASB3A0A0A6YYF3 556 aa14.59□□□□□ -0.07
H3F3B-201ENST00000254810 USP17L10C9JJH3 530 aa14.59□□□□□ -0.07
H3F3B-201ENST00000254810 KRT18P05783 430 aaKnown RBP14.59□□□□□ -0.07
H3F3B-201ENST00000254810 H2AFZP0C0S5 128 aa14.59□□□□□ -0.07
H3F3B-201ENST00000254810 SCP2P22307 547 aa14.59□□□□□ -0.07
H3F3B-201ENST00000254810 RDXP35241 583 aaKnown RBP14.59□□□□□ -0.07
H3F3B-201ENST00000254810 MTMR3Q13615 1198 aa14.59□□□□□ -0.07
H3F3B-201ENST00000254810 GIT2Q14161 759 aa14.59□□□□□ -0.07
H3F3B-201ENST00000254810 H2AFVQ71UI9 128 aa14.59□□□□□ -0.07
H3F3B-201ENST00000254810 CPLX4Q7Z7G2 160 aa14.59□□□□□ -0.07
H3F3B-201ENST00000254810 RNF25Q96BH1 459 aaPredicted RBP14.59□□□□□ -0.07
H3F3B-201ENST00000254810 ZNF317Q96PQ6 595 aaPredicted RBP14.59□□□□□ -0.07
H3F3B-201ENST00000254810 P2RX7Q99572 595 aaKnown RBP14.59□□□□□ -0.07
H3F3B-201ENST00000254810 DHX36Q9H2U1 1008 aaKnown RBP14.59□□□□□ -0.07
H3F3B-201ENST00000254810 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.59□□□□□ -0.07
H3F3B-201ENST00000254810 RTCBQ9Y3I0 505 aaKnown RBP14.59□□□□□ -0.07
H3F3B-201ENST00000254810 KIF13BQ9NQT8 1826 aa14.59□□□□□ -0.07
H3F3B-201ENST00000254810 SNHG28P0DPA3 235 aa14.58□□□□□ -0.07
H3F3B-201ENST00000254810 CDR1P51861 262 aa14.58□□□□□ -0.07
H3F3B-201ENST00000254810 IFI35P80217 286 aaPredicted RBP14.58□□□□□ -0.07
H3F3B-201ENST00000254810 PABPC4Q13310 644 aaKnown RBP eCLIP14.58□□□□□ -0.073e-11■■■□□ 15.9
H3F3B-201ENST00000254810 XRCC4Q13426 336 aa14.58□□□□□ -0.07
H3F3B-201ENST00000254810 NEDD9Q14511 834 aa14.58□□□□□ -0.07
H3F3B-201ENST00000254810 GKAP1Q5VSY0 366 aaPredicted RBP14.58□□□□□ -0.07
H3F3B-201ENST00000254810 TCERG1LQ5VWI1 586 aa14.58□□□□□ -0.07
H3F3B-201ENST00000254810 N4BP2L2Q92802 583 aaPredicted RBP14.58□□□□□ -0.07
H3F3B-201ENST00000254810 SLC35C1Q96A29 364 aa14.58□□□□□ -0.07
H3F3B-201ENST00000254810 SETDB2Q96T68 719 aa14.58□□□□□ -0.07
H3F3B-201ENST00000254810 REEP2Q9BRK0 252 aa14.58□□□□□ -0.07
H3F3B-201ENST00000254810 FAM129AQ9BZQ8 928 aa14.58□□□□□ -0.07
H3F3B-201ENST00000254810 ZNF287Q9HBT7 754 aa14.58□□□□□ -0.07
H3F3B-201ENST00000254810 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.58□□□□□ -0.07
H3F3B-201ENST00000254810 PNMA6FA0A0J9YX94 578 aa14.58□□□□□ -0.08
H3F3B-201ENST00000254810 SMIM23A6NLE4 172 aa14.58□□□□□ -0.08
H3F3B-201ENST00000254810 CLIC2O15247 247 aa14.58□□□□□ -0.08
H3F3B-201ENST00000254810 C21orf2O43822 256 aa14.58□□□□□ -0.08
H3F3B-201ENST00000254810 CTNND1O60716 968 aaKnown RBP14.58□□□□□ -0.08
H3F3B-201ENST00000254810 FLOT1O75955 427 aa14.58□□□□□ -0.08
H3F3B-201ENST00000254810 CHN1P15882 459 aa14.58□□□□□ -0.08
H3F3B-201ENST00000254810 ELF1P32519 619 aa14.58□□□□□ -0.08
H3F3B-201ENST00000254810 DPP8Q6V1X1 898 aaPredicted RBP14.58□□□□□ -0.08
H3F3B-201ENST00000254810 FRMD5Q7Z6J6 570 aa14.58□□□□□ -0.08
H3F3B-201ENST00000254810 GLYCTKQ8IVS8 523 aa14.58□□□□□ -0.08
H3F3B-201ENST00000254810 ATXN2LQ8WWM7 1075 aaKnown RBP14.58□□□□□ -0.08
H3F3B-201ENST00000254810 ARHGEF26Q96DR7 871 aa14.58□□□□□ -0.08
H3F3B-201ENST00000254810 CHMP6Q96FZ7 201 aa14.58□□□□□ -0.08
H3F3B-201ENST00000254810 GCNT4Q9P109 453 aa14.58□□□□□ -0.08
H3F3B-201ENST00000254810 SUFUQ9UMX1 484 aa14.58□□□□□ -0.08
H3F3B-201ENST00000254810 ASTN1O14525 1302 aa14.58□□□□□ -0.08
H3F3B-201ENST00000254810 SPDYE3A6NKU9 549 aa14.57□□□□□ -0.08
H3F3B-201ENST00000254810 hCG_1984214I3L0E3 225 aa14.57□□□□□ -0.08
H3F3B-201ENST00000254810 PPIP5K2O43314 1243 aa14.57□□□□□ -0.08
H3F3B-201ENST00000254810 ECM2O94769 699 aaPredicted RBP14.57□□□□□ -0.08
H3F3B-201ENST00000254810 ABCB4P21439 1286 aa14.57□□□□□ -0.08
H3F3B-201ENST00000254810 IFFO1Q0D2I5 559 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms