RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 SOX10P56693 466 aa15.75■□□□□ 0.11
VPS25-201ENST00000253794 HIC1Q14526 733 aa15.75■□□□□ 0.11
VPS25-201ENST00000253794 NAALADL2Q58DX5 795 aa15.75■□□□□ 0.11
VPS25-201ENST00000253794 CCDC73Q6ZRK6 1079 aa15.75■□□□□ 0.11
VPS25-201ENST00000253794 KCNK18Q7Z418 384 aa15.75■□□□□ 0.11
VPS25-201ENST00000253794 FAM126BQ8IXS8 530 aa15.75■□□□□ 0.11
VPS25-201ENST00000253794 EXOC8Q8IYI6 725 aa15.75■□□□□ 0.11
VPS25-201ENST00000253794 LINC01465Q8N7H1 131 aa15.75■□□□□ 0.11
VPS25-201ENST00000253794 LRRC15Q8TF66 581 aa15.75■□□□□ 0.11
VPS25-201ENST00000253794 MRPS27Q92552 414 aaKnown RBP15.75■□□□□ 0.11
VPS25-201ENST00000253794 VTI1AQ96AJ9 217 aa15.75■□□□□ 0.11
VPS25-201ENST00000253794 CDK5RAP3Q96JB5 506 aa15.75■□□□□ 0.11
VPS25-201ENST00000253794 CTAGE1Q96RT6 745 aa15.75■□□□□ 0.11
VPS25-201ENST00000253794 PYM1Q9BRP8 204 aaKnown RBP15.75■□□□□ 0.11
VPS25-201ENST00000253794 CUEDC2Q9H467 287 aa15.75■□□□□ 0.11
VPS25-201ENST00000253794 BLOC1S4Q9NUP1 217 aa15.75■□□□□ 0.11
VPS25-201ENST00000253794 SETD4Q9NVD3 440 aa15.75■□□□□ 0.11
VPS25-201ENST00000253794 FAM13BQ9NYF5 915 aa15.75■□□□□ 0.11
VPS25-201ENST00000253794 SEPT9Q9UHD8 586 aaPredicted RBP15.75■□□□□ 0.11
VPS25-201ENST00000253794 MAGEB2O15479 319 aa15.74■□□□□ 0.11
VPS25-201ENST00000253794 MAFO75444 373 aaPredicted RBP15.74■□□□□ 0.11
VPS25-201ENST00000253794 C22orf31O95567 290 aa15.74■□□□□ 0.11
VPS25-201ENST00000253794 CD4P01730 458 aa15.74■□□□□ 0.11
VPS25-201ENST00000253794 RFC5P40937 340 aa15.74■□□□□ 0.11
VPS25-201ENST00000253794 GDF6Q6KF10 455 aaPredicted RBP15.74■□□□□ 0.11
VPS25-201ENST00000253794 PIGOQ8TEQ8 1089 aa15.74■□□□□ 0.11
VPS25-201ENST00000253794 DHX33Q9H6R0 707 aaKnown RBP15.74■□□□□ 0.11
VPS25-201ENST00000253794 PDLIM7Q9NR12 457 aa15.74■□□□□ 0.11
VPS25-201ENST00000253794 LOXHD1Q8IVV2 1947 aa15.74■□□□□ 0.11
VPS25-201ENST00000253794 TMEM150BA6NC51 233 aa15.73■□□□□ 0.11
VPS25-201ENST00000253794 E9PMD0 336 aa15.73■□□□□ 0.11
VPS25-201ENST00000253794 GAS2O43903 313 aaKnown RBP15.73■□□□□ 0.11
VPS25-201ENST00000253794 RPLP2P05387 115 aaKnown RBP15.73■□□□□ 0.11
VPS25-201ENST00000253794 PFKFB1P16118 471 aa15.73■□□□□ 0.11
VPS25-201ENST00000253794 SLC12A3P55017 1021 aa15.73■□□□□ 0.11
VPS25-201ENST00000253794 NPEPPSP55786 919 aa15.73■□□□□ 0.11
VPS25-201ENST00000253794 RBL2Q08999 1139 aa15.73■□□□□ 0.11
VPS25-201ENST00000253794 LRRC26Q2I0M4 334 aa15.73■□□□□ 0.11
VPS25-201ENST00000253794 RRAGBQ5VZM2 374 aa15.73■□□□□ 0.11
VPS25-201ENST00000253794 PLA2G4FQ68DD2 849 aa15.73■□□□□ 0.11
VPS25-201ENST00000253794 MTHFD1LQ6UB35 978 aa15.73■□□□□ 0.11
VPS25-201ENST00000253794 RPAINQ86UA6 219 aa15.73■□□□□ 0.11
VPS25-201ENST00000253794 SERINC5Q86VE9 423 aa15.73■□□□□ 0.11
VPS25-201ENST00000253794 SYT2Q8N9I0 419 aaPredicted RBP15.73■□□□□ 0.11
VPS25-201ENST00000253794 LARP4BQ92615 738 aaKnown RBP15.73■□□□□ 0.11
VPS25-201ENST00000253794 RAD54LQ92698 747 aa15.73■□□□□ 0.11
VPS25-201ENST00000253794 CEP170P1Q96L14 293 aa15.73■□□□□ 0.11
VPS25-201ENST00000253794 JPH2Q9BR39 696 aaPredicted RBP15.73■□□□□ 0.11
VPS25-201ENST00000253794 MAGEF1Q9HAY2 307 aa15.73■□□□□ 0.11
VPS25-201ENST00000253794 KCND2Q9NZV8 630 aa15.73■□□□□ 0.11
VPS25-201ENST00000253794 USP25Q9UHP3 1055 aa15.73■□□□□ 0.11
VPS25-201ENST00000253794 TUBE1Q9UJT0 475 aa15.73■□□□□ 0.11
VPS25-201ENST00000253794 KCNH3Q9ULD8 1083 aa15.73■□□□□ 0.11
VPS25-201ENST00000253794 PCDHA2Q9Y5H9 948 aa15.73■□□□□ 0.11
VPS25-201ENST00000253794 ARID2Q68CP9 1835 aa15.73■□□□□ 0.11
VPS25-201ENST00000253794 A0A1B0GVL5 298 aa15.72■□□□□ 0.11
VPS25-201ENST00000253794 SMIM35A0A1B0GVV1 85 aa15.72■□□□□ 0.11
VPS25-201ENST00000253794 B4GALT4O60513 344 aa15.72■□□□□ 0.11
VPS25-201ENST00000253794 DGAT1O75907 488 aa15.72■□□□□ 0.11
VPS25-201ENST00000253794 ATN1P54259 1190 aaPredicted RBP15.72■□□□□ 0.11
VPS25-201ENST00000253794 RTP1P59025 263 aa15.72■□□□□ 0.11
VPS25-201ENST00000253794 UBE2HP62256 183 aa15.72■□□□□ 0.11
VPS25-201ENST00000253794 PTK7Q13308 1070 aa15.72■□□□□ 0.11
VPS25-201ENST00000253794 PTGISQ16647 500 aa15.72■□□□□ 0.11
VPS25-201ENST00000253794 MTERF2Q49AM1 385 aa15.72■□□□□ 0.11
VPS25-201ENST00000253794 XKR9Q5GH70 373 aa15.72■□□□□ 0.11
VPS25-201ENST00000253794 FAM47CQ5HY64 1035 aa15.72■□□□□ 0.11
VPS25-201ENST00000253794 TAF2Q6P1X5 1199 aa15.72■□□□□ 0.11
VPS25-201ENST00000253794 FSIP1Q8NA03 581 aa15.72■□□□□ 0.11
VPS25-201ENST00000253794 IQUBQ8NA54 791 aa15.72■□□□□ 0.11
VPS25-201ENST00000253794 ENGASEQ8NFI3 743 aa15.72■□□□□ 0.11
VPS25-201ENST00000253794 TRAPPC12Q8WVT3 735 aa15.72■□□□□ 0.11
VPS25-201ENST00000253794 BHMT2Q9H2M3 363 aa15.72■□□□□ 0.11
VPS25-201ENST00000253794 GOLPH3LQ9H4A5 285 aa15.72■□□□□ 0.11
VPS25-201ENST00000253794 ARHGEF35A5YM69 484 aa15.71■□□□□ 0.11
VPS25-201ENST00000253794 GOLGA6L4A6NEF3 574 aa15.71■□□□□ 0.11
VPS25-201ENST00000253794 TLR3O15455 904 aaKnown RBP15.71■□□□□ 0.11
VPS25-201ENST00000253794 TREHO43280 583 aa15.71■□□□□ 0.11
VPS25-201ENST00000253794 CAND2O75155 1236 aa15.71■□□□□ 0.11
VPS25-201ENST00000253794 GADD45BO75293 160 aaPredicted RBP15.71■□□□□ 0.11
VPS25-201ENST00000253794 PLA2G4BP0C869 781 aa15.71■□□□□ 0.11
VPS25-201ENST00000253794 KLRC1P26715 233 aa15.71■□□□□ 0.11
VPS25-201ENST00000253794 STAT6P42226 847 aa15.71■□□□□ 0.11
VPS25-201ENST00000253794 NDUFA8P51970 172 aa15.71■□□□□ 0.11
VPS25-201ENST00000253794 TLE2Q04725 743 aa15.71■□□□□ 0.11
VPS25-201ENST00000253794 TBC1D8BQ0IIM8 1120 aa15.71■□□□□ 0.11
VPS25-201ENST00000253794 ZRSR1Q15695 479 aaKnown RBP15.71■□□□□ 0.11
VPS25-201ENST00000253794 TRIM60Q495X7 471 aa15.71■□□□□ 0.11
VPS25-201ENST00000253794 RASSF8Q8NHQ8 419 aa15.71■□□□□ 0.11
VPS25-201ENST00000253794 TIPINQ9BVW5 301 aa15.71■□□□□ 0.11
VPS25-201ENST00000253794 XPNPEP1Q9NQW7 623 aa15.71■□□□□ 0.11
VPS25-201ENST00000253794 LMBRD1Q9NUN5 540 aa15.71■□□□□ 0.11
VPS25-201ENST00000253794 TRMT13Q9NUP7 481 aaKnown RBP15.71■□□□□ 0.11
VPS25-201ENST00000253794 A0A087WWV3 80 aa15.7■□□□□ 0.1
VPS25-201ENST00000253794 DCDC2CA8MYV0 355 aa15.7■□□□□ 0.1
VPS25-201ENST00000253794 POLR2DO15514 142 aaKnown RBP15.7■□□□□ 0.1
VPS25-201ENST00000253794 ACTN4O43707 911 aaKnown RBP15.7■□□□□ 0.1
VPS25-201ENST00000253794 CYP11B2P19099 503 aa15.7■□□□□ 0.1
VPS25-201ENST00000253794 GUCY2CP25092 1073 aa15.7■□□□□ 0.1
VPS25-201ENST00000253794 CHMP4BP1P59074 171 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms