RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 CDC23Q9UJX2 597 aa16.2■□□□□ 0.18
MBD4-201ENST00000249910 UBIAD1Q9Y5Z9 338 aa16.2■□□□□ 0.18
MBD4-201ENST00000249910 ARHGEF35A5YM69 484 aa16.19■□□□□ 0.18
MBD4-201ENST00000249910 HIP1RO75146 1068 aa16.19■□□□□ 0.18
MBD4-201ENST00000249910 TDRD12Q587J7 1177 aaKnown RBP16.19■□□□□ 0.18
MBD4-201ENST00000249910 ARHGEF16Q5VV41 709 aa16.19■□□□□ 0.18
MBD4-201ENST00000249910 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.19■□□□□ 0.18
MBD4-201ENST00000249910 ZNF720Q7Z2F6 126 aa16.19■□□□□ 0.18
MBD4-201ENST00000249910 ZC3H3Q8IXZ2 948 aaKnown RBP16.19■□□□□ 0.18
MBD4-201ENST00000249910 JADE2Q9NQC1 790 aa16.19■□□□□ 0.18
MBD4-201ENST00000249910 ZNF446Q9NWS9 450 aa16.19■□□□□ 0.18
MBD4-201ENST00000249910 TELO2Q9Y4R8 837 aa16.19■□□□□ 0.18
MBD4-201ENST00000249910 CALUO43852 315 aaPredicted RBP16.19■□□□□ 0.18
MBD4-201ENST00000249910 DDNO94850 711 aaPredicted RBP16.19■□□□□ 0.18
MBD4-201ENST00000249910 BCRP11274 1271 aa16.19■□□□□ 0.18
MBD4-201ENST00000249910 XRCC5P13010 732 aaKnown RBP16.19■□□□□ 0.18
MBD4-201ENST00000249910 HOXA7P31268 230 aaPredicted RBP16.19■□□□□ 0.18
MBD4-201ENST00000249910 SPA17Q15506 151 aa16.19■□□□□ 0.18
MBD4-201ENST00000249910 UGCGQ16739 394 aa16.19■□□□□ 0.18
MBD4-201ENST00000249910 HGSNATQ68CP4 663 aa16.19■□□□□ 0.18
MBD4-201ENST00000249910 PDXDC1Q6P996 788 aa16.19■□□□□ 0.18
MBD4-201ENST00000249910 PADI6Q6TGC4 694 aa16.19■□□□□ 0.18
MBD4-201ENST00000249910 RDH13Q8NBN7 331 aa16.19■□□□□ 0.18
MBD4-201ENST00000249910 IFIH1Q9BYX4 1025 aaKnown RBP16.19■□□□□ 0.18
MBD4-201ENST00000249910 PXMP2Q9NR77 195 aa16.19■□□□□ 0.18
MBD4-201ENST00000249910 ZNF112Q9UJU3 913 aa16.19■□□□□ 0.18
MBD4-201ENST00000249910 TISP43B9A030 160 aa16.18■□□□□ 0.18
MBD4-201ENST00000249910 KRT86O43790 486 aa16.18■□□□□ 0.18
MBD4-201ENST00000249910 ATP1A1P05023 1023 aaKnown RBP16.18■□□□□ 0.18
MBD4-201ENST00000249910 CLCN6P51797 869 aa16.18■□□□□ 0.18
MBD4-201ENST00000249910 CDK17Q00537 523 aa16.18■□□□□ 0.18
MBD4-201ENST00000249910 SP4Q02446 784 aa16.18■□□□□ 0.18
MBD4-201ENST00000249910 SLC20A2Q08357 652 aa16.18■□□□□ 0.18
MBD4-201ENST00000249910 TMEM132BQ14DG7 1078 aa16.18■□□□□ 0.18
MBD4-201ENST00000249910 ZMYM2Q9UBW7 1377 aa16.18■□□□□ 0.18
MBD4-201ENST00000249910 ATAD5Q96QE3 1844 aa16.18■□□□□ 0.18
MBD4-201ENST00000249910 P4HBP07237 508 aaKnown RBP16.18■□□□□ 0.18
MBD4-201ENST00000249910 BMT2Q1RMZ1 405 aa16.18■□□□□ 0.18
MBD4-201ENST00000249910 FAM133AQ8N9E0 248 aa16.18■□□□□ 0.18
MBD4-201ENST00000249910 ZNF214Q9UL59 606 aaPredicted RBP16.18■□□□□ 0.18
MBD4-201ENST00000249910 PCDHA13Q9Y5I0 950 aa16.18■□□□□ 0.18
MBD4-201ENST00000249910 FRMPD4Q14CM0 1322 aa16.18■□□□□ 0.18
MBD4-201ENST00000249910 USO1O60763 962 aaKnown RBP16.17■□□□□ 0.18
MBD4-201ENST00000249910 CCNE2O96020 404 aa16.17■□□□□ 0.18
MBD4-201ENST00000249910 H2AFXP16104 143 aaPredicted RBP16.17■□□□□ 0.18
MBD4-201ENST00000249910 GAP43P17677 238 aa16.17■□□□□ 0.18
MBD4-201ENST00000249910 CYP2J2P51589 502 aa16.17■□□□□ 0.18
MBD4-201ENST00000249910 NPEPPSP55786 919 aa16.17■□□□□ 0.18
MBD4-201ENST00000249910 CHMP4BP1P59074 171 aa16.17■□□□□ 0.18
MBD4-201ENST00000249910 KIF5AQ12840 1032 aa16.17■□□□□ 0.18
MBD4-201ENST00000249910 MAPK7Q13164 816 aa16.17■□□□□ 0.18
MBD4-201ENST00000249910 RAPGEF1Q13905 1077 aa16.17■□□□□ 0.18
MBD4-201ENST00000249910 DRC1Q96MC2 740 aa16.17■□□□□ 0.18
MBD4-201ENST00000249910 MLXIPQ9HAP2 919 aa16.17■□□□□ 0.18
MBD4-201ENST00000249910 GPRC5CQ9NQ84 441 aa16.17■□□□□ 0.18
MBD4-201ENST00000249910 CEP72Q9P209 647 aa16.17■□□□□ 0.18
MBD4-201ENST00000249910 RARRES1P49788 294 aa16.17■□□□□ 0.18
MBD4-201ENST00000249910 ZNF131P52739 623 aa16.17■□□□□ 0.18
MBD4-201ENST00000249910 RSRC2Q7L4I2 434 aaKnown RBP16.17■□□□□ 0.18
MBD4-201ENST00000249910 FRMD5Q7Z6J6 570 aa16.17■□□□□ 0.18
MBD4-201ENST00000249910 APOBEC3FQ8IUX4 373 aaKnown RBP16.17■□□□□ 0.18
MBD4-201ENST00000249910 SLC35C1Q96A29 364 aa16.17■□□□□ 0.18
MBD4-201ENST00000249910 AS3MTQ9HBK9 375 aa16.17■□□□□ 0.18
MBD4-201ENST00000249910 MYO1AQ9UBC5 1043 aa16.17■□□□□ 0.18
MBD4-201ENST00000249910 SALL4Q9UJQ4 1053 aa16.17■□□□□ 0.18
MBD4-201ENST00000249910 FAM184BQ9ULE4 1060 aa16.17■□□□□ 0.18
MBD4-201ENST00000249910 CLGNO14967 610 aa16.16■□□□□ 0.18
MBD4-201ENST00000249910 QARSP47897 775 aaKnown RBP16.16■□□□□ 0.18
MBD4-201ENST00000249910 VAV2P52735 878 aa16.16■□□□□ 0.18
MBD4-201ENST00000249910 AMPD2Q01433 879 aa16.16■□□□□ 0.18
MBD4-201ENST00000249910 PLA2G4FQ68DD2 849 aa16.16■□□□□ 0.18
MBD4-201ENST00000249910 GJB7Q6PEY0 223 aa16.16■□□□□ 0.18
MBD4-201ENST00000249910 DNAAF5Q86Y56 855 aa16.16■□□□□ 0.18
MBD4-201ENST00000249910 MYO6Q9UM54 1294 aa16.16■□□□□ 0.18
MBD4-201ENST00000249910 CAPN6Q9Y6Q1 641 aa16.16■□□□□ 0.18
MBD4-201ENST00000249910 FAM170AA1A519 330 aa16.16■□□□□ 0.18
MBD4-201ENST00000249910 AFPP02771 609 aaKnown RBP16.16■□□□□ 0.18
MBD4-201ENST00000249910 NR3C2P08235 984 aa16.16■□□□□ 0.18
MBD4-201ENST00000249910 EPB41P11171 864 aaKnown RBP16.16■□□□□ 0.18
MBD4-201ENST00000249910 RPL13P26373 211 aaKnown RBP16.16■□□□□ 0.18
MBD4-201ENST00000249910 YWHABP31946 246 aaKnown RBP16.16■□□□□ 0.18
MBD4-201ENST00000249910 GHRHRQ02643 423 aa16.16■□□□□ 0.18
MBD4-201ENST00000249910 EXOC3L4Q17RC7 722 aa16.16■□□□□ 0.18
MBD4-201ENST00000249910 SFMBT2Q5VUG0 894 aa16.16■□□□□ 0.18
MBD4-201ENST00000249910 SRGAP1Q7Z6B7 1085 aa16.16■□□□□ 0.18
MBD4-201ENST00000249910 REPS2Q8NFH8 660 aa16.16■□□□□ 0.18
MBD4-201ENST00000249910 IQCDQ96DY2 449 aa16.16■□□□□ 0.18
MBD4-201ENST00000249910 CAPZA3Q96KX2 299 aa16.16■□□□□ 0.18
MBD4-201ENST00000249910 GINM1Q9NU53 330 aa16.16■□□□□ 0.18
MBD4-201ENST00000249910 ADAMTS1Q9UHI8 967 aa16.16■□□□□ 0.18
MBD4-201ENST00000249910 SEC31AO94979 1220 aaKnown RBP16.15■□□□□ 0.18
MBD4-201ENST00000249910 PNMA6AP0CW24 399 aaPredicted RBP16.15■□□□□ 0.18
MBD4-201ENST00000249910 PON1P27169 355 aa16.15■□□□□ 0.18
MBD4-201ENST00000249910 DSG3P32926 999 aa16.15■□□□□ 0.18
MBD4-201ENST00000249910 ASTE1Q2TB18 679 aaPredicted RBP16.15■□□□□ 0.18
MBD4-201ENST00000249910 GPC2Q8N158 579 aa16.15■□□□□ 0.18
MBD4-201ENST00000249910 KCTD17Q8N5Z5 321 aa16.15■□□□□ 0.18
MBD4-201ENST00000249910 FHOD1Q9Y613 1164 aa16.15■□□□□ 0.18
MBD4-201ENST00000249910 ZNF185O15231 689 aa16.14■□□□□ 0.18
MBD4-201ENST00000249910 RGS20O76081 388 aa16.14■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms