RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 EPB41L5Q9HCM4 733 aa15.75■□□□□ 0.11
HIF3A-202ENST00000244303 RGL1Q9NZL6 768 aa15.75■□□□□ 0.11
HIF3A-202ENST00000244303 RABGAP1Q9Y3P9 1069 aa15.75■□□□□ 0.11
HIF3A-202ENST00000244303 RBBP6Q7Z6E9 1792 aaKnown RBP15.74■□□□□ 0.11
HIF3A-202ENST00000244303 CLIC2O15247 247 aa15.74■□□□□ 0.11
HIF3A-202ENST00000244303 TBCAO75347 108 aaKnown RBP15.74■□□□□ 0.11
HIF3A-202ENST00000244303 BMP3P12645 472 aa15.74■□□□□ 0.11
HIF3A-202ENST00000244303 ZNF76P36508 570 aa15.74■□□□□ 0.11
HIF3A-202ENST00000244303 GUCY2DQ02846 1103 aa15.74■□□□□ 0.11
HIF3A-202ENST00000244303 EPHA7Q15375 998 aa15.74■□□□□ 0.11
HIF3A-202ENST00000244303 BMT2Q1RMZ1 405 aa15.74■□□□□ 0.11
HIF3A-202ENST00000244303 KRT12Q99456 494 aa15.74■□□□□ 0.11
HIF3A-202ENST00000244303 NFU1Q9UMS0 254 aa15.74■□□□□ 0.11
HIF3A-202ENST00000244303 STK24Q9Y6E0 443 aa15.74■□□□□ 0.11
HIF3A-202ENST00000244303 MYH11P35749 1972 aa15.74■□□□□ 0.11
HIF3A-202ENST00000244303 SFI1A8K8P3 1242 aa15.74■□□□□ 0.11
HIF3A-202ENST00000244303 BTNL10A8MVZ5 291 aa15.74■□□□□ 0.11
HIF3A-202ENST00000244303 GOLGA8KD6RF30 607 aa15.74■□□□□ 0.11
HIF3A-202ENST00000244303 SHOX2O60902 331 aaPredicted RBP15.74■□□□□ 0.11
HIF3A-202ENST00000244303 C10orf76Q5T2E6 689 aa15.74■□□□□ 0.11
HIF3A-202ENST00000244303 SLC30A10Q6XR72 485 aa15.74■□□□□ 0.11
HIF3A-202ENST00000244303 CSRNP1Q96S65 589 aa15.74■□□□□ 0.11
HIF3A-202ENST00000244303 POLR3CQ9BUI4 534 aaPredicted RBP15.74■□□□□ 0.11
HIF3A-202ENST00000244303 GOLPH3Q9H4A6 298 aa15.74■□□□□ 0.11
HIF3A-202ENST00000244303 AJAP1Q9UKB5 411 aaPredicted RBP15.74■□□□□ 0.11
HIF3A-202ENST00000244303 BZW2Q9Y6E2 419 aaKnown RBP15.74■□□□□ 0.11
HIF3A-202ENST00000244303 OPA1O60313 960 aa15.73■□□□□ 0.11
HIF3A-202ENST00000244303 HSF2BPO75031 334 aa15.73■□□□□ 0.11
HIF3A-202ENST00000244303 EYA4O95677 639 aa15.73■□□□□ 0.11
HIF3A-202ENST00000244303 FAM153BP0C7A2 387 aa15.73■□□□□ 0.11
HIF3A-202ENST00000244303 EPB41P11171 864 aaKnown RBP15.73■□□□□ 0.11
HIF3A-202ENST00000244303 NNTQ13423 1086 aa15.73■□□□□ 0.11
HIF3A-202ENST00000244303 FAM153CQ494X1 144 aa15.73■□□□□ 0.11
HIF3A-202ENST00000244303 ALS2CLQ60I27 953 aa15.73■□□□□ 0.11
HIF3A-202ENST00000244303 SPICE1Q8N0Z3 855 aa15.73■□□□□ 0.11
HIF3A-202ENST00000244303 PIGOQ8TEQ8 1089 aa15.73■□□□□ 0.11
HIF3A-202ENST00000244303 IFT81Q8WYA0 676 aa15.73■□□□□ 0.11
HIF3A-202ENST00000244303 SLC35C1Q96A29 364 aa15.73■□□□□ 0.11
HIF3A-202ENST00000244303 RUFY1Q96T51 708 aa15.73■□□□□ 0.11
HIF3A-202ENST00000244303 METTL14Q9HCE5 456 aaKnown RBP15.73■□□□□ 0.11
HIF3A-202ENST00000244303 SIX2Q9NPC8 291 aa15.73■□□□□ 0.11
HIF3A-202ENST00000244303 GCNT4Q9P109 453 aa15.73■□□□□ 0.11
HIF3A-202ENST00000244303 FAM153AQ9UHL3 310 aa15.73■□□□□ 0.11
HIF3A-202ENST00000244303 NAGPAQ9UK23 515 aa15.73■□□□□ 0.11
HIF3A-202ENST00000244303 A0A1W2PRG0 241 aa15.73■□□□□ 0.11
HIF3A-202ENST00000244303 TCP10L2B9ZVM9 353 aa15.73■□□□□ 0.11
HIF3A-202ENST00000244303 KCNK3O14649 394 aa15.73■□□□□ 0.11
HIF3A-202ENST00000244303 SLC16A3O15427 465 aaKnown RBP15.73■□□□□ 0.11
HIF3A-202ENST00000244303 RPL13P26373 211 aaKnown RBP15.73■□□□□ 0.11
HIF3A-202ENST00000244303 POLD1P28340 1107 aa15.73■□□□□ 0.11
HIF3A-202ENST00000244303 PPFIA1Q13136 1202 aa15.73■□□□□ 0.11
HIF3A-202ENST00000244303 CTTNQ14247 550 aaKnown RBP15.73■□□□□ 0.11
HIF3A-202ENST00000244303 RINT1Q6NUQ1 792 aa15.73■□□□□ 0.11
HIF3A-202ENST00000244303 ALKBH5Q6P6C2 394 aaKnown RBP15.73■□□□□ 0.11
HIF3A-202ENST00000244303 GBP6Q6ZN66 633 aa15.73■□□□□ 0.11
HIF3A-202ENST00000244303 USP38Q8NB14 1042 aa15.73■□□□□ 0.11
HIF3A-202ENST00000244303 ZIM3Q96PE6 472 aa15.73■□□□□ 0.11
HIF3A-202ENST00000244303 PDGFDQ9GZP0 370 aaPredicted RBP15.73■□□□□ 0.11
HIF3A-202ENST00000244303 IKZF4Q9H2S9 585 aa15.73■□□□□ 0.11
HIF3A-202ENST00000244303 PCDHB13Q9Y5F0 798 aa15.73■□□□□ 0.11
HIF3A-202ENST00000244303 IGLV3-22A0A075B6J6 115 aa15.72■□□□□ 0.11
HIF3A-202ENST00000244303 PPFIA4O75335 1185 aa15.72■□□□□ 0.11
HIF3A-202ENST00000244303 COL2A1P02458 1487 aaPredicted RBP15.72■□□□□ 0.11
HIF3A-202ENST00000244303 CYP3A4P08684 503 aa15.72■□□□□ 0.11
HIF3A-202ENST00000244303 PRKCIP41743 596 aa15.72■□□□□ 0.11
HIF3A-202ENST00000244303 NOP2P46087 812 aaKnown RBP15.72■□□□□ 0.11
HIF3A-202ENST00000244303 RPS6KA1Q15418 735 aa15.72■□□□□ 0.11
HIF3A-202ENST00000244303 PTPROQ16827 1216 aa15.72■□□□□ 0.11
HIF3A-202ENST00000244303 TTMPQ5BVD1 217 aa15.72■□□□□ 0.11
HIF3A-202ENST00000244303 RSBN1LQ6PCB5 846 aaPredicted RBP15.72■□□□□ 0.11
HIF3A-202ENST00000244303 GJB7Q6PEY0 223 aa15.72■□□□□ 0.11
HIF3A-202ENST00000244303 BTNL9Q6UXG8 535 aa15.72■□□□□ 0.11
HIF3A-202ENST00000244303 TTLL6Q8N841 843 aa15.72■□□□□ 0.11
HIF3A-202ENST00000244303 TAF4BQ92750 862 aa15.72■□□□□ 0.11
HIF3A-202ENST00000244303 ARL8AQ96BM9 186 aa15.72■□□□□ 0.11
HIF3A-202ENST00000244303 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.72■□□□□ 0.11
HIF3A-202ENST00000244303 ZMYM2Q9UBW7 1377 aa15.72■□□□□ 0.11
HIF3A-202ENST00000244303 PRR12Q9ULL5 1215 aa15.72■□□□□ 0.11
HIF3A-202ENST00000244303 SPDYE2BA6NHP3 402 aa15.71■□□□□ 0.11
HIF3A-202ENST00000244303 TGFB1I1O43294 461 aa15.71■□□□□ 0.11
HIF3A-202ENST00000244303 RAD17O75943 681 aa15.71■□□□□ 0.11
HIF3A-202ENST00000244303 KIF4AO95239 1232 aa15.71■□□□□ 0.11
HIF3A-202ENST00000244303 SPDYE6P0CI01 402 aa15.71■□□□□ 0.11
HIF3A-202ENST00000244303 JAM2P57087 298 aa15.71■□□□□ 0.11
HIF3A-202ENST00000244303 PAK2Q13177 524 aa15.71■□□□□ 0.11
HIF3A-202ENST00000244303 CASKIN2Q8WXE0 1202 aa15.71■□□□□ 0.11
HIF3A-202ENST00000244303 OLFML3Q9NRN5 406 aa15.71■□□□□ 0.11
HIF3A-202ENST00000244303 TMOD2Q9NZR1 351 aa15.71■□□□□ 0.11
HIF3A-202ENST00000244303 CLRN2A0PK11 232 aa15.71■□□□□ 0.11
HIF3A-202ENST00000244303 PIK3CDO00329 1044 aa15.71■□□□□ 0.11
HIF3A-202ENST00000244303 RAD51CO43502 376 aa15.71■□□□□ 0.11
HIF3A-202ENST00000244303 FLOT1O75955 427 aa15.71■□□□□ 0.11
HIF3A-202ENST00000244303 NMT1P30419 496 aaKnown RBP15.71■□□□□ 0.11
HIF3A-202ENST00000244303 TRADDQ15628 312 aa15.71■□□□□ 0.11
HIF3A-202ENST00000244303 KLHL7Q8IXQ5 586 aa15.71■□□□□ 0.11
HIF3A-202ENST00000244303 LRRC57Q8N9N7 239 aa15.71■□□□□ 0.11
HIF3A-202ENST00000244303 CCDC43Q96MW1 224 aaKnown RBP15.71■□□□□ 0.11
HIF3A-202ENST00000244303 WDR18Q9BV38 432 aa15.71■□□□□ 0.11
HIF3A-202ENST00000244303 TMEM59LQ9UK28 342 aa15.71■□□□□ 0.11
HIF3A-202ENST00000244303 FBXL5Q9UKA1 691 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms