RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 FAM107AO95990 144 aa11.88□□□□□ -0.51
COPA-201ENST00000241704 ATF7P17544 494 aaPredicted RBP11.88□□□□□ -0.51
COPA-201ENST00000241704 ARL1P40616 181 aaPredicted RBP11.88□□□□□ -0.51
COPA-201ENST00000241704 SF3A3Q12874 501 aaKnown RBP eCLIP11.88□□□□□ -0.512e-7■■■□□ 15.7
COPA-201ENST00000241704 DBN1Q16643 649 aa11.88□□□□□ -0.51
COPA-201ENST00000241704 QRICH1Q2TAL8 776 aa11.88□□□□□ -0.51
COPA-201ENST00000241704 EXOC8Q8IYI6 725 aa11.88□□□□□ -0.51
COPA-201ENST00000241704 CEP170P1Q96L14 293 aa11.88□□□□□ -0.51
COPA-201ENST00000241704 CTTNBP2NLQ9P2B4 639 aa11.88□□□□□ -0.51
COPA-201ENST00000241704 ANKFY1Q9P2R3 1169 aa11.88□□□□□ -0.51
COPA-201ENST00000241704 FEM1BQ9UK73 627 aa11.88□□□□□ -0.51
COPA-201ENST00000241704 MEIS1O00470 390 aa11.88□□□□□ -0.51
COPA-201ENST00000241704 HEXIM1O94992 359 aaKnown RBP11.88□□□□□ -0.51
COPA-201ENST00000241704 ATP1A1P05023 1023 aaKnown RBP11.88□□□□□ -0.51
COPA-201ENST00000241704 FDPSP14324 419 aaKnown RBP11.88□□□□□ -0.51
COPA-201ENST00000241704 KLRK1P26718 216 aa11.88□□□□□ -0.51
COPA-201ENST00000241704 POLR2FP61218 127 aaKnown RBP11.88□□□□□ -0.51
COPA-201ENST00000241704 PTGISQ16647 500 aa11.88□□□□□ -0.51
COPA-201ENST00000241704 MAN2A1Q16706 1144 aa11.88□□□□□ -0.51
COPA-201ENST00000241704 SNRNP48Q6IEG0 339 aaKnown RBP11.88□□□□□ -0.51
COPA-201ENST00000241704 C16orf86Q6ZW13 317 aa11.88□□□□□ -0.51
COPA-201ENST00000241704 CCDC26Q8TAB7 109 aa11.88□□□□□ -0.51
COPA-201ENST00000241704 WHAMMQ8TF30 809 aa11.88□□□□□ -0.51
COPA-201ENST00000241704 ATP6V1G3Q96LB4 118 aa11.88□□□□□ -0.51
COPA-201ENST00000241704 HNRNPDLO14979 420 aaKnown RBP11.87□□□□□ -0.51
COPA-201ENST00000241704 XPOTO43592 962 aaKnown RBP11.87□□□□□ -0.51
COPA-201ENST00000241704 ABL1P00519 1130 aa11.87□□□□□ -0.51
COPA-201ENST00000241704 PDHBP11177 359 aa11.87□□□□□ -0.51
COPA-201ENST00000241704 PDXDC2PQ6P474 469 aa11.87□□□□□ -0.51
COPA-201ENST00000241704 SHC4Q6S5L8 630 aa11.87□□□□□ -0.51
COPA-201ENST00000241704 THAP9Q9H5L6 903 aa11.87□□□□□ -0.51
COPA-201ENST00000241704 CTDNEP1O95476 244 aa11.87□□□□□ -0.51
COPA-201ENST00000241704 ATP2C1P98194 919 aaPredicted RBP11.87□□□□□ -0.51
COPA-201ENST00000241704 CACNB1Q02641 598 aaPredicted RBP11.87□□□□□ -0.51
COPA-201ENST00000241704 FASTKD5Q7L8L6 764 aaKnown RBP11.87□□□□□ -0.51
COPA-201ENST00000241704 YTHDF3Q7Z739 585 aaKnown RBP11.87□□□□□ -0.51
COPA-201ENST00000241704 SYCE1Q8N0S2 351 aa11.87□□□□□ -0.51
COPA-201ENST00000241704 NSMCE1Q8WV22 266 aa11.87□□□□□ -0.51
COPA-201ENST00000241704 CCDC127Q96BQ5 260 aa11.87□□□□□ -0.51
COPA-201ENST00000241704 PHF20Q9BVI0 1012 aa11.87□□□□□ -0.51
COPA-201ENST00000241704 HOMER3Q9NSC5 361 aa11.87□□□□□ -0.51
COPA-201ENST00000241704 EMILIN3Q9NT22 766 aa11.87□□□□□ -0.51
COPA-201ENST00000241704 KNDC1Q76NI1 1749 aa11.87□□□□□ -0.51
COPA-201ENST00000241704 A0A1B0GTH6 734 aa11.87□□□□□ -0.51
COPA-201ENST00000241704 RASA1P20936 1047 aa11.87□□□□□ -0.51
COPA-201ENST00000241704 RNASELQ05823 741 aaKnown RBP11.87□□□□□ -0.51
COPA-201ENST00000241704 TAF1CQ15572 869 aaPredicted RBP11.87□□□□□ -0.51
COPA-201ENST00000241704 EXOC3L4Q17RC7 722 aa11.87□□□□□ -0.51
COPA-201ENST00000241704 CDC42EP5Q6NZY7 148 aa11.87□□□□□ -0.51
COPA-201ENST00000241704 KLHL7Q8IXQ5 586 aa11.87□□□□□ -0.51
COPA-201ENST00000241704 RAB3IPQ96QF0 476 aaPredicted RBP11.87□□□□□ -0.51
COPA-201ENST00000241704 RIOK1Q9BRS2 568 aaKnown RBP11.87□□□□□ -0.51
COPA-201ENST00000241704 ENTPD3O75355 529 aa11.87□□□□□ -0.51
COPA-201ENST00000241704 ZNF157P51786 506 aaPredicted RBP11.87□□□□□ -0.51
COPA-201ENST00000241704 CUL4BQ13620 913 aa11.87□□□□□ -0.51
COPA-201ENST00000241704 NR1I3Q14994 352 aa11.87□□□□□ -0.51
COPA-201ENST00000241704 SETDB1Q15047 1291 aa11.87□□□□□ -0.51
COPA-201ENST00000241704 GLE1Q53GS7 698 aaKnown RBP11.87□□□□□ -0.51
COPA-201ENST00000241704 UBL4BQ8N7F7 174 aa11.87□□□□□ -0.51
COPA-201ENST00000241704 PPFIBP2Q8ND30 876 aa11.87□□□□□ -0.51
COPA-201ENST00000241704 SLC4A9Q96Q91 983 aa11.87□□□□□ -0.51
COPA-201ENST00000241704 SENP2Q9HC62 589 aa11.87□□□□□ -0.51
COPA-201ENST00000241704 GGA3Q9NZ52 723 aa11.87□□□□□ -0.51
COPA-201ENST00000241704 AGTPBP1Q9UPW5 1226 aa11.87□□□□□ -0.51
COPA-201ENST00000241704 CFAP73A6NFT4 308 aa11.86□□□□□ -0.51
COPA-201ENST00000241704 TNPO2O14787 897 aaKnown RBP11.86□□□□□ -0.51
COPA-201ENST00000241704 DLATP10515 647 aaKnown RBP11.86□□□□□ -0.51
COPA-201ENST00000241704 ADCY2Q08462 1091 aa11.86□□□□□ -0.51
COPA-201ENST00000241704 ANGEL2Q5VTE6 544 aaKnown RBP11.86□□□□□ -0.51
COPA-201ENST00000241704 COL23A1Q86Y22 540 aaPredicted RBP11.86□□□□□ -0.51
COPA-201ENST00000241704 FAM20AQ96MK3 541 aa11.86□□□□□ -0.51
COPA-201ENST00000241704 CCDC77Q9BR77 488 aa11.86□□□□□ -0.51
COPA-201ENST00000241704 HPS5Q9UPZ3 1129 aa11.86□□□□□ -0.51
COPA-201ENST00000241704 ATXN2Q99700 1313 aaKnown RBP11.86□□□□□ -0.51
COPA-201ENST00000241704 SMIM23A6NLE4 172 aa11.86□□□□□ -0.51
COPA-201ENST00000241704 ARHGAP4P98171 946 aa11.86□□□□□ -0.51
COPA-201ENST00000241704 HDLBPQ00341 1268 aaKnown RBP11.86□□□□□ -0.51
COPA-201ENST00000241704 RPS6KA1Q15418 735 aa11.86□□□□□ -0.51
COPA-201ENST00000241704 KIAA1841Q6NSI8 718 aa11.86□□□□□ -0.51
COPA-201ENST00000241704 RNF168Q8IYW5 571 aaPredicted RBP11.86□□□□□ -0.51
COPA-201ENST00000241704 POMGNT1Q8WZA1 660 aa11.86□□□□□ -0.51
COPA-201ENST00000241704 GBP5Q96PP8 586 aa11.86□□□□□ -0.51
COPA-201ENST00000241704 RMDN3Q96TC7 470 aa11.86□□□□□ -0.51
COPA-201ENST00000241704 MAP3K14Q99558 947 aa11.86□□□□□ -0.51
COPA-201ENST00000241704 NOD2Q9HC29 1040 aa11.86□□□□□ -0.51
COPA-201ENST00000241704 RAVER2Q9HCJ3 691 aaKnown RBP11.86□□□□□ -0.51
COPA-201ENST00000241704 PLCB1Q9NQ66 1216 aa11.86□□□□□ -0.51
COPA-201ENST00000241704 NFU1Q9UMS0 254 aa11.86□□□□□ -0.51
COPA-201ENST00000241704 GMPSP49915 693 aaPredicted RBP11.86□□□□□ -0.51
COPA-201ENST00000241704 LRRC63Q05C16 580 aa11.86□□□□□ -0.51
COPA-201ENST00000241704 KDM7AQ6ZMT4 941 aa11.86□□□□□ -0.51
COPA-201ENST00000241704 INTS8Q75QN2 995 aaKnown RBP11.86□□□□□ -0.51
COPA-201ENST00000241704 CYFIP2Q96F07 1278 aa11.86□□□□□ -0.51
COPA-201ENST00000241704 CNOT10Q9H9A5 744 aaKnown RBP11.86□□□□□ -0.51
COPA-201ENST00000241704 ELP3Q9H9T3 547 aa11.86□□□□□ -0.51
COPA-201ENST00000241704 RNF146Q9NTX7 359 aa11.86□□□□□ -0.51
COPA-201ENST00000241704 TMEM260Q9NX78 707 aa11.86□□□□□ -0.51
COPA-201ENST00000241704 PARP2Q9UGN5 583 aa11.86□□□□□ -0.51
COPA-201ENST00000241704 POTEMA6NI47 508 aa11.86□□□□□ -0.51
COPA-201ENST00000241704 PSMC2P35998 433 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms