RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 VPS37BQ9H9H4 285 aa15.73■□□□□ 0.11
PRDM4-201ENST00000228437 ZBTB21Q9ULJ3 1066 aa15.73■□□□□ 0.11
PRDM4-201ENST00000228437 USP15Q9Y4E8 981 aaPredicted RBP15.73■□□□□ 0.11
PRDM4-201ENST00000228437 CLTCQ00610 1675 aaKnown RBP15.72■□□□□ 0.11
PRDM4-201ENST00000228437 TOM1O60784 492 aa15.72■□□□□ 0.11
PRDM4-201ENST00000228437 STAT3P40763 770 aa15.72■□□□□ 0.11
PRDM4-201ENST00000228437 USP11P51784 963 aa15.72■□□□□ 0.11
PRDM4-201ENST00000228437 AGBL2Q5U5Z8 902 aa15.72■□□□□ 0.11
PRDM4-201ENST00000228437 SLC30A9Q6PML9 568 aa15.72■□□□□ 0.11
PRDM4-201ENST00000228437 YTHDF3Q7Z739 585 aaKnown RBP15.72■□□□□ 0.11
PRDM4-201ENST00000228437 PIGBQ92521 554 aa15.72■□□□□ 0.11
PRDM4-201ENST00000228437 RAB3IPQ96QF0 476 aaPredicted RBP15.72■□□□□ 0.11
PRDM4-201ENST00000228437 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.72■□□□□ 0.11
PRDM4-201ENST00000228437 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.72■□□□□ 0.11
PRDM4-201ENST00000228437 PNMA3Q9UL41 463 aa15.72■□□□□ 0.11
PRDM4-201ENST00000228437 TMEM120BA0PK00 339 aa15.72■□□□□ 0.11
PRDM4-201ENST00000228437 TXNDC9O14530 226 aa15.72■□□□□ 0.11
PRDM4-201ENST00000228437 PRR16Q569H4 304 aa15.72■□□□□ 0.11
PRDM4-201ENST00000228437 AADACL2Q6P093 401 aa15.72■□□□□ 0.11
PRDM4-201ENST00000228437 CCHCR1Q8TD31 782 aa15.72■□□□□ 0.11
PRDM4-201ENST00000228437 FAM129AQ9BZQ8 928 aa15.72■□□□□ 0.11
PRDM4-201ENST00000228437 EXOC3O60645 756 aa15.72■□□□□ 0.11
PRDM4-201ENST00000228437 CYTH2Q99418 400 aa15.72■□□□□ 0.11
PRDM4-201ENST00000228437 NUDT12Q9BQG2 462 aa15.72■□□□□ 0.11
PRDM4-201ENST00000228437 TMEM47Q9BQJ4 181 aa15.72■□□□□ 0.11
PRDM4-201ENST00000228437 DLGAP2Q9P1A6 1054 aa15.72■□□□□ 0.11
PRDM4-201ENST00000228437 SIK3Q9Y2K2 1263 aa15.72■□□□□ 0.11
PRDM4-201ENST00000228437 PLA2G4BP0C869 781 aa15.71■□□□□ 0.11
PRDM4-201ENST00000228437 CETN1Q12798 172 aa15.71■□□□□ 0.11
PRDM4-201ENST00000228437 MTM1Q13496 603 aa15.71■□□□□ 0.11
PRDM4-201ENST00000228437 SMIM5Q71RC9 77 aa15.71■□□□□ 0.11
PRDM4-201ENST00000228437 C1orf54Q8WWF1 131 aa15.71■□□□□ 0.11
PRDM4-201ENST00000228437 FAM208AQ9UK61 1670 aaKnown RBP15.71■□□□□ 0.11
PRDM4-201ENST00000228437 RASSF10A6NK89 507 aa15.71■□□□□ 0.11
PRDM4-201ENST00000228437 GNA14O95837 355 aa15.71■□□□□ 0.11
PRDM4-201ENST00000228437 IFNB1P01574 187 aa15.71■□□□□ 0.11
PRDM4-201ENST00000228437 CTNNA2P26232 953 aa15.71■□□□□ 0.11
PRDM4-201ENST00000228437 ADCY2Q08462 1091 aa15.71■□□□□ 0.11
PRDM4-201ENST00000228437 USH1GQ495M9 461 aa15.71■□□□□ 0.11
PRDM4-201ENST00000228437 BARGINQ6ZT62 677 aa15.71■□□□□ 0.11
PRDM4-201ENST00000228437 SPATA21Q7Z572 469 aa15.71■□□□□ 0.11
PRDM4-201ENST00000228437 TMC3Q7Z5M5 1100 aa15.71■□□□□ 0.11
PRDM4-201ENST00000228437 C7orf25Q9BPX7 421 aa15.71■□□□□ 0.11
PRDM4-201ENST00000228437 MAGEF1Q9HAY2 307 aa15.71■□□□□ 0.11
PRDM4-201ENST00000228437 CFAP73A6NFT4 308 aa15.71■□□□□ 0.11
PRDM4-201ENST00000228437 DRD4P21917 467 aa15.71■□□□□ 0.11
PRDM4-201ENST00000228437 FECHP22830 423 aa15.71■□□□□ 0.11
PRDM4-201ENST00000228437 TARSP26639 723 aaKnown RBP15.71■□□□□ 0.11
PRDM4-201ENST00000228437 RNASELQ05823 741 aaKnown RBP15.71■□□□□ 0.11
PRDM4-201ENST00000228437 ZNF571Q7Z3V5 609 aaPredicted RBP15.71■□□□□ 0.11
PRDM4-201ENST00000228437 LRP10Q7Z4F1 713 aa15.71■□□□□ 0.11
PRDM4-201ENST00000228437 CLEC10AQ8IUN9 316 aa15.71■□□□□ 0.11
PRDM4-201ENST00000228437 RUBCNQ92622 972 aa15.71■□□□□ 0.11
PRDM4-201ENST00000228437 C18orf8Q96DM3 657 aa15.71■□□□□ 0.11
PRDM4-201ENST00000228437 ERP27Q96DN0 273 aa15.71■□□□□ 0.11
PRDM4-201ENST00000228437 GPR101Q96P66 508 aaPredicted RBP15.71■□□□□ 0.11
PRDM4-201ENST00000228437 KDM6AO15550 1401 aaPredicted RBP15.71■□□□□ 0.1
PRDM4-201ENST00000228437 UCHL3P15374 230 aa15.7■□□□□ 0.1
PRDM4-201ENST00000228437 KIAA1755Q5JYT7 1200 aa15.7■□□□□ 0.1
PRDM4-201ENST00000228437 BZW1Q7L1Q6 419 aaKnown RBP15.7■□□□□ 0.1
PRDM4-201ENST00000228437 SUPT20HQ8NEM7 779 aa15.7■□□□□ 0.1
PRDM4-201ENST00000228437 ALG13Q9NP73 1137 aaKnown RBP15.7■□□□□ 0.1
PRDM4-201ENST00000228437 DNM3Q9UQ16 869 aa15.7■□□□□ 0.1
PRDM4-201ENST00000228437 ABCC6O95255 1503 aa15.7■□□□□ 0.1
PRDM4-201ENST00000228437 LAD1O00515 517 aa15.7■□□□□ 0.1
PRDM4-201ENST00000228437 CALUO43852 315 aaPredicted RBP15.7■□□□□ 0.1
PRDM4-201ENST00000228437 GNAT1P11488 350 aa15.7■□□□□ 0.1
PRDM4-201ENST00000228437 ATP5DP30049 168 aa15.7■□□□□ 0.1
PRDM4-201ENST00000228437 RBM5P52756 815 aaKnown RBP eCLIP15.7■□□□□ 0.1
PRDM4-201ENST00000228437 TMEM154Q6P9G4 183 aa15.7■□□□□ 0.1
PRDM4-201ENST00000228437 ERMNQ8TAM6 284 aa15.7■□□□□ 0.1
PRDM4-201ENST00000228437 RNF217Q8TC41 542 aa15.7■□□□□ 0.1
PRDM4-201ENST00000228437 RAD54LQ92698 747 aa15.7■□□□□ 0.1
PRDM4-201ENST00000228437 TMEM237Q96Q45 408 aa15.7■□□□□ 0.1
PRDM4-201ENST00000228437 NAGPAQ9UK23 515 aa15.7■□□□□ 0.1
PRDM4-201ENST00000228437 ITIH3Q06033 890 aa15.7■□□□□ 0.1
PRDM4-201ENST00000228437 CCDC137Q6PK04 289 aaKnown RBP15.7■□□□□ 0.1
PRDM4-201ENST00000228437 JAMLQ86YT9 394 aa15.7■□□□□ 0.1
PRDM4-201ENST00000228437 SLC35G2Q8TBE7 412 aa15.7■□□□□ 0.1
PRDM4-201ENST00000228437 HEMGNQ9BXL5 484 aa15.7■□□□□ 0.1
PRDM4-201ENST00000228437 POTEFA5A3E0 1075 aa15.7■□□□□ 0.1
PRDM4-201ENST00000228437 POTEIP0CG38 1075 aa15.7■□□□□ 0.1
PRDM4-201ENST00000228437 CENPPQ6IPU0 288 aa15.7■□□□□ 0.1
PRDM4-201ENST00000228437 POTEGQ6S5H5 508 aa15.7■□□□□ 0.1
PRDM4-201ENST00000228437 POTEEQ6S8J3 1075 aa15.7■□□□□ 0.1
PRDM4-201ENST00000228437 INPP4AQ96PE3 977 aaPredicted RBP15.7■□□□□ 0.1
PRDM4-201ENST00000228437 KDM4CQ9H3R0 1056 aa15.7■□□□□ 0.1
PRDM4-201ENST00000228437 STK17AQ9UEE5 414 aa15.7■□□□□ 0.1
PRDM4-201ENST00000228437 FRMD4BQ9Y2L6 1034 aa15.7■□□□□ 0.1
PRDM4-201ENST00000228437 TECPR2O15040 1411 aa15.69■□□□□ 0.1
PRDM4-201ENST00000228437 PNPLA7Q6ZV29 1317 aa15.69■□□□□ 0.1
PRDM4-201ENST00000228437 KRT5P13647 590 aa15.69■□□□□ 0.1
PRDM4-201ENST00000228437 TPCN2Q8NHX9 752 aa15.69■□□□□ 0.1
PRDM4-201ENST00000228437 TTYH3Q9C0H2 523 aa15.69■□□□□ 0.1
PRDM4-201ENST00000228437 BATF3Q9NR55 127 aa15.69■□□□□ 0.1
PRDM4-201ENST00000228437 METTL5Q9NRN9 209 aaKnown RBP15.69■□□□□ 0.1
PRDM4-201ENST00000228437 BARHL2Q9NY43 387 aa15.69■□□□□ 0.1
PRDM4-201ENST00000228437 TRIM49P0CI25 452 aa15.69■□□□□ 0.1
PRDM4-201ENST00000228437 TRIM49CP0CI26 452 aa15.69■□□□□ 0.1
PRDM4-201ENST00000228437 RASSF2P50749 326 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms