RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 SF3B3Q15393 1217 aaKnown RBP19.91■□□□□ 0.78
CLIP2-201ENST00000223398 C1orf228Q6PIY5 440 aa19.91■□□□□ 0.78
CLIP2-201ENST00000223398 OR6J1Q8NGC5 347 aa19.91■□□□□ 0.78
CLIP2-201ENST00000223398 URGCPQ8TCY9 931 aa19.91■□□□□ 0.78
CLIP2-201ENST00000223398 GARSP41250 739 aaKnown RBP19.91■□□□□ 0.78
CLIP2-201ENST00000223398 TNFAIP2Q03169 654 aa19.91■□□□□ 0.78
CLIP2-201ENST00000223398 LRRC63Q05C16 580 aa19.91■□□□□ 0.78
CLIP2-201ENST00000223398 BARGINQ6ZT62 677 aa19.91■□□□□ 0.78
CLIP2-201ENST00000223398 UNC13DQ70J99 1090 aa19.91■□□□□ 0.78
CLIP2-201ENST00000223398 RRAGDQ9NQL2 400 aaPredicted RBP19.91■□□□□ 0.78
CLIP2-201ENST00000223398 KCNH4Q9UQ05 1017 aa19.91■□□□□ 0.78
CLIP2-201ENST00000223398 EFCAB8A8MWE9 144 aa19.91■□□□□ 0.78
CLIP2-201ENST00000223398 OAS2P29728 719 aaKnown RBP19.91■□□□□ 0.78
CLIP2-201ENST00000223398 SH2D3AQ9BRG2 576 aa19.91■□□□□ 0.78
CLIP2-201ENST00000223398 NHEJ1Q9H9Q4 299 aaPredicted RBP19.91■□□□□ 0.78
CLIP2-201ENST00000223398 ATP1A2P50993 1020 aa19.9■□□□□ 0.78
CLIP2-201ENST00000223398 GPC3P51654 580 aa19.9■□□□□ 0.78
CLIP2-201ENST00000223398 PPP1R18Q6NYC8 613 aa19.9■□□□□ 0.78
CLIP2-201ENST00000223398 NOC2LQ9Y3T9 749 aaKnown RBP19.9■□□□□ 0.78
CLIP2-201ENST00000223398 ASB14A6NK59 587 aa19.9■□□□□ 0.78
CLIP2-201ENST00000223398 GOLGA8CPA6NN73 597 aa19.9■□□□□ 0.78
CLIP2-201ENST00000223398 HUNKP57058 714 aa19.9■□□□□ 0.78
CLIP2-201ENST00000223398 PPP6R3Q5H9R7 873 aaPredicted RBP19.9■□□□□ 0.78
CLIP2-201ENST00000223398 CHMP6Q96FZ7 201 aa19.9■□□□□ 0.78
CLIP2-201ENST00000223398 TMEM39BQ9GZU3 492 aa19.9■□□□□ 0.78
CLIP2-201ENST00000223398 TRPM1Q7Z4N2 1603 aa19.9■□□□□ 0.78
CLIP2-201ENST00000223398 SPDYE2BA6NHP3 402 aa19.9■□□□□ 0.78
CLIP2-201ENST00000223398 S100BP04271 92 aaPredicted RBP19.9■□□□□ 0.78
CLIP2-201ENST00000223398 SPDYE6P0CI01 402 aa19.9■□□□□ 0.78
CLIP2-201ENST00000223398 SFNP31947 248 aa19.9■□□□□ 0.78
CLIP2-201ENST00000223398 B4GALNT4Q76KP1 1039 aa19.9■□□□□ 0.78
CLIP2-201ENST00000223398 SAAL1Q96ER3 474 aa19.9■□□□□ 0.78
CLIP2-201ENST00000223398 QRICH2Q9H0J4 1663 aa19.9■□□□□ 0.78
CLIP2-201ENST00000223398 ATP11AP98196 1134 aa19.9■□□□□ 0.78
CLIP2-201ENST00000223398 CYP4F22Q6NT55 531 aa19.9■□□□□ 0.78
CLIP2-201ENST00000223398 BBOF1Q8ND07 529 aa19.9■□□□□ 0.78
CLIP2-201ENST00000223398 ENOX1Q8TC92 643 aaKnown RBP19.9■□□□□ 0.78
CLIP2-201ENST00000223398 ANGPTL3Q9Y5C1 460 aa19.9■□□□□ 0.78
CLIP2-201ENST00000223398 TECPR2O15040 1411 aa19.9■□□□□ 0.78
CLIP2-201ENST00000223398 NR3C1P04150 777 aa19.89■□□□□ 0.78
CLIP2-201ENST00000223398 TCP11X2Q5H9J9 407 aa19.89■□□□□ 0.78
CLIP2-201ENST00000223398 RESP18Q5W5W9 173 aa19.89■□□□□ 0.78
CLIP2-201ENST00000223398 TEX2Q8IWB9 1127 aa19.89■□□□□ 0.78
CLIP2-201ENST00000223398 XXYLT1Q8NBI6 393 aa19.89■□□□□ 0.78
CLIP2-201ENST00000223398 TMEM106CQ9BVX2 250 aa19.89■□□□□ 0.78
CLIP2-201ENST00000223398 SLC8A2Q9UPR5 921 aa19.89■□□□□ 0.78
CLIP2-201ENST00000223398 CPP00450 1065 aa19.89■□□□□ 0.77
CLIP2-201ENST00000223398 CHGBP05060 677 aa19.89■□□□□ 0.77
CLIP2-201ENST00000223398 INHBAP08476 426 aa19.89■□□□□ 0.77
CLIP2-201ENST00000223398 SUGT1Q9Y2Z0 365 aa19.89■□□□□ 0.77
CLIP2-201ENST00000223398 CELF2O95319 508 aaKnown RBP19.89■□□□□ 0.77
CLIP2-201ENST00000223398 TROVE2P10155 538 aaKnown RBP eCLIP19.89■□□□□ 0.77
CLIP2-201ENST00000223398 ALX1Q15699 326 aa19.89■□□□□ 0.77
CLIP2-201ENST00000223398 ZNF280CQ8ND82 737 aa19.89■□□□□ 0.77
CLIP2-201ENST00000223398 LRRC7Q96NW7 1537 aa19.89■□□□□ 0.77
CLIP2-201ENST00000223398 ZMYND10O75800 440 aa19.89■□□□□ 0.77
CLIP2-201ENST00000223398 HEXIM1O94992 359 aaKnown RBP19.89■□□□□ 0.77
CLIP2-201ENST00000223398 PSMA2P25787 234 aa19.89■□□□□ 0.77
CLIP2-201ENST00000223398 PSMC5P62195 406 aa19.89■□□□□ 0.77
CLIP2-201ENST00000223398 TSPY1Q01534 308 aa19.89■□□□□ 0.77
CLIP2-201ENST00000223398 ARL13BQ3SXY8 428 aa19.89■□□□□ 0.77
CLIP2-201ENST00000223398 BEST2Q8NFU1 509 aa19.89■□□□□ 0.77
CLIP2-201ENST00000223398 GCOM2Q9BZD3 368 aaPredicted RBP19.89■□□□□ 0.77
CLIP2-201ENST00000223398 IRAK4Q9NWZ3 460 aa19.89■□□□□ 0.77
CLIP2-201ENST00000223398 SLC9A2Q9UBY0 812 aa19.89■□□□□ 0.77
CLIP2-201ENST00000223398 DNAJC12Q9UKB3 198 aa19.89■□□□□ 0.77
CLIP2-201ENST00000223398 PYCARDQ9ULZ3 195 aa19.89■□□□□ 0.77
CLIP2-201ENST00000223398 CLGNO14967 610 aa19.89■□□□□ 0.77
CLIP2-201ENST00000223398 DYNC1LI2O43237 492 aaPredicted RBP19.89■□□□□ 0.77
CLIP2-201ENST00000223398 NOL3O60936 208 aaKnown RBP19.89■□□□□ 0.77
CLIP2-201ENST00000223398 NTSR2O95665 410 aa19.89■□□□□ 0.77
CLIP2-201ENST00000223398 CTSHP09668 335 aa19.89■□□□□ 0.77
CLIP2-201ENST00000223398 LMNB2Q03252 620 aa19.89■□□□□ 0.77
CLIP2-201ENST00000223398 SNAPC2Q13487 334 aa19.89■□□□□ 0.77
CLIP2-201ENST00000223398 GAS2L3Q86XJ1 694 aa19.89■□□□□ 0.77
CLIP2-201ENST00000223398 ELMOD1Q8N336 334 aa19.89■□□□□ 0.77
CLIP2-201ENST00000223398 C6orf222P0C671 652 aaPredicted RBP19.88■□□□□ 0.77
CLIP2-201ENST00000223398 ATP1A3P13637 1013 aa19.88■□□□□ 0.77
CLIP2-201ENST00000223398 COASYQ13057 564 aa19.88■□□□□ 0.77
CLIP2-201ENST00000223398 BAATQ14032 418 aaPredicted RBP19.88■□□□□ 0.77
CLIP2-201ENST00000223398 KRT31Q15323 416 aa19.88■□□□□ 0.77
CLIP2-201ENST00000223398 TMEM270Q6UE05 265 aa19.88■□□□□ 0.77
CLIP2-201ENST00000223398 PPP4R3CPQ6ZMV5 832 aa19.88■□□□□ 0.77
CLIP2-201ENST00000223398 ATP6V1E2Q96A05 226 aa19.88■□□□□ 0.77
CLIP2-201ENST00000223398 PPP1R13BQ96KQ4 1090 aa19.88■□□□□ 0.77
CLIP2-201ENST00000223398 EFCC1Q9HA90 598 aa19.88■□□□□ 0.77
CLIP2-201ENST00000223398 PIDD1Q9HB75 910 aa19.88■□□□□ 0.77
CLIP2-201ENST00000223398 MYOZ2Q9NPC6 264 aa19.88■□□□□ 0.77
CLIP2-201ENST00000223398 RNF40O75150 1001 aa19.88■□□□□ 0.77
CLIP2-201ENST00000223398 ADAMTS1Q9UHI8 967 aa19.88■□□□□ 0.77
CLIP2-201ENST00000223398 IQSEC2Q5JU85 1478 aa19.88■□□□□ 0.77
CLIP2-201ENST00000223398 SERPING1P05155 500 aa19.88■□□□□ 0.77
CLIP2-201ENST00000223398 DPYSL4O14531 572 aa19.88■□□□□ 0.77
CLIP2-201ENST00000223398 RBBP5Q15291 538 aaKnown RBP19.88■□□□□ 0.77
CLIP2-201ENST00000223398 ORC4O43929 436 aa19.87■□□□□ 0.77
CLIP2-201ENST00000223398 RPUSD2Q8IZ73 545 aaKnown RBP19.87■□□□□ 0.77
CLIP2-201ENST00000223398 MYRIPQ8NFW9 859 aa19.87■□□□□ 0.77
CLIP2-201ENST00000223398 EIF2AK1Q9BQI3 630 aaKnown RBP19.87■□□□□ 0.77
CLIP2-201ENST00000223398 STK36Q9NRP7 1315 aa19.87■□□□□ 0.77
CLIP2-201ENST00000223398 PLTPP55058 493 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 153.5 ms