RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 FAM200BP0CF97 657 aa14.81□□□□□ -0.04
GABPB1-201ENST00000220429 TMOD1P28289 359 aa14.81□□□□□ -0.04
GABPB1-201ENST00000220429 TMED1Q13445 227 aa14.81□□□□□ -0.04
GABPB1-201ENST00000220429 ARL6IP4Q66PJ3 421 aaKnown RBP14.81□□□□□ -0.04
GABPB1-201ENST00000220429 ANKS4BQ8N8V4 417 aa14.81□□□□□ -0.04
GABPB1-201ENST00000220429 SMYD1Q8NB12 490 aa14.81□□□□□ -0.04
GABPB1-201ENST00000220429 GSDMAQ96QA5 445 aa14.81□□□□□ -0.04
GABPB1-201ENST00000220429 IWS1Q96ST2 819 aa14.81□□□□□ -0.04
GABPB1-201ENST00000220429 GOLGB1Q14789 3259 aaKnown RBP14.81□□□□□ -0.04
GABPB1-201ENST00000220429 RFC5P40937 340 aa14.8□□□□□ -0.04
GABPB1-201ENST00000220429 KCNJ2P63252 427 aa14.8□□□□□ -0.04
GABPB1-201ENST00000220429 KLC1Q07866 573 aa14.8□□□□□ -0.04
GABPB1-201ENST00000220429 TMC4Q7Z404 712 aa14.8□□□□□ -0.04
GABPB1-201ENST00000220429 SMYD4Q8IYR2 804 aaPredicted RBP14.8□□□□□ -0.04
GABPB1-201ENST00000220429 CEP95Q96GE4 821 aa14.8□□□□□ -0.04
GABPB1-201ENST00000220429 VCXQ9H320 206 aa14.8□□□□□ -0.04
GABPB1-201ENST00000220429 JADE2Q9NQC1 790 aa14.8□□□□□ -0.04
GABPB1-201ENST00000220429 ABHD10Q9NUJ1 306 aa14.8□□□□□ -0.04
GABPB1-201ENST00000220429 REXO2Q9Y3B8 237 aaKnown RBP14.8□□□□□ -0.04
GABPB1-201ENST00000220429 ATP6V0A2Q9Y487 856 aa14.8□□□□□ -0.04
GABPB1-201ENST00000220429 CCDC194A0A1B0GVG4 234 aa14.8□□□□□ -0.04
GABPB1-201ENST00000220429 DRD4P21917 467 aa14.8□□□□□ -0.04
GABPB1-201ENST00000220429 ITIH3Q06033 890 aa14.8□□□□□ -0.04
GABPB1-201ENST00000220429 CCDC122Q5T0U0 273 aa14.8□□□□□ -0.04
GABPB1-201ENST00000220429 USP17L2Q6R6M4 530 aa14.8□□□□□ -0.04
GABPB1-201ENST00000220429 CCDC80Q76M96 950 aa14.8□□□□□ -0.04
GABPB1-201ENST00000220429 SPZ1Q9BXG8 430 aa14.8□□□□□ -0.04
GABPB1-201ENST00000220429 TMBIM4Q9HC24 238 aa14.8□□□□□ -0.04
GABPB1-201ENST00000220429 EPN1Q9Y6I3 576 aaPredicted RBP14.8□□□□□ -0.04
GABPB1-201ENST00000220429 NRXN2Q9P2S2 1712 aa14.8□□□□□ -0.04
GABPB1-201ENST00000220429 PAEPP09466 180 aa14.79□□□□□ -0.04
GABPB1-201ENST00000220429 CDC25AP30304 524 aa14.79□□□□□ -0.04
GABPB1-201ENST00000220429 LONP1P36776 959 aaKnown RBP14.79□□□□□ -0.04
GABPB1-201ENST00000220429 BPIFB4P59827 614 aa14.79□□□□□ -0.04
GABPB1-201ENST00000220429 PRPF4BQ13523 1007 aaKnown RBP14.79□□□□□ -0.04
GABPB1-201ENST00000220429 INF2Q27J81 1249 aa14.79□□□□□ -0.04
GABPB1-201ENST00000220429 KLHL10Q6JEL2 608 aa14.79□□□□□ -0.04
GABPB1-201ENST00000220429 APTXQ7Z2E3 356 aaKnown RBP14.79□□□□□ -0.04
GABPB1-201ENST00000220429 BLZF1Q9H2G9 400 aa14.79□□□□□ -0.04
GABPB1-201ENST00000220429 TMEM60Q9H2L4 133 aa14.79□□□□□ -0.04
GABPB1-201ENST00000220429 DLGAP2Q9P1A6 1054 aa14.79□□□□□ -0.04
GABPB1-201ENST00000220429 SWAP70Q9UH65 585 aa14.79□□□□□ -0.04
GABPB1-201ENST00000220429 QSER1Q2KHR3 1735 aa14.79□□□□□ -0.04
GABPB1-201ENST00000220429 PPP1R3GB7ZBB8 358 aa14.79□□□□□ -0.04
GABPB1-201ENST00000220429 F8W031 263 aaPredicted RBP14.79□□□□□ -0.04
GABPB1-201ENST00000220429 NDUFA10O95299 355 aa14.79□□□□□ -0.04
GABPB1-201ENST00000220429 ATP6V1C1P21283 382 aa14.79□□□□□ -0.04
GABPB1-201ENST00000220429 NOVP48745 357 aa14.79□□□□□ -0.04
GABPB1-201ENST00000220429 STX17P56962 302 aa14.79□□□□□ -0.04
GABPB1-201ENST00000220429 MYBPC2Q14324 1141 aa14.79□□□□□ -0.04
GABPB1-201ENST00000220429 FAM133BQ5BKY9 247 aaKnown RBP14.79□□□□□ -0.04
GABPB1-201ENST00000220429 MREGQ8N565 214 aa14.79□□□□□ -0.04
GABPB1-201ENST00000220429 CERS5Q8N5B7 392 aa14.79□□□□□ -0.04
GABPB1-201ENST00000220429 IFT43Q96FT9 208 aa14.79□□□□□ -0.04
GABPB1-201ENST00000220429 FAM81BQ96LP2 452 aa14.79□□□□□ -0.04
GABPB1-201ENST00000220429 TUBGCP4Q9UGJ1 667 aa14.79□□□□□ -0.04
GABPB1-201ENST00000220429 ADAMTSL1Q8N6G6 1762 aa14.79□□□□□ -0.04
GABPB1-201ENST00000220429 SYNRGQ9UMZ2 1314 aa14.79□□□□□ -0.04
GABPB1-201ENST00000220429 ANO9A1A5B4 782 aa14.79□□□□□ -0.04
GABPB1-201ENST00000220429 PFDN1O60925 122 aa14.79□□□□□ -0.04
GABPB1-201ENST00000220429 TMCC1O94876 653 aa14.79□□□□□ -0.04
GABPB1-201ENST00000220429 OR52E8Q6IFG1 317 aa14.79□□□□□ -0.04
GABPB1-201ENST00000220429 SESTD1Q86VW0 696 aa14.79□□□□□ -0.04
GABPB1-201ENST00000220429 SPATA4Q8NEY3 305 aa14.79□□□□□ -0.04
GABPB1-201ENST00000220429 COA1Q9GZY4 146 aa14.79□□□□□ -0.04
GABPB1-201ENST00000220429 RHBDL2Q9NX52 303 aa14.79□□□□□ -0.04
GABPB1-201ENST00000220429 ADAM22Q9P0K1 906 aa14.79□□□□□ -0.04
GABPB1-201ENST00000220429 COL11A2P13942 1736 aaPredicted RBP14.78□□□□□ -0.04
GABPB1-201ENST00000220429 FAM153BP0C7A2 387 aa14.78□□□□□ -0.04
GABPB1-201ENST00000220429 SRGNP10124 158 aa14.78□□□□□ -0.04
GABPB1-201ENST00000220429 IDEP14735 1019 aa14.78□□□□□ -0.04
GABPB1-201ENST00000220429 MATR3P43243 847 aaKnown RBP eCLIP14.78□□□□□ -0.04
GABPB1-201ENST00000220429 ATP11AP98196 1134 aa14.78□□□□□ -0.04
GABPB1-201ENST00000220429 CBX3Q13185 183 aa14.78□□□□□ -0.04
GABPB1-201ENST00000220429 PICALMQ13492 652 aa14.78□□□□□ -0.04
GABPB1-201ENST00000220429 KBTBD12Q3ZCT8 623 aa14.78□□□□□ -0.04
GABPB1-201ENST00000220429 FAM153CQ494X1 144 aa14.78□□□□□ -0.04
GABPB1-201ENST00000220429 CMPK2Q5EBM0 449 aa14.78□□□□□ -0.04
GABPB1-201ENST00000220429 SPATA1Q5VX52 437 aa14.78□□□□□ -0.04
GABPB1-201ENST00000220429 SMCR8Q8TEV9 937 aaPredicted RBP14.78□□□□□ -0.04
GABPB1-201ENST00000220429 CORO1BQ9BR76 489 aa14.78□□□□□ -0.04
GABPB1-201ENST00000220429 ADD3Q9UEY8 706 aaKnown RBP14.78□□□□□ -0.04
GABPB1-201ENST00000220429 FAM153AQ9UHL3 310 aa14.78□□□□□ -0.04
GABPB1-201ENST00000220429 A8MUI8 341 aa14.78□□□□□ -0.04
GABPB1-201ENST00000220429 CEP104O60308 925 aa14.78□□□□□ -0.04
GABPB1-201ENST00000220429 HAUS3Q68CZ6 603 aa14.78□□□□□ -0.04
GABPB1-201ENST00000220429 ZNF572Q7Z3I7 529 aaPredicted RBP14.78□□□□□ -0.04
GABPB1-201ENST00000220429 CREG2Q8IUH2 290 aa14.78□□□□□ -0.04
GABPB1-201ENST00000220429 LZICQ8WZA0 190 aa14.78□□□□□ -0.04
GABPB1-201ENST00000220429 PYM1Q9BRP8 204 aaKnown RBP14.78□□□□□ -0.04
GABPB1-201ENST00000220429 ZMYND12Q9H0C1 365 aa14.78□□□□□ -0.04
GABPB1-201ENST00000220429 VCX3BQ9H321 246 aa14.78□□□□□ -0.04
GABPB1-201ENST00000220429 VCX3AQ9NNX9 186 aa14.78□□□□□ -0.04
GABPB1-201ENST00000220429 AGAP1Q9UPQ3 857 aa14.78□□□□□ -0.04
GABPB1-201ENST00000220429 F8VZ95 297 aa14.77□□□□□ -0.04
GABPB1-201ENST00000220429 GTPBP6O43824 516 aaPredicted RBP14.77□□□□□ -0.04
GABPB1-201ENST00000220429 CCDC92Q53HC0 331 aaPredicted RBP14.77□□□□□ -0.04
GABPB1-201ENST00000220429 CACNA2D4Q7Z3S7 1137 aa14.77□□□□□ -0.04
GABPB1-201ENST00000220429 KCNN1Q92952 543 aa14.77□□□□□ -0.04
GABPB1-201ENST00000220429 MXD3Q9BW11 206 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms