RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 CDC25AP30304 524 aa11.91□□□□□ -0.5
KNOP1-201ENST00000219837 TRMT10CQ7L0Y3 403 aaKnown RBP11.91□□□□□ -0.5
KNOP1-201ENST00000219837 YAF2Q8IY57 180 aa11.91□□□□□ -0.5
KNOP1-201ENST00000219837 SCYL3Q8IZE3 742 aa11.91□□□□□ -0.5
KNOP1-201ENST00000219837 HEG1Q9ULI3 1381 aa11.91□□□□□ -0.5
KNOP1-201ENST00000219837 IQANK1A0A1B0GTG1 560 aa11.91□□□□□ -0.5
KNOP1-201ENST00000219837 TMEM247A6NEH6 219 aa11.91□□□□□ -0.5
KNOP1-201ENST00000219837 PLEKHA8P1O95397 391 aa11.91□□□□□ -0.5
KNOP1-201ENST00000219837 HOXD10P28358 340 aa11.91□□□□□ -0.5
KNOP1-201ENST00000219837 EIF4A3P38919 411 aaKnown RBP11.91□□□□□ -0.5
KNOP1-201ENST00000219837 PHKA2P46019 1235 aa11.91□□□□□ -0.5
KNOP1-201ENST00000219837 APBA1Q02410 837 aa11.91□□□□□ -0.5
KNOP1-201ENST00000219837 IMPG1Q17R60 797 aa11.91□□□□□ -0.5
KNOP1-201ENST00000219837 ZNF699Q32M78 642 aa11.91□□□□□ -0.5
KNOP1-201ENST00000219837 MFSD14CQ5VZR4 134 aa11.91□□□□□ -0.5
KNOP1-201ENST00000219837 NSUN7Q8NE18 718 aaKnown RBP11.91□□□□□ -0.5
KNOP1-201ENST00000219837 SPTLC3Q9NUV7 552 aa11.91□□□□□ -0.5
KNOP1-201ENST00000219837 DNAJC17Q9NVM6 304 aaKnown RBP11.91□□□□□ -0.5
KNOP1-201ENST00000219837 SYNDIG1LA6NDD5 238 aa11.91□□□□□ -0.5
KNOP1-201ENST00000219837 MAP3K7O43318 606 aa11.91□□□□□ -0.5
KNOP1-201ENST00000219837 NME3Q13232 169 aa11.91□□□□□ -0.5
KNOP1-201ENST00000219837 ZNF394Q53GI3 561 aa11.91□□□□□ -0.5
KNOP1-201ENST00000219837 TCP11X2Q5H9J9 407 aa11.91□□□□□ -0.5
KNOP1-201ENST00000219837 SNRNP48Q6IEG0 339 aaKnown RBP11.91□□□□□ -0.5
KNOP1-201ENST00000219837 C11orf57Q6ZUT1 292 aaPredicted RBP11.91□□□□□ -0.5
KNOP1-201ENST00000219837 TMEM179Q6ZVK1 233 aa11.91□□□□□ -0.5
KNOP1-201ENST00000219837 BEST2Q8NFU1 509 aa11.91□□□□□ -0.5
KNOP1-201ENST00000219837 SARS2Q9NP81 518 aaKnown RBP11.91□□□□□ -0.5
KNOP1-201ENST00000219837 PCDHB6Q9Y5E3 794 aa11.91□□□□□ -0.5
KNOP1-201ENST00000219837 ADGRL2O95490 1459 aa11.91□□□□□ -0.5
KNOP1-201ENST00000219837 PRPF4O43172 522 aaKnown RBP eCLIP11.9□□□□□ -0.58e-7■■■■□ 21.2
KNOP1-201ENST00000219837 PKP1Q13835 747 aa11.9□□□□□ -0.5
KNOP1-201ENST00000219837 ZNF568Q3ZCX4 644 aa11.9□□□□□ -0.5
KNOP1-201ENST00000219837 SYNE4Q8N205 404 aa11.9□□□□□ -0.5
KNOP1-201ENST00000219837 TEKT2Q9UIF3 430 aa11.9□□□□□ -0.5
KNOP1-201ENST00000219837 ATP7BP35670 1465 aa11.9□□□□□ -0.5
KNOP1-201ENST00000219837 EXOC1LA0A1B0GW35 172 aa11.9□□□□□ -0.5
KNOP1-201ENST00000219837 ERVV-1B6SEH8 477 aa11.9□□□□□ -0.5
KNOP1-201ENST00000219837 SASH1O94885 1247 aa11.9□□□□□ -0.5
KNOP1-201ENST00000219837 ANP32DO95626 131 aa11.9□□□□□ -0.5
KNOP1-201ENST00000219837 EEF1B2P24534 225 aaKnown RBP11.9□□□□□ -0.5
KNOP1-201ENST00000219837 SLC7A5Q01650 507 aa11.9□□□□□ -0.5
KNOP1-201ENST00000219837 CAPRIN1Q14444 709 aaKnown RBP11.9□□□□□ -0.5
KNOP1-201ENST00000219837 BZW1Q7L1Q6 419 aaKnown RBP11.9□□□□□ -0.5
KNOP1-201ENST00000219837 RASEFQ8IZ41 740 aa11.9□□□□□ -0.5
KNOP1-201ENST00000219837 BCAS4Q8TDM0 211 aa11.9□□□□□ -0.5
KNOP1-201ENST00000219837 CEP19Q96LK0 163 aa11.9□□□□□ -0.5
KNOP1-201ENST00000219837 ZSWIM5Q9P217 1185 aa11.9□□□□□ -0.5
KNOP1-201ENST00000219837 MMP10P09238 476 aa11.9□□□□□ -0.5
KNOP1-201ENST00000219837 TBCCQ15814 346 aa11.9□□□□□ -0.5
KNOP1-201ENST00000219837 MAP4K1Q92918 833 aa11.9□□□□□ -0.5
KNOP1-201ENST00000219837 NEUROG2Q9H2A3 272 aa11.9□□□□□ -0.5
KNOP1-201ENST00000219837 COPRSQ9NQ92 184 aa11.9□□□□□ -0.5
KNOP1-201ENST00000219837 SH3GLB2Q9NR46 395 aa11.9□□□□□ -0.5
KNOP1-201ENST00000219837 HOXC10Q9NYD6 342 aa11.9□□□□□ -0.5
KNOP1-201ENST00000219837 SSTR3P32745 418 aaPredicted RBP11.9□□□□□ -0.5
KNOP1-201ENST00000219837 EPHB4P54760 987 aa11.9□□□□□ -0.5
KNOP1-201ENST00000219837 PYROXD1Q8WU10 500 aa11.9□□□□□ -0.5
KNOP1-201ENST00000219837 ZBTB18Q99592 522 aa11.9□□□□□ -0.5
KNOP1-201ENST00000219837 DRC3Q9H069 523 aa11.9□□□□□ -0.5
KNOP1-201ENST00000219837 RNF181Q9P0P0 153 aa11.9□□□□□ -0.5
KNOP1-201ENST00000219837 AFF4Q9UHB7 1163 aaKnown RBP11.9□□□□□ -0.5
KNOP1-201ENST00000219837 TJP3O95049 919 aa11.9□□□□□ -0.5
KNOP1-201ENST00000219837 LUC7L3O95232 432 aaKnown RBP11.9□□□□□ -0.5
KNOP1-201ENST00000219837 GLE1Q53GS7 698 aaKnown RBP11.9□□□□□ -0.5
KNOP1-201ENST00000219837 ACBD5Q5T8D3 534 aaPredicted RBP11.9□□□□□ -0.5
KNOP1-201ENST00000219837 SLC8A1P32418 973 aa11.89□□□□□ -0.51
KNOP1-201ENST00000219837 LIG3P49916 1009 aa11.89□□□□□ -0.51
KNOP1-201ENST00000219837 ZNF667Q5HYK9 610 aa11.89□□□□□ -0.51
KNOP1-201ENST00000219837 GIPC2Q8TF65 315 aa11.89□□□□□ -0.51
KNOP1-201ENST00000219837 POLR3EQ9NVU0 708 aa11.89□□□□□ -0.51
KNOP1-201ENST00000219837 KLHL8Q9P2G9 620 aaPredicted RBP11.89□□□□□ -0.51
KNOP1-201ENST00000219837 NRBP1Q9UHY1 535 aa11.89□□□□□ -0.51
KNOP1-201ENST00000219837 HUS1O60921 280 aa11.89□□□□□ -0.51
KNOP1-201ENST00000219837 HSPA4LO95757 839 aa11.89□□□□□ -0.51
KNOP1-201ENST00000219837 OCRLQ01968 901 aa11.89□□□□□ -0.51
KNOP1-201ENST00000219837 KIF23Q02241 960 aaPredicted RBP11.89□□□□□ -0.51
KNOP1-201ENST00000219837 CYP27A1Q02318 531 aa11.89□□□□□ -0.51
KNOP1-201ENST00000219837 BBS9Q3SYG4 887 aa11.89□□□□□ -0.51
KNOP1-201ENST00000219837 TAF1BQ53T94 588 aaPredicted RBP11.89□□□□□ -0.51
KNOP1-201ENST00000219837 PPP6R3Q5H9R7 873 aaPredicted RBP11.89□□□□□ -0.51
KNOP1-201ENST00000219837 PLEKHF1Q96S99 279 aa11.89□□□□□ -0.51
KNOP1-201ENST00000219837 SYNDIG1Q9H7V2 258 aa11.89□□□□□ -0.51
KNOP1-201ENST00000219837 THEGQ9P2T0 379 aa11.89□□□□□ -0.51
KNOP1-201ENST00000219837 SCINQ9Y6U3 715 aa11.89□□□□□ -0.51
KNOP1-201ENST00000219837 NEO1Q92859 1461 aa11.89□□□□□ -0.51
KNOP1-201ENST00000219837 ZNF335Q9H4Z2 1342 aaPredicted RBP11.89□□□□□ -0.51
KNOP1-201ENST00000219837 ADORA2BP29275 332 aa11.89□□□□□ -0.51
KNOP1-201ENST00000219837 AP1B1Q10567 949 aa11.89□□□□□ -0.51
KNOP1-201ENST00000219837 CENPUQ71F23 418 aa11.89□□□□□ -0.51
KNOP1-201ENST00000219837 APOBEC3FQ8IUX4 373 aaKnown RBP11.89□□□□□ -0.51
KNOP1-201ENST00000219837 DYDC2Q96IM9 177 aa11.89□□□□□ -0.51
KNOP1-201ENST00000219837 KLC2Q9H0B6 622 aa11.89□□□□□ -0.51
KNOP1-201ENST00000219837 SUFUQ9UMX1 484 aa11.89□□□□□ -0.51
KNOP1-201ENST00000219837 ANKARQ7Z5J8 1434 aa11.89□□□□□ -0.51
KNOP1-201ENST00000219837 CCDC195A0A1B0GUA6 201 aa11.89□□□□□ -0.51
KNOP1-201ENST00000219837 A0A1W2PQ27 194 aa11.89□□□□□ -0.51
KNOP1-201ENST00000219837 A0A1W2PQ64 194 aa11.89□□□□□ -0.51
KNOP1-201ENST00000219837 A0A1W2PQD8 194 aa11.89□□□□□ -0.51
KNOP1-201ENST00000219837 PI4K2BG5E9Z4 385 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms