RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 ASNSP08243 561 aa10.96□□□□□ -0.66
USP11-201ENST00000218348 TRIM14Q14142 442 aa10.96□□□□□ -0.66
USP11-201ENST00000218348 OTUD6BQ8N6M0 293 aa10.96□□□□□ -0.66
USP11-201ENST00000218348 CCDC51Q96ER9 411 aa10.96□□□□□ -0.66
USP11-201ENST00000218348 SMARCAL1Q9NZC9 954 aa10.96□□□□□ -0.66
USP11-201ENST00000218348 DDX41Q9UJV9 622 aaKnown RBP10.96□□□□□ -0.66
USP11-201ENST00000218348 SNCAIPQ9Y6H5 919 aa10.96□□□□□ -0.66
USP11-201ENST00000218348 ZNF263O14978 683 aa10.95□□□□□ -0.66
USP11-201ENST00000218348 FAM13AO94988 1023 aa10.95□□□□□ -0.66
USP11-201ENST00000218348 FOSP01100 380 aaPredicted RBP10.95□□□□□ -0.66
USP11-201ENST00000218348 ATP1A1P05023 1023 aaKnown RBP10.95□□□□□ -0.66
USP11-201ENST00000218348 HTTP42858 3142 aa10.95□□□□□ -0.66
USP11-201ENST00000218348 CYP2J2P51589 502 aa10.95□□□□□ -0.66
USP11-201ENST00000218348 RNASE9P60153 205 aaKnown RBP10.95□□□□□ -0.66
USP11-201ENST00000218348 ZBED6P86452 979 aa10.95□□□□□ -0.66
USP11-201ENST00000218348 GJB7Q6PEY0 223 aa10.95□□□□□ -0.66
USP11-201ENST00000218348 GLT8D2Q9H1C3 349 aa10.95□□□□□ -0.66
USP11-201ENST00000218348 JADE2Q9NQC1 790 aa10.95□□□□□ -0.66
USP11-201ENST00000218348 ARHGAP20Q9P2F6 1191 aa10.95□□□□□ -0.66
USP11-201ENST00000218348 TESPA1A2RU30 521 aaPredicted RBP10.95□□□□□ -0.66
USP11-201ENST00000218348 TISP43B9A030 160 aa10.95□□□□□ -0.66
USP11-201ENST00000218348 RPA1P27694 616 aa10.95□□□□□ -0.66
USP11-201ENST00000218348 CHMP4BP1P59074 171 aa10.95□□□□□ -0.66
USP11-201ENST00000218348 SPA17Q15506 151 aa10.95□□□□□ -0.66
USP11-201ENST00000218348 CEP55Q53EZ4 464 aa10.95□□□□□ -0.66
USP11-201ENST00000218348 CHADLQ6NUI6 762 aa10.95□□□□□ -0.66
USP11-201ENST00000218348 DNAJC7Q99615 494 aa10.95□□□□□ -0.66
USP11-201ENST00000218348 NAPGQ99747 312 aaPredicted RBP10.95□□□□□ -0.66
USP11-201ENST00000218348 UNC45AQ9H3U1 944 aa10.95□□□□□ -0.66
USP11-201ENST00000218348 VAV3Q9UKW4 847 aa10.95□□□□□ -0.66
USP11-201ENST00000218348 IGLV3-22A0A075B6J6 115 aa10.94□□□□□ -0.66
USP11-201ENST00000218348 A0A1W2PQC6 194 aa10.94□□□□□ -0.66
USP11-201ENST00000218348 IPO5O00410 1097 aaKnown RBP10.94□□□□□ -0.66
USP11-201ENST00000218348 SLITRK3O94933 977 aa10.94□□□□□ -0.66
USP11-201ENST00000218348 MOCS3O95396 460 aa10.94□□□□□ -0.66
USP11-201ENST00000218348 SLC9A1P19634 815 aa10.94□□□□□ -0.66
USP11-201ENST00000218348 KCNMA1Q12791 1236 aa10.94□□□□□ -0.66
USP11-201ENST00000218348 ORC2Q13416 577 aaPredicted RBP10.94□□□□□ -0.66
USP11-201ENST00000218348 FAM133AQ8N9E0 248 aa10.94□□□□□ -0.66
USP11-201ENST00000218348 RBM46Q8TBY0 533 aaKnown RBP10.94□□□□□ -0.66
USP11-201ENST00000218348 ELMO3Q96BJ8 720 aa10.94□□□□□ -0.66
USP11-201ENST00000218348 LRRC27Q9C0I9 530 aa10.94□□□□□ -0.66
USP11-201ENST00000218348 SUGCTQ9HAC7 445 aa10.94□□□□□ -0.66
USP11-201ENST00000218348 MRPL11Q9Y3B7 192 aaKnown RBP10.94□□□□□ -0.66
USP11-201ENST00000218348 RBBP6Q7Z6E9 1792 aaKnown RBP10.94□□□□□ -0.66
USP11-201ENST00000218348 RBAK-RBAKDNI3L0D1 243 aa10.94□□□□□ -0.66
USP11-201ENST00000218348 ITGB5P18084 799 aa10.94□□□□□ -0.66
USP11-201ENST00000218348 CYLC1P35663 651 aaPredicted RBP10.94□□□□□ -0.66
USP11-201ENST00000218348 LRRC63Q05C16 580 aa10.94□□□□□ -0.66
USP11-201ENST00000218348 OTOP1Q7RTM1 612 aa10.94□□□□□ -0.66
USP11-201ENST00000218348 KRT222Q8N1A0 295 aa10.94□□□□□ -0.66
USP11-201ENST00000218348 CRYGNQ8WXF5 182 aa10.94□□□□□ -0.66
USP11-201ENST00000218348 TAAR1Q96RJ0 339 aa10.94□□□□□ -0.66
USP11-201ENST00000218348 PARD6BQ9BYG5 372 aa10.94□□□□□ -0.66
USP11-201ENST00000218348 PCIF1Q9H4Z3 704 aa10.94□□□□□ -0.66
USP11-201ENST00000218348 EHD2Q9NZN4 543 aa10.94□□□□□ -0.66
USP11-201ENST00000218348 SIK3Q9Y2K2 1263 aa10.94□□□□□ -0.66
USP11-201ENST00000218348 LCTP09848 1927 aa10.94□□□□□ -0.66
USP11-201ENST00000218348 CYP3A7-CYP3A51PA0A087WV96 503 aa10.94□□□□□ -0.66
USP11-201ENST00000218348 UNCXA6NJT0 531 aa10.94□□□□□ -0.66
USP11-201ENST00000218348 CETN3O15182 167 aa10.94□□□□□ -0.66
USP11-201ENST00000218348 POLR3GO15318 223 aaPredicted RBP10.94□□□□□ -0.66
USP11-201ENST00000218348 NCK2O43639 380 aa10.94□□□□□ -0.66
USP11-201ENST00000218348 CAND2O75155 1236 aa10.94□□□□□ -0.66
USP11-201ENST00000218348 CYP3A7P24462 503 aa10.94□□□□□ -0.66
USP11-201ENST00000218348 GJA5P36382 358 aa10.94□□□□□ -0.66
USP11-201ENST00000218348 SETQ01105 290 aaPredicted RBP10.94□□□□□ -0.66
USP11-201ENST00000218348 RINT1Q6NUQ1 792 aa10.94□□□□□ -0.66
USP11-201ENST00000218348 BTNL9Q6UXG8 535 aa10.94□□□□□ -0.66
USP11-201ENST00000218348 NOA1Q8NC60 698 aaKnown RBP10.94□□□□□ -0.66
USP11-201ENST00000218348 CAGE1Q8TC20 777 aa10.94□□□□□ -0.66
USP11-201ENST00000218348 DCPSQ96C86 337 aaKnown RBP10.94□□□□□ -0.66
USP11-201ENST00000218348 WRNIP1Q96S55 665 aa10.94□□□□□ -0.66
USP11-201ENST00000218348 IFIH1Q9BYX4 1025 aaKnown RBP10.94□□□□□ -0.66
USP11-201ENST00000218348 TTYH3Q9C0H2 523 aa10.94□□□□□ -0.66
USP11-201ENST00000218348 RIPK3Q9Y572 518 aa10.94□□□□□ -0.66
USP11-201ENST00000218348 FGFR1OPO95684 399 aaKnown RBP10.93□□□□□ -0.66
USP11-201ENST00000218348 HOXD13P35453 343 aa10.93□□□□□ -0.66
USP11-201ENST00000218348 KIF11P52732 1056 aa10.93□□□□□ -0.66
USP11-201ENST00000218348 HMGCS2P54868 508 aa10.93□□□□□ -0.66
USP11-201ENST00000218348 EHHADHQ08426 723 aa10.93□□□□□ -0.66
USP11-201ENST00000218348 KCNH2Q12809 1159 aa10.93□□□□□ -0.66
USP11-201ENST00000218348 SYT2Q8N9I0 419 aaPredicted RBP10.93□□□□□ -0.66
USP11-201ENST00000218348 ATG4CQ96DT6 458 aa10.93□□□□□ -0.66
USP11-201ENST00000218348 LXNQ9BS40 222 aa10.93□□□□□ -0.66
USP11-201ENST00000218348 RPAP3Q9H6T3 665 aaPredicted RBP10.93□□□□□ -0.66
USP11-201ENST00000218348 TCEAL9Q9UHQ7 104 aa10.93□□□□□ -0.66
USP11-201ENST00000218348 PCDHA2Q9Y5H9 948 aa10.93□□□□□ -0.66
USP11-201ENST00000218348 AKAP3O75969 853 aa10.93□□□□□ -0.66
USP11-201ENST00000218348 SOX10P56693 466 aa10.93□□□□□ -0.66
USP11-201ENST00000218348 Q4G0T1 1027 aa10.93□□□□□ -0.66
USP11-201ENST00000218348 ODR4Q5SWX8 454 aa10.93□□□□□ -0.66
USP11-201ENST00000218348 TMCO3Q6UWJ1 677 aa10.93□□□□□ -0.66
USP11-201ENST00000218348 MOB2Q70IA6 237 aa10.93□□□□□ -0.66
USP11-201ENST00000218348 FAM20AQ96MK3 541 aa10.93□□□□□ -0.66
USP11-201ENST00000218348 CCDC43Q96MW1 224 aaKnown RBP10.93□□□□□ -0.66
USP11-201ENST00000218348 GOLPH3Q9H4A6 298 aa10.93□□□□□ -0.66
USP11-201ENST00000218348 CDC23Q9UJX2 597 aa10.93□□□□□ -0.66
USP11-201ENST00000218348 SYNPO2Q9UMS6 1093 aa10.93□□□□□ -0.66
USP11-201ENST00000218348 TELO2Q9Y4R8 837 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms