RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 TRAPPC12Q8WVT3 735 aa30.4■■■□□ 2.46
CHMP4B-201ENST00000217402 LARP4BQ92615 738 aaKnown RBP30.4■■■□□ 2.46
CHMP4B-201ENST00000217402 CEP170P1Q96L14 293 aa30.4■■■□□ 2.46
CHMP4B-201ENST00000217402 PYM1Q9BRP8 204 aaKnown RBP30.4■■■□□ 2.46
CHMP4B-201ENST00000217402 ANKEF1Q9NU02 776 aa30.4■■■□□ 2.46
CHMP4B-201ENST00000217402 SCN10AQ9Y5Y9 1956 aa30.39■■■□□ 2.46
CHMP4B-201ENST00000217402 ZNF202O95125 648 aa30.39■■■□□ 2.46
CHMP4B-201ENST00000217402 RARRES1P49788 294 aa30.39■■■□□ 2.46
CHMP4B-201ENST00000217402 SNW1Q13573 536 aaKnown RBP30.39■■■□□ 2.46
CHMP4B-201ENST00000217402 MCM6Q14566 821 aa30.39■■■□□ 2.46
CHMP4B-201ENST00000217402 FAM47CQ5HY64 1035 aa30.39■■■□□ 2.46
CHMP4B-201ENST00000217402 KCTD17Q8N5Z5 321 aa30.39■■■□□ 2.46
CHMP4B-201ENST00000217402 ENGASEQ8NFI3 743 aa30.39■■■□□ 2.46
CHMP4B-201ENST00000217402 NIFKQ9BYG3 293 aaKnown RBP30.39■■■□□ 2.46
CHMP4B-201ENST00000217402 SERTAD1Q9UHV2 236 aa30.39■■■□□ 2.46
CHMP4B-201ENST00000217402 DBR1Q9UK59 544 aaKnown RBP30.39■■■□□ 2.46
CHMP4B-201ENST00000217402 ARHGEF35A5YM69 484 aa30.38■■■□□ 2.45
CHMP4B-201ENST00000217402 PLA2G4BP0C869 781 aa30.38■■■□□ 2.45
CHMP4B-201ENST00000217402 LONRF3Q496Y0 759 aa30.38■■■□□ 2.45
CHMP4B-201ENST00000217402 ANKLE1Q8NAG6 615 aa30.38■■■□□ 2.45
CHMP4B-201ENST00000217402 ABHD8Q96I13 439 aa30.38■■■□□ 2.45
CHMP4B-201ENST00000217402 CYP26B1Q9NR63 512 aa30.38■■■□□ 2.45
CHMP4B-201ENST00000217402 HDAC6Q9UBN7 1215 aa30.38■■■□□ 2.45
CHMP4B-201ENST00000217402 GRIN2DO15399 1336 aa30.37■■■□□ 2.45
CHMP4B-201ENST00000217402 ZBTB42B2RXF5 422 aa30.37■■■□□ 2.45
CHMP4B-201ENST00000217402 XRCC6P12956 609 aaKnown RBP eCLIP30.37■■■□□ 2.452e-6■□□□□ 9.4
CHMP4B-201ENST00000217402 ITGA7Q13683 1181 aa30.37■■■□□ 2.45
CHMP4B-201ENST00000217402 GRIK4Q16099 956 aa30.37■■■□□ 2.45
CHMP4B-201ENST00000217402 SENP6Q9GZR1 1112 aaPredicted RBP30.37■■■□□ 2.45
CHMP4B-201ENST00000217402 BMP2KQ9NSY1 1161 aaPredicted RBP30.37■■■□□ 2.45
CHMP4B-201ENST00000217402 SETD4Q9NVD3 440 aa30.37■■■□□ 2.45
CHMP4B-201ENST00000217402 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP30.36■■■□□ 2.45
CHMP4B-201ENST00000217402 ACTN4O43707 911 aaKnown RBP30.36■■■□□ 2.45
CHMP4B-201ENST00000217402 CEP57L1Q8IYX8 460 aa30.36■■■□□ 2.45
CHMP4B-201ENST00000217402 EN2P19622 333 aaPredicted RBP30.36■■■□□ 2.45
CHMP4B-201ENST00000217402 GPT2Q8TD30 523 aa30.36■■■□□ 2.45
CHMP4B-201ENST00000217402 LMBR1Q8WVP7 490 aa30.36■■■□□ 2.45
CHMP4B-201ENST00000217402 STAMQ92783 540 aa30.36■■■□□ 2.45
CHMP4B-201ENST00000217402 DACT1Q9NYF0 836 aa30.36■■■□□ 2.45
CHMP4B-201ENST00000217402 A0A0U1RQG5 324 aaPredicted RBP30.35■■■□□ 2.45
CHMP4B-201ENST00000217402 USO1O60763 962 aaKnown RBP30.35■■■□□ 2.45
CHMP4B-201ENST00000217402 SLC12A3P55017 1021 aa30.35■■■□□ 2.45
CHMP4B-201ENST00000217402 TARBP2Q15633 366 aaKnown RBP30.35■■■□□ 2.45
CHMP4B-201ENST00000217402 ZNF484Q5JVG2 852 aa30.35■■■□□ 2.45
CHMP4B-201ENST00000217402 SYT2Q8N9I0 419 aaPredicted RBP30.35■■■□□ 2.45
CHMP4B-201ENST00000217402 ZBTB10Q96DT7 871 aa30.35■■■□□ 2.45
CHMP4B-201ENST00000217402 CUEDC2Q9H467 287 aa30.35■■■□□ 2.45
CHMP4B-201ENST00000217402 NRCAMQ92823 1304 aa30.34■■■□□ 2.45
CHMP4B-201ENST00000217402 SLFN14P0C7P3 912 aa30.34■■■□□ 2.45
CHMP4B-201ENST00000217402 PADI6Q6TGC4 694 aa30.34■■■□□ 2.45
CHMP4B-201ENST00000217402 KRBA2Q6ZNG9 492 aa30.34■■■□□ 2.45
CHMP4B-201ENST00000217402 SV2BQ7L1I2 683 aa30.34■■■□□ 2.45
CHMP4B-201ENST00000217402 CNNM3Q8NE01 707 aa30.34■■■□□ 2.45
CHMP4B-201ENST00000217402 PAWRQ96IZ0 340 aaKnown RBP30.34■■■□□ 2.45
CHMP4B-201ENST00000217402 COL1A2P08123 1366 aa30.34■■■□□ 2.45
CHMP4B-201ENST00000217402 ARID2Q68CP9 1835 aa30.34■■■□□ 2.45
CHMP4B-201ENST00000217402 C17orf102A2RUQ5 167 aa30.33■■■□□ 2.45
CHMP4B-201ENST00000217402 KINO60870 393 aaKnown RBP30.33■■■□□ 2.45
CHMP4B-201ENST00000217402 HIC1Q14526 733 aa30.33■■■□□ 2.45
CHMP4B-201ENST00000217402 NFKBIBQ15653 356 aa30.33■■■□□ 2.45
CHMP4B-201ENST00000217402 NFRKBQ6P4R8 1299 aa30.33■■■□□ 2.45
CHMP4B-201ENST00000217402 GPBP1Q86WP2 473 aa30.33■■■□□ 2.45
CHMP4B-201ENST00000217402 GRAMD1CQ8IYS0 662 aa30.33■■■□□ 2.45
CHMP4B-201ENST00000217402 RUSC1Q9BVN2 902 aa30.33■■■□□ 2.45
CHMP4B-201ENST00000217402 USP25Q9UHP3 1055 aa30.33■■■□□ 2.45
CHMP4B-201ENST00000217402 POLGP54098 1239 aaPredicted RBP30.33■■■□□ 2.45
CHMP4B-201ENST00000217402 TBC1D8BQ0IIM8 1120 aa30.33■■■□□ 2.45
CHMP4B-201ENST00000217402 TNS4Q8IZW8 715 aa30.33■■■□□ 2.45
CHMP4B-201ENST00000217402 CEP89Q96ST8 783 aa30.33■■■□□ 2.45
CHMP4B-201ENST00000217402 GTF2IRD1Q9UHL9 959 aa30.33■■■□□ 2.45
CHMP4B-201ENST00000217402 COL6A1P12109 1028 aa30.32■■■□□ 2.44
CHMP4B-201ENST00000217402 CAPN2P17655 700 aa30.32■■■□□ 2.44
CHMP4B-201ENST00000217402 AFMP43652 599 aa30.32■■■□□ 2.44
CHMP4B-201ENST00000217402 ATN1P54259 1190 aaPredicted RBP30.32■■■□□ 2.44
CHMP4B-201ENST00000217402 ZNF200P98182 395 aaPredicted RBP30.32■■■□□ 2.44
CHMP4B-201ENST00000217402 C11orf49Q9H6J7 331 aa30.32■■■□□ 2.44
CHMP4B-201ENST00000217402 RRN3P2A6NIE6 340 aa30.31■■■□□ 2.44
CHMP4B-201ENST00000217402 RAD51AP2Q09MP3 1159 aa30.31■■■□□ 2.44
CHMP4B-201ENST00000217402 MARCH8Q5T0T0 291 aa30.31■■■□□ 2.44
CHMP4B-201ENST00000217402 GDF6Q6KF10 455 aaPredicted RBP30.31■■■□□ 2.44
CHMP4B-201ENST00000217402 RINT1Q6NUQ1 792 aa30.31■■■□□ 2.44
CHMP4B-201ENST00000217402 MTRQ99707 1265 aa30.31■■■□□ 2.44
CHMP4B-201ENST00000217402 TNMDQ9H2S6 317 aa30.31■■■□□ 2.44
CHMP4B-201ENST00000217402 MAGEF1Q9HAY2 307 aa30.31■■■□□ 2.44
CHMP4B-201ENST00000217402 KBTBD4Q9NVX7 518 aa30.31■■■□□ 2.44
CHMP4B-201ENST00000217402 TUBE1Q9UJT0 475 aa30.31■■■□□ 2.44
CHMP4B-201ENST00000217402 LOXHD1Q8IVV2 1947 aa30.3■■■□□ 2.44
CHMP4B-201ENST00000217402 C22orf31O95567 290 aa30.3■■■□□ 2.44
CHMP4B-201ENST00000217402 MBD3O95983 291 aa30.3■■■□□ 2.44
CHMP4B-201ENST00000217402 KLRC1P26715 233 aa30.3■■■□□ 2.44
CHMP4B-201ENST00000217402 MAEAQ7L5Y9 396 aa30.3■■■□□ 2.44
CHMP4B-201ENST00000217402 SESTD1Q86VW0 696 aa30.3■■■□□ 2.44
CHMP4B-201ENST00000217402 SLC7A3Q8WY07 619 aa30.3■■■□□ 2.44
CHMP4B-201ENST00000217402 PAGE5Q96GU1 130 aa30.3■■■□□ 2.44
CHMP4B-201ENST00000217402 NPHP3-ACAD11A0A0J9YXS1 232 aa30.29■■■□□ 2.44
CHMP4B-201ENST00000217402 ARVCFO00192 962 aa30.29■■■□□ 2.44
CHMP4B-201ENST00000217402 DGAT1O75907 488 aa30.29■■■□□ 2.44
CHMP4B-201ENST00000217402 CYP11B2P19099 503 aa30.29■■■□□ 2.44
CHMP4B-201ENST00000217402 PTMSP20962 102 aa30.29■■■□□ 2.44
CHMP4B-201ENST00000217402 HOXC8P31273 242 aa30.29■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms