RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 ATP8A1Q9Y2Q0 1164 aa13.42□□□□□ -0.26
TM9SF4-201ENST00000217315 A0A087X0T9 212 aa13.42□□□□□ -0.26
TM9SF4-201ENST00000217315 FAM228BP0C875 321 aa13.42□□□□□ -0.26
TM9SF4-201ENST00000217315 CCNI2Q6ZMN8 369 aaPredicted RBP13.42□□□□□ -0.26
TM9SF4-201ENST00000217315 CCDC77Q9BR77 488 aa13.42□□□□□ -0.26
TM9SF4-201ENST00000217315 HERC5Q9UII4 1024 aaKnown RBP13.42□□□□□ -0.26
TM9SF4-201ENST00000217315 ADAMTSL3P82987 1691 aa13.41□□□□□ -0.26
TM9SF4-201ENST00000217315 ECE1P42892 770 aa13.41□□□□□ -0.26
TM9SF4-201ENST00000217315 PDE6CP51160 858 aa13.41□□□□□ -0.26
TM9SF4-201ENST00000217315 PLTPP55058 493 aa13.41□□□□□ -0.26
TM9SF4-201ENST00000217315 APBA1Q02410 837 aa13.41□□□□□ -0.26
TM9SF4-201ENST00000217315 EDRF1Q3B7T1 1238 aa13.41□□□□□ -0.26
TM9SF4-201ENST00000217315 DENND2CQ68D51 928 aa13.41□□□□□ -0.26
TM9SF4-201ENST00000217315 PRMT6Q96LA8 375 aaPredicted RBP13.41□□□□□ -0.26
TM9SF4-201ENST00000217315 RBM12Q9NTZ6 932 aaKnown RBP13.41□□□□□ -0.26
TM9SF4-201ENST00000217315 PTPN22Q9Y2R2 807 aa13.41□□□□□ -0.26
TM9SF4-201ENST00000217315 RRP15Q9Y3B9 282 aaKnown RBP13.41□□□□□ -0.26
TM9SF4-201ENST00000217315 LRRIQ4A6NIV6 560 aa13.41□□□□□ -0.26
TM9SF4-201ENST00000217315 ECM2O94769 699 aaPredicted RBP13.41□□□□□ -0.26
TM9SF4-201ENST00000217315 FIGNQ5HY92 759 aa13.41□□□□□ -0.26
TM9SF4-201ENST00000217315 ZNF746Q6NUN9 644 aaPredicted RBP13.41□□□□□ -0.26
TM9SF4-201ENST00000217315 COL23A1Q86Y22 540 aaPredicted RBP13.41□□□□□ -0.26
TM9SF4-201ENST00000217315 ACER1Q8TDN7 264 aa13.41□□□□□ -0.26
TM9SF4-201ENST00000217315 NT5C1BQ96P26 610 aa13.41□□□□□ -0.26
TM9SF4-201ENST00000217315 STMN4Q9H169 189 aaPredicted RBP13.41□□□□□ -0.26
TM9SF4-201ENST00000217315 KMT5AQ9NQR1 393 aa13.41□□□□□ -0.26
TM9SF4-201ENST00000217315 C1orf112Q9NSG2 853 aa13.41□□□□□ -0.26
TM9SF4-201ENST00000217315 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.41□□□□□ -0.26
TM9SF4-201ENST00000217315 DAAM1Q9Y4D1 1078 aa13.41□□□□□ -0.26
TM9SF4-201ENST00000217315 TARSL2A2RTX5 802 aaKnown RBP13.41□□□□□ -0.26
TM9SF4-201ENST00000217315 POLRMTO00411 1230 aaKnown RBP13.41□□□□□ -0.26
TM9SF4-201ENST00000217315 PBX1P40424 430 aa13.41□□□□□ -0.26
TM9SF4-201ENST00000217315 PSMC6P62333 389 aa13.41□□□□□ -0.26
TM9SF4-201ENST00000217315 DHX9Q08211 1270 aaKnown RBP13.41□□□□□ -0.26
TM9SF4-201ENST00000217315 MTMR1Q13613 665 aa13.41□□□□□ -0.26
TM9SF4-201ENST00000217315 PHLDB2Q86SQ0 1253 aa13.41□□□□□ -0.26
TM9SF4-201ENST00000217315 CERS5Q8N5B7 392 aa13.41□□□□□ -0.26
TM9SF4-201ENST00000217315 CYP2W1Q8TAV3 490 aa13.41□□□□□ -0.26
TM9SF4-201ENST00000217315 DEPTORQ8TB45 409 aa13.41□□□□□ -0.26
TM9SF4-201ENST00000217315 HNRNPLLQ8WVV9 542 aaKnown RBP13.41□□□□□ -0.26
TM9SF4-201ENST00000217315 ZNF653Q96CK0 615 aa13.41□□□□□ -0.26
TM9SF4-201ENST00000217315 CABS1Q96KC9 395 aa13.41□□□□□ -0.26
TM9SF4-201ENST00000217315 FBXO28Q9NVF7 368 aa13.41□□□□□ -0.26
TM9SF4-201ENST00000217315 CEP83Q9Y592 693 aa13.41□□□□□ -0.26
TM9SF4-201ENST00000217315 NID2Q14112 1375 aa13.4□□□□□ -0.26
TM9SF4-201ENST00000217315 PTK2Q05397 1052 aa13.4□□□□□ -0.26
TM9SF4-201ENST00000217315 MSANTD4Q8NCY6 345 aa13.4□□□□□ -0.26
TM9SF4-201ENST00000217315 SCFD1Q8WVM8 642 aa13.4□□□□□ -0.26
TM9SF4-201ENST00000217315 ZDHHC15Q96MV8 337 aa13.4□□□□□ -0.26
TM9SF4-201ENST00000217315 MTMR9Q96QG7 549 aa13.4□□□□□ -0.26
TM9SF4-201ENST00000217315 PODXL2Q9NZ53 605 aa13.4□□□□□ -0.26
TM9SF4-201ENST00000217315 SEPT9Q9UHD8 586 aaPredicted RBP13.4□□□□□ -0.26
TM9SF4-201ENST00000217315 TBX3O15119 743 aa13.4□□□□□ -0.26
TM9SF4-201ENST00000217315 SLC16A4O15374 487 aa13.4□□□□□ -0.26
TM9SF4-201ENST00000217315 MSH4O15457 936 aa13.4□□□□□ -0.26
TM9SF4-201ENST00000217315 DESP17661 470 aa13.4□□□□□ -0.26
TM9SF4-201ENST00000217315 GNPTABQ3T906 1256 aa13.4□□□□□ -0.26
TM9SF4-201ENST00000217315 LIN9Q5TKA1 542 aa13.4□□□□□ -0.26
TM9SF4-201ENST00000217315 PROCA1Q8NCQ7 364 aaPredicted RBP13.4□□□□□ -0.26
TM9SF4-201ENST00000217315 MRRFQ96E11 262 aaKnown RBP13.4□□□□□ -0.26
TM9SF4-201ENST00000217315 RMDN3Q96TC7 470 aa13.4□□□□□ -0.26
TM9SF4-201ENST00000217315 MMTAG2Q9BU76 263 aaKnown RBP13.4□□□□□ -0.26
TM9SF4-201ENST00000217315 LIG3P49916 1009 aa13.4□□□□□ -0.26
TM9SF4-201ENST00000217315 PDCLQ13371 301 aa13.4□□□□□ -0.26
TM9SF4-201ENST00000217315 ZNF211Q13398 564 aaPredicted RBP13.4□□□□□ -0.26
TM9SF4-201ENST00000217315 GLE1Q53GS7 698 aaKnown RBP13.4□□□□□ -0.26
TM9SF4-201ENST00000217315 ALS2CLQ60I27 953 aa13.4□□□□□ -0.26
TM9SF4-201ENST00000217315 APOBEC3HQ6NTF7 200 aaKnown RBP13.4□□□□□ -0.26
TM9SF4-201ENST00000217315 WDR59Q6PJI9 974 aa13.4□□□□□ -0.26
TM9SF4-201ENST00000217315 ZNF507Q8TCN5 953 aa13.4□□□□□ -0.26
TM9SF4-201ENST00000217315 ANKFY1Q9P2R3 1169 aa13.4□□□□□ -0.26
TM9SF4-201ENST00000217315 GAKO14976 1311 aa13.39□□□□□ -0.27
TM9SF4-201ENST00000217315 PITPNM2Q9BZ72 1349 aa13.39□□□□□ -0.27
TM9SF4-201ENST00000217315 MFAP3P55082 362 aa13.39□□□□□ -0.27
TM9SF4-201ENST00000217315 PPP2R5EQ16537 467 aa13.39□□□□□ -0.27
TM9SF4-201ENST00000217315 PAPD7Q5XG87 772 aaKnown RBP13.39□□□□□ -0.27
TM9SF4-201ENST00000217315 GJB7Q6PEY0 223 aa13.39□□□□□ -0.27
TM9SF4-201ENST00000217315 ANKS4BQ8N8V4 417 aa13.39□□□□□ -0.27
TM9SF4-201ENST00000217315 DMGDHQ9UI17 866 aaKnown RBP13.39□□□□□ -0.27
TM9SF4-201ENST00000217315 MYH2Q9UKX2 1941 aa13.39□□□□□ -0.27
TM9SF4-201ENST00000217315 HGSO14964 777 aaPredicted RBP13.39□□□□□ -0.27
TM9SF4-201ENST00000217315 HIP1RO75146 1068 aa13.39□□□□□ -0.27
TM9SF4-201ENST00000217315 CASP4P49662 377 aa13.39□□□□□ -0.27
TM9SF4-201ENST00000217315 POLGP54098 1239 aaPredicted RBP13.39□□□□□ -0.27
TM9SF4-201ENST00000217315 DCUN1D2Q6PH85 259 aa13.39□□□□□ -0.27
TM9SF4-201ENST00000217315 DNAAF5Q86Y56 855 aa13.39□□□□□ -0.27
TM9SF4-201ENST00000217315 XXYLT1Q8NBI6 393 aa13.39□□□□□ -0.27
TM9SF4-201ENST00000217315 TRPM3Q9HCF6 1732 aaPredicted RBP13.39□□□□□ -0.27
TM9SF4-201ENST00000217315 H3BQF6 201 aa13.39□□□□□ -0.27
TM9SF4-201ENST00000217315 EPHB6O15197 1021 aa13.39□□□□□ -0.27
TM9SF4-201ENST00000217315 RGS16O15492 202 aaPredicted RBP13.39□□□□□ -0.27
TM9SF4-201ENST00000217315 ENTPD3O75355 529 aa13.39□□□□□ -0.27
TM9SF4-201ENST00000217315 ZRANB2O95218 330 aaKnown RBP eCLIP13.39□□□□□ -0.27
TM9SF4-201ENST00000217315 CD19P15391 556 aa13.39□□□□□ -0.27
TM9SF4-201ENST00000217315 HOXA10P31260 410 aaPredicted RBP13.39□□□□□ -0.27
TM9SF4-201ENST00000217315 TRPC3Q13507 836 aa13.39□□□□□ -0.27
TM9SF4-201ENST00000217315 INTS8Q75QN2 995 aaKnown RBP13.39□□□□□ -0.27
TM9SF4-201ENST00000217315 RTKN2Q8IZC4 609 aa13.39□□□□□ -0.27
TM9SF4-201ENST00000217315 ANKRD35Q8N283 1001 aa13.39□□□□□ -0.27
TM9SF4-201ENST00000217315 SYT2Q8N9I0 419 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms