RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 PSMD2Q13200 908 aa17.31■□□□□ 0.36
SNAPC1-201ENST00000216294 MKRN4PQ13434 485 aaPredicted RBP17.31■□□□□ 0.36
SNAPC1-201ENST00000216294 CDC37Q16543 378 aaPredicted RBP17.31■□□□□ 0.36
SNAPC1-201ENST00000216294 PPP4R3AQ6IN85 833 aa17.31■□□□□ 0.36
SNAPC1-201ENST00000216294 DPY19L2P1Q6NXN4 242 aa17.31■□□□□ 0.36
SNAPC1-201ENST00000216294 CCDC65Q8IXS2 484 aa17.31■□□□□ 0.36
SNAPC1-201ENST00000216294 PCDHA1Q9Y5I3 950 aa17.31■□□□□ 0.36
SNAPC1-201ENST00000216294 CAPN7Q9Y6W3 813 aa17.31■□□□□ 0.36
SNAPC1-201ENST00000216294 SEMA3FQ13275 785 aa17.31■□□□□ 0.36
SNAPC1-201ENST00000216294 METTL13Q8N6R0 699 aa17.31■□□□□ 0.36
SNAPC1-201ENST00000216294 TTLL6Q8N841 843 aa17.31■□□□□ 0.36
SNAPC1-201ENST00000216294 PIGOQ8TEQ8 1089 aa17.31■□□□□ 0.36
SNAPC1-201ENST00000216294 PRMT6Q96LA8 375 aaPredicted RBP17.31■□□□□ 0.36
SNAPC1-201ENST00000216294 DHX36Q9H2U1 1008 aaKnown RBP17.31■□□□□ 0.36
SNAPC1-201ENST00000216294 RGL1Q9NZL6 768 aa17.31■□□□□ 0.36
SNAPC1-201ENST00000216294 PI4KBQ9UBF8 816 aa17.31■□□□□ 0.36
SNAPC1-201ENST00000216294 SIPA1L1O43166 1804 aa17.31■□□□□ 0.36
SNAPC1-201ENST00000216294 DAPK3O43293 454 aa17.3■□□□□ 0.36
SNAPC1-201ENST00000216294 RAD17O75943 681 aa17.3■□□□□ 0.36
SNAPC1-201ENST00000216294 GDF11O95390 407 aa17.3■□□□□ 0.36
SNAPC1-201ENST00000216294 ABCB4P21439 1286 aa17.3■□□□□ 0.36
SNAPC1-201ENST00000216294 PON1P27169 355 aa17.3■□□□□ 0.36
SNAPC1-201ENST00000216294 HSD17B3P37058 310 aa17.3■□□□□ 0.36
SNAPC1-201ENST00000216294 COG2Q14746 738 aa17.3■□□□□ 0.36
SNAPC1-201ENST00000216294 CERKLQ49MI3 558 aaPredicted RBP17.3■□□□□ 0.36
SNAPC1-201ENST00000216294 SAMD1Q6SPF0 538 aaPredicted RBP17.3■□□□□ 0.36
SNAPC1-201ENST00000216294 SUPT20HQ8NEM7 779 aa17.3■□□□□ 0.36
SNAPC1-201ENST00000216294 ZNF277Q9NRM2 450 aaPredicted RBP17.3■□□□□ 0.36
SNAPC1-201ENST00000216294 ZBTB5O15062 677 aa17.3■□□□□ 0.36
SNAPC1-201ENST00000216294 GFPT2O94808 682 aa17.3■□□□□ 0.36
SNAPC1-201ENST00000216294 KIF4AO95239 1232 aa17.3■□□□□ 0.36
SNAPC1-201ENST00000216294 DPEP1P16444 411 aa17.3■□□□□ 0.36
SNAPC1-201ENST00000216294 INPP5BP32019 993 aa17.3■□□□□ 0.36
SNAPC1-201ENST00000216294 SLC12A3P55017 1021 aa17.3■□□□□ 0.36
SNAPC1-201ENST00000216294 ZC2HC1CQ53FD0 456 aaPredicted RBP17.3■□□□□ 0.36
SNAPC1-201ENST00000216294 RNF187Q5TA31 235 aaPredicted RBP17.3■□□□□ 0.36
SNAPC1-201ENST00000216294 ICE2Q659A1 982 aa17.3■□□□□ 0.36
SNAPC1-201ENST00000216294 AADACL2Q6P093 401 aa17.3■□□□□ 0.36
SNAPC1-201ENST00000216294 ALKBH5Q6P6C2 394 aaKnown RBP17.3■□□□□ 0.36
SNAPC1-201ENST00000216294 KCNV1Q6PIU1 500 aa17.3■□□□□ 0.36
SNAPC1-201ENST00000216294 TAF4BQ92750 862 aa17.3■□□□□ 0.36
SNAPC1-201ENST00000216294 NAGPAQ9UK23 515 aa17.3■□□□□ 0.36
SNAPC1-201ENST00000216294 E7EVH7 732 aa17.29■□□□□ 0.36
SNAPC1-201ENST00000216294 CETN3O15182 167 aa17.29■□□□□ 0.36
SNAPC1-201ENST00000216294 TTI1O43156 1089 aa17.29■□□□□ 0.36
SNAPC1-201ENST00000216294 LRRN2O75325 713 aa17.29■□□□□ 0.36
SNAPC1-201ENST00000216294 EPB41P11171 864 aaKnown RBP17.29■□□□□ 0.36
SNAPC1-201ENST00000216294 EEF2P13639 858 aaKnown RBP17.29■□□□□ 0.36
SNAPC1-201ENST00000216294 BAG6P46379 1132 aa17.29■□□□□ 0.36
SNAPC1-201ENST00000216294 GTF2A1P52655 376 aaPredicted RBP17.29■□□□□ 0.36
SNAPC1-201ENST00000216294 UBXN2AP68543 259 aa17.29■□□□□ 0.36
SNAPC1-201ENST00000216294 SF3B2Q13435 895 aaKnown RBP17.29■□□□□ 0.36
SNAPC1-201ENST00000216294 GIT2Q14161 759 aa17.29■□□□□ 0.36
SNAPC1-201ENST00000216294 UBAP2Q5T6F2 1119 aaKnown RBP17.29■□□□□ 0.36
SNAPC1-201ENST00000216294 CC2D2BQ6DHV5 1058 aa17.29■□□□□ 0.36
SNAPC1-201ENST00000216294 U2AF1L4Q8WU68 220 aaKnown RBP17.29■□□□□ 0.36
SNAPC1-201ENST00000216294 UBLCP1Q8WVY7 318 aaPredicted RBP17.29■□□□□ 0.36
SNAPC1-201ENST00000216294 NOC2LQ9Y3T9 749 aaKnown RBP17.29■□□□□ 0.36
SNAPC1-201ENST00000216294 ABCB11O95342 1321 aa17.29■□□□□ 0.36
SNAPC1-201ENST00000216294 SART1O43290 800 aaKnown RBP17.29■□□□□ 0.36
SNAPC1-201ENST00000216294 MRPL12P52815 198 aaKnown RBP17.29■□□□□ 0.36
SNAPC1-201ENST00000216294 SKOR1P84550 965 aa17.29■□□□□ 0.36
SNAPC1-201ENST00000216294 SEPT2Q15019 361 aa17.29■□□□□ 0.36
SNAPC1-201ENST00000216294 LLGL1Q15334 1064 aa17.29■□□□□ 0.36
SNAPC1-201ENST00000216294 CCDC17Q96LX7 622 aa17.29■□□□□ 0.36
SNAPC1-201ENST00000216294 TRIM51Q9BSJ1 452 aa17.29■□□□□ 0.36
SNAPC1-201ENST00000216294 RUSC1Q9BVN2 902 aa17.29■□□□□ 0.36
SNAPC1-201ENST00000216294 ANO3Q9BYT9 981 aa17.29■□□□□ 0.36
SNAPC1-201ENST00000216294 BHMT2Q9H2M3 363 aa17.29■□□□□ 0.36
SNAPC1-201ENST00000216294 AIPL1Q9NZN9 384 aa17.29■□□□□ 0.36
SNAPC1-201ENST00000216294 FAM86B1E9PN63 330 aa17.28■□□□□ 0.36
SNAPC1-201ENST00000216294 CHMP2AO43633 222 aa17.28■□□□□ 0.36
SNAPC1-201ENST00000216294 FAM86B2P0C5J1 330 aa17.28■□□□□ 0.36
SNAPC1-201ENST00000216294 KCNA3P22001 575 aa17.28■□□□□ 0.36
SNAPC1-201ENST00000216294 PRPF4BQ13523 1007 aaKnown RBP17.28■□□□□ 0.36
SNAPC1-201ENST00000216294 SPRED3Q2MJR0 410 aa17.28■□□□□ 0.36
SNAPC1-201ENST00000216294 IQCDQ96DY2 449 aa17.28■□□□□ 0.36
SNAPC1-201ENST00000216294 ARMCX3Q9UH62 379 aaPredicted RBP17.28■□□□□ 0.36
SNAPC1-201ENST00000216294 ATP2C2O75185 946 aa17.28■□□□□ 0.36
SNAPC1-201ENST00000216294 IFT88Q13099 833 aa17.28■□□□□ 0.36
SNAPC1-201ENST00000216294 ZNF211Q13398 564 aaPredicted RBP17.28■□□□□ 0.36
SNAPC1-201ENST00000216294 EXOC3L4Q17RC7 722 aa17.28■□□□□ 0.36
SNAPC1-201ENST00000216294 ZNF473Q8WTR7 871 aaKnown RBP17.28■□□□□ 0.36
SNAPC1-201ENST00000216294 ATP6V1G3Q96LB4 118 aa17.28■□□□□ 0.36
SNAPC1-201ENST00000216294 CNOT8Q9UFF9 292 aaKnown RBP17.28■□□□□ 0.36
SNAPC1-201ENST00000216294 FBXL5Q9UKA1 691 aa17.28■□□□□ 0.36
SNAPC1-201ENST00000216294 ZBTB12Q9Y330 459 aaPredicted RBP17.28■□□□□ 0.36
SNAPC1-201ENST00000216294 IGSF9BQ9UPX0 1349 aa17.28■□□□□ 0.36
SNAPC1-201ENST00000216294 COL4A5P29400 1685 aa17.28■□□□□ 0.36
SNAPC1-201ENST00000216294 CLRN2A0PK11 232 aa17.27■□□□□ 0.36
SNAPC1-201ENST00000216294 GCNT3O95395 438 aa17.27■□□□□ 0.36
SNAPC1-201ENST00000216294 SPATA31C1P0DKV0 1188 aa17.27■□□□□ 0.36
SNAPC1-201ENST00000216294 NMT1P30419 496 aaKnown RBP17.27■□□□□ 0.36
SNAPC1-201ENST00000216294 PLS1Q14651 629 aa17.27■□□□□ 0.36
SNAPC1-201ENST00000216294 TRMT1LQ7Z2T5 733 aaKnown RBP17.27■□□□□ 0.36
SNAPC1-201ENST00000216294 DAAM2Q86T65 1068 aa17.27■□□□□ 0.36
SNAPC1-201ENST00000216294 LARGE2Q8N3Y3 721 aa17.27■□□□□ 0.36
SNAPC1-201ENST00000216294 RDH13Q8NBN7 331 aa17.27■□□□□ 0.36
SNAPC1-201ENST00000216294 CEP63Q96MT8 703 aa17.27■□□□□ 0.36
SNAPC1-201ENST00000216294 CCT8L2Q96SF2 557 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms