RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 JRKLQ9Y4A0 524 aa14.64□□□□□ -0.07
TGFBR3-201ENST00000212355 TMEM2Q9UHN6 1383 aa14.64□□□□□ -0.07
TGFBR3-201ENST00000212355 hCG_2014768A0A024R1R8 64 aa14.64□□□□□ -0.07
TGFBR3-201ENST00000212355 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.64□□□□□ -0.07
TGFBR3-201ENST00000212355 PDZD4Q76G19 769 aaPredicted RBP14.64□□□□□ -0.07
TGFBR3-201ENST00000212355 ZNF507Q8TCN5 953 aa14.64□□□□□ -0.07
TGFBR3-201ENST00000212355 MYCBPQ99417 103 aaPredicted RBP14.64□□□□□ -0.07
TGFBR3-201ENST00000212355 TFDP1Q14186 410 aa14.63□□□□□ -0.07
TGFBR3-201ENST00000212355 GRAMD1BQ3KR37 738 aa14.63□□□□□ -0.07
TGFBR3-201ENST00000212355 TRIM67Q6ZTA4 783 aa14.63□□□□□ -0.07
TGFBR3-201ENST00000212355 ENOX1Q8TC92 643 aaKnown RBP14.63□□□□□ -0.07
TGFBR3-201ENST00000212355 NUMBP49757 651 aa14.63□□□□□ -0.07
TGFBR3-201ENST00000212355 MAGOHP61326 146 aaKnown RBP14.63□□□□□ -0.07
TGFBR3-201ENST00000212355 ALKBH5Q6P6C2 394 aaKnown RBP14.63□□□□□ -0.07
TGFBR3-201ENST00000212355 RNF135Q8IUD6 432 aa14.63□□□□□ -0.07
TGFBR3-201ENST00000212355 TRIM10Q9UDY6 481 aa14.63□□□□□ -0.07
TGFBR3-201ENST00000212355 MYL3P08590 195 aa14.63□□□□□ -0.07
TGFBR3-201ENST00000212355 CCNE1P24864 410 aa14.63□□□□□ -0.07
TGFBR3-201ENST00000212355 DCAF15Q66K64 600 aa14.63□□□□□ -0.07
TGFBR3-201ENST00000212355 RSBN1LQ6PCB5 846 aaPredicted RBP14.63□□□□□ -0.07
TGFBR3-201ENST00000212355 IRX2Q9BZI1 471 aaPredicted RBP14.63□□□□□ -0.07
TGFBR3-201ENST00000212355 SLC13A1Q9BZW2 595 aa14.63□□□□□ -0.07
TGFBR3-201ENST00000212355 OSBPL3Q9H4L5 887 aa14.63□□□□□ -0.07
TGFBR3-201ENST00000212355 PCDHA6Q9UN73 950 aa14.63□□□□□ -0.07
TGFBR3-201ENST00000212355 PCDHA8Q9Y5H6 950 aa14.63□□□□□ -0.07
TGFBR3-201ENST00000212355 ZBED6P86452 979 aa14.63□□□□□ -0.07
TGFBR3-201ENST00000212355 TEX2Q8IWB9 1127 aa14.63□□□□□ -0.07
TGFBR3-201ENST00000212355 FAM118BQ9BPY3 351 aa14.63□□□□□ -0.07
TGFBR3-201ENST00000212355 ATP6V0A1Q93050 837 aa14.63□□□□□ -0.07
TGFBR3-201ENST00000212355 BEGAINQ9BUH8 593 aa14.63□□□□□ -0.07
TGFBR3-201ENST00000212355 TDRD3Q9H7E2 651 aaKnown RBP14.63□□□□□ -0.07
TGFBR3-201ENST00000212355 TLK1Q9UKI8 766 aa14.63□□□□□ -0.07
TGFBR3-201ENST00000212355 CCDC78A2IDD5 438 aa14.62□□□□□ -0.07
TGFBR3-201ENST00000212355 ESRRAP11474 423 aaPredicted RBP14.62□□□□□ -0.07
TGFBR3-201ENST00000212355 STX1BP61266 288 aa14.62□□□□□ -0.07
TGFBR3-201ENST00000212355 CACNB2Q08289 660 aaPredicted RBP14.62□□□□□ -0.07
TGFBR3-201ENST00000212355 SRRM1Q8IYB3 904 aaKnown RBP14.62□□□□□ -0.07
TGFBR3-201ENST00000212355 LRRC4Q9HBW1 653 aa14.62□□□□□ -0.07
TGFBR3-201ENST00000212355 SARS2Q9NP81 518 aaKnown RBP14.62□□□□□ -0.07
TGFBR3-201ENST00000212355 ARL4AP40617 200 aa14.62□□□□□ -0.07
TGFBR3-201ENST00000212355 MAP3K21Q5TCX8 1036 aa14.62□□□□□ -0.07
TGFBR3-201ENST00000212355 BBOF1Q8ND07 529 aa14.62□□□□□ -0.07
TGFBR3-201ENST00000212355 MIS12Q9H081 205 aa14.62□□□□□ -0.07
TGFBR3-201ENST00000212355 Q9H521 79 aa14.62□□□□□ -0.07
TGFBR3-201ENST00000212355 SEMA3EO15041 775 aa14.62□□□□□ -0.07
TGFBR3-201ENST00000212355 GAP43P17677 238 aa14.62□□□□□ -0.07
TGFBR3-201ENST00000212355 AOC3Q16853 763 aa14.62□□□□□ -0.07
TGFBR3-201ENST00000212355 RAB44Q7Z6P3 723 aaPredicted RBP14.62□□□□□ -0.07
TGFBR3-201ENST00000212355 IPO11Q9UI26 975 aaKnown RBP14.62□□□□□ -0.07
TGFBR3-201ENST00000212355 LAD1O00515 517 aa14.62□□□□□ -0.07
TGFBR3-201ENST00000212355 TADA3O75528 432 aa14.62□□□□□ -0.07
TGFBR3-201ENST00000212355 ZBED1O96006 694 aa14.62□□□□□ -0.07
TGFBR3-201ENST00000212355 ATXN3P54252 364 aaPredicted RBP14.62□□□□□ -0.07
TGFBR3-201ENST00000212355 GPATCH4Q5T3I0 446 aaKnown RBP14.62□□□□□ -0.07
TGFBR3-201ENST00000212355 ZC3H18Q86VM9 953 aaKnown RBP14.62□□□□□ -0.07
TGFBR3-201ENST00000212355 NEK9Q8TD19 979 aa14.62□□□□□ -0.07
TGFBR3-201ENST00000212355 DPF2Q92785 391 aa14.62□□□□□ -0.07
TGFBR3-201ENST00000212355 DDX47Q9H0S4 455 aaKnown RBP14.62□□□□□ -0.07
TGFBR3-201ENST00000212355 HAUS2Q9NVX0 235 aa14.62□□□□□ -0.07
TGFBR3-201ENST00000212355 TFR2Q9UP52 801 aa14.62□□□□□ -0.07
TGFBR3-201ENST00000212355 MAP3K7O43318 606 aa14.62□□□□□ -0.07
TGFBR3-201ENST00000212355 XPAP23025 273 aaPredicted RBP14.62□□□□□ -0.07
TGFBR3-201ENST00000212355 NFX1Q12986 1120 aaKnown RBP14.62□□□□□ -0.07
TGFBR3-201ENST00000212355 C1orf228Q6PIY5 440 aa14.62□□□□□ -0.07
TGFBR3-201ENST00000212355 SIX6OS1Q8N1H7 587 aa14.62□□□□□ -0.07
TGFBR3-201ENST00000212355 TTLL11Q8NHH1 800 aa14.62□□□□□ -0.07
TGFBR3-201ENST00000212355 C1orf54Q8WWF1 131 aa14.62□□□□□ -0.07
TGFBR3-201ENST00000212355 AK8Q96MA6 479 aa14.62□□□□□ -0.07
TGFBR3-201ENST00000212355 ATP1A1P05023 1023 aaKnown RBP14.61□□□□□ -0.07
TGFBR3-201ENST00000212355 TMEM270Q6UE05 265 aa14.61□□□□□ -0.07
TGFBR3-201ENST00000212355 RGS9BPQ6ZS82 235 aa14.61□□□□□ -0.07
TGFBR3-201ENST00000212355 BCAP29Q9UHQ4 241 aa14.61□□□□□ -0.07
TGFBR3-201ENST00000212355 DISP1Q96F81 1524 aa14.61□□□□□ -0.07
TGFBR3-201ENST00000212355 GOLGA8RI6L899 631 aa14.61□□□□□ -0.07
TGFBR3-201ENST00000212355 ERICH1Q86X53 443 aa14.61□□□□□ -0.07
TGFBR3-201ENST00000212355 ARL8AQ96BM9 186 aa14.61□□□□□ -0.07
TGFBR3-201ENST00000212355 RPF1Q9H9Y2 349 aaKnown RBP14.61□□□□□ -0.07
TGFBR3-201ENST00000212355 ROBO2Q9HCK4 1378 aa14.61□□□□□ -0.07
TGFBR3-201ENST00000212355 ARAP3Q8WWN8 1544 aa14.61□□□□□ -0.07
TGFBR3-201ENST00000212355 PRR36Q9H6K5 1346 aa14.61□□□□□ -0.07
TGFBR3-201ENST00000212355 PNMA6FA0A0J9YX94 578 aa14.61□□□□□ -0.07
TGFBR3-201ENST00000212355 FAM205CA6NFA0 338 aa14.61□□□□□ -0.07
TGFBR3-201ENST00000212355 FGFR4P22455 802 aa14.61□□□□□ -0.07
TGFBR3-201ENST00000212355 PPP2R5EQ16537 467 aa14.61□□□□□ -0.07
TGFBR3-201ENST00000212355 EFCAB13Q8IY85 973 aa14.61□□□□□ -0.07
TGFBR3-201ENST00000212355 STAG2Q8N3U4 1231 aa14.61□□□□□ -0.07
TGFBR3-201ENST00000212355 PBKQ96KB5 322 aa14.61□□□□□ -0.07
TGFBR3-201ENST00000212355 PANX2Q96RD6 677 aa14.61□□□□□ -0.07
TGFBR3-201ENST00000212355 PPARGC1AQ9UBK2 798 aaKnown RBP14.61□□□□□ -0.07
TGFBR3-201ENST00000212355 IFNAR1P17181 557 aa14.61□□□□□ -0.07
TGFBR3-201ENST00000212355 OCRLQ01968 901 aa14.61□□□□□ -0.07
TGFBR3-201ENST00000212355 NME3Q13232 169 aa14.61□□□□□ -0.07
TGFBR3-201ENST00000212355 TXNRD1Q16881 649 aa14.61□□□□□ -0.07
TGFBR3-201ENST00000212355 MUM1L1Q5H9M0 696 aa14.61□□□□□ -0.07
TGFBR3-201ENST00000212355 SPDYE1Q8NFV5 336 aaPredicted RBP14.61□□□□□ -0.07
TGFBR3-201ENST00000212355 RAPGEF5Q92565 580 aa14.61□□□□□ -0.07
TGFBR3-201ENST00000212355 MGEA5O60502 916 aa14.61□□□□□ -0.07
TGFBR3-201ENST00000212355 ATICP31939 592 aa14.61□□□□□ -0.07
TGFBR3-201ENST00000212355 CCDC138Q96M89 665 aa14.61□□□□□ -0.07
TGFBR3-201ENST00000212355 STRBPQ96SI9 672 aaKnown RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms