RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 NFIL3Q16649 462 aa20.49■□□□□ 0.87
CTSA-201ENST00000191018 EAPPQ56P03 285 aaPredicted RBP20.49■□□□□ 0.87
CTSA-201ENST00000191018 LDLRAD1Q5T700 205 aa20.49■□□□□ 0.87
CTSA-201ENST00000191018 ARMC9Q7Z3E5 817 aa20.49■□□□□ 0.87
CTSA-201ENST00000191018 ANKRD35Q8N283 1001 aa20.49■□□□□ 0.87
CTSA-201ENST00000191018 OPTNQ96CV9 577 aa20.49■□□□□ 0.87
CTSA-201ENST00000191018 DESI2Q9BSY9 194 aa20.49■□□□□ 0.87
CTSA-201ENST00000191018 STRA6Q9BX79 667 aa20.49■□□□□ 0.87
CTSA-201ENST00000191018 PCDHA10Q9Y5I2 948 aa20.49■□□□□ 0.87
CTSA-201ENST00000191018 RIOK3O14730 519 aaKnown RBP20.48■□□□□ 0.87
CTSA-201ENST00000191018 CNMDO75829 334 aa20.48■□□□□ 0.87
CTSA-201ENST00000191018 CCDC175P0C221 793 aa20.48■□□□□ 0.87
CTSA-201ENST00000191018 ETF1P62495 437 aaKnown RBP20.48■□□□□ 0.87
CTSA-201ENST00000191018 GNPTABQ3T906 1256 aa20.48■□□□□ 0.87
CTSA-201ENST00000191018 ODR4Q5SWX8 454 aa20.48■□□□□ 0.87
CTSA-201ENST00000191018 WDR59Q6PJI9 974 aa20.48■□□□□ 0.87
CTSA-201ENST00000191018 PNMA8AQ86V59 439 aaPredicted RBP20.48■□□□□ 0.87
CTSA-201ENST00000191018 FAM178BQ8IXR5 827 aa20.48■□□□□ 0.87
CTSA-201ENST00000191018 SMAP1Q8IYB5 467 aaPredicted RBP20.48■□□□□ 0.87
CTSA-201ENST00000191018 KIF18AQ8NI77 898 aa20.48■□□□□ 0.87
CTSA-201ENST00000191018 ANKEF1Q9NU02 776 aa20.48■□□□□ 0.87
CTSA-201ENST00000191018 FAM184BQ9ULE4 1060 aa20.48■□□□□ 0.87
CTSA-201ENST00000191018 LRRC37A2A6NM11 1700 aa20.48■□□□□ 0.87
CTSA-201ENST00000191018 ARID2Q68CP9 1835 aa20.48■□□□□ 0.87
CTSA-201ENST00000191018 PPP1R37O75864 691 aa20.47■□□□□ 0.87
CTSA-201ENST00000191018 ICAM3P32942 547 aa20.47■□□□□ 0.87
CTSA-201ENST00000191018 CNTN2Q02246 1040 aa20.47■□□□□ 0.87
CTSA-201ENST00000191018 ZC2HC1CQ53FD0 456 aaPredicted RBP20.47■□□□□ 0.87
CTSA-201ENST00000191018 FRMD5Q7Z6J6 570 aa20.47■□□□□ 0.87
CTSA-201ENST00000191018 ZNF592Q92610 1267 aa20.47■□□□□ 0.87
CTSA-201ENST00000191018 PCMTD1Q96MG8 357 aaPredicted RBP20.47■□□□□ 0.87
CTSA-201ENST00000191018 GRIN3BO60391 1043 aa20.47■□□□□ 0.87
CTSA-201ENST00000191018 EIF3JO75822 258 aaKnown RBP20.47■□□□□ 0.87
CTSA-201ENST00000191018 NR3C1P04150 777 aa20.47■□□□□ 0.87
CTSA-201ENST00000191018 MAPTP10636 758 aaKnown RBP20.47■□□□□ 0.87
CTSA-201ENST00000191018 ERCC3P19447 782 aa20.47■□□□□ 0.87
CTSA-201ENST00000191018 ALDH5A1P51649 535 aaPredicted RBP20.47■□□□□ 0.87
CTSA-201ENST00000191018 KCNMA1Q12791 1236 aa20.47■□□□□ 0.87
CTSA-201ENST00000191018 STXBP2Q15833 593 aa20.47■□□□□ 0.87
CTSA-201ENST00000191018 STXBP4Q6ZWJ1 553 aa20.47■□□□□ 0.87
CTSA-201ENST00000191018 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.47■□□□□ 0.87
CTSA-201ENST00000191018 CHP1Q99653 195 aa20.47■□□□□ 0.87
CTSA-201ENST00000191018 TIPINQ9BVW5 301 aa20.47■□□□□ 0.87
CTSA-201ENST00000191018 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.47■□□□□ 0.87
CTSA-201ENST00000191018 RPL13P26373 211 aaKnown RBP20.46■□□□□ 0.87
CTSA-201ENST00000191018 JPH1Q9HDC5 661 aaPredicted RBP20.46■□□□□ 0.87
CTSA-201ENST00000191018 PHLPP2Q6ZVD8 1323 aa20.45■□□□□ 0.87
CTSA-201ENST00000191018 EPHB6O15197 1021 aa20.45■□□□□ 0.86
CTSA-201ENST00000191018 SLC16A3O15427 465 aaKnown RBP20.45■□□□□ 0.86
CTSA-201ENST00000191018 EDNRBP24530 442 aa20.45■□□□□ 0.86
CTSA-201ENST00000191018 GPAT2Q6NUI2 795 aa20.45■□□□□ 0.86
CTSA-201ENST00000191018 SYT10Q6XYQ8 523 aa20.45■□□□□ 0.86
CTSA-201ENST00000191018 FASTKD5Q7L8L6 764 aaKnown RBP20.45■□□□□ 0.86
CTSA-201ENST00000191018 EDEM3Q9BZQ6 932 aa20.45■□□□□ 0.86
CTSA-201ENST00000191018 LARSQ9P2J5 1176 aaKnown RBP20.45■□□□□ 0.86
CTSA-201ENST00000191018 SLC9A2Q9UBY0 812 aa20.45■□□□□ 0.86
CTSA-201ENST00000191018 PCDHB13Q9Y5F0 798 aa20.45■□□□□ 0.86
CTSA-201ENST00000191018 TMEM150BA6NC51 233 aa20.45■□□□□ 0.86
CTSA-201ENST00000191018 BACH1O14867 736 aa20.45■□□□□ 0.86
CTSA-201ENST00000191018 AKAP3O75969 853 aa20.45■□□□□ 0.86
CTSA-201ENST00000191018 HNRNPH3P31942 346 aaKnown RBP20.45■□□□□ 0.86
CTSA-201ENST00000191018 GJA5P36382 358 aa20.45■□□□□ 0.86
CTSA-201ENST00000191018 FSTL1Q12841 308 aa20.45■□□□□ 0.86
CTSA-201ENST00000191018 TSR1Q2NL82 804 aaKnown RBP20.45■□□□□ 0.86
CTSA-201ENST00000191018 ANO5Q75V66 913 aa20.45■□□□□ 0.86
CTSA-201ENST00000191018 NCAPG2Q86XI2 1143 aa20.45■□□□□ 0.86
CTSA-201ENST00000191018 CCDC155Q8N6L0 562 aa20.45■□□□□ 0.86
CTSA-201ENST00000191018 FAM133AQ8N9E0 248 aa20.45■□□□□ 0.86
CTSA-201ENST00000191018 ZNF397Q8NF99 534 aaPredicted RBP20.45■□□□□ 0.86
CTSA-201ENST00000191018 PAGR1Q9BTK6 254 aa20.45■□□□□ 0.86
CTSA-201ENST00000191018 USO1O60763 962 aaKnown RBP20.44■□□□□ 0.86
CTSA-201ENST00000191018 STBD1O95210 358 aa20.44■□□□□ 0.86
CTSA-201ENST00000191018 SLC25A27O95847 323 aa20.44■□□□□ 0.86
CTSA-201ENST00000191018 CDK17Q00537 523 aa20.44■□□□□ 0.86
CTSA-201ENST00000191018 PPP2R3AQ06190 1150 aa20.44■□□□□ 0.86
CTSA-201ENST00000191018 UTP14CQ5TAP6 766 aaKnown RBP20.44■□□□□ 0.86
CTSA-201ENST00000191018 SMCR8Q8TEV9 937 aaPredicted RBP20.44■□□□□ 0.86
CTSA-201ENST00000191018 MMRN2Q9H8L6 949 aa20.44■□□□□ 0.86
CTSA-201ENST00000191018 FAM207AQ9NSI2 230 aaPredicted RBP20.44■□□□□ 0.86
CTSA-201ENST00000191018 RBPJLQ9UBG7 517 aa20.44■□□□□ 0.86
CTSA-201ENST00000191018 ARMCX3Q9UH62 379 aaPredicted RBP20.44■□□□□ 0.86
CTSA-201ENST00000191018 MYH9P35579 1960 aaKnown RBP20.43■□□□□ 0.86
CTSA-201ENST00000191018 SOWAHBA6NEL2 793 aa20.43■□□□□ 0.86
CTSA-201ENST00000191018 UNCXA6NJT0 531 aa20.43■□□□□ 0.86
CTSA-201ENST00000191018 ZNF862O60290 1169 aa20.43■□□□□ 0.86
CTSA-201ENST00000191018 DKC1O60832 514 aaKnown RBP eCLIP20.43■□□□□ 0.86
CTSA-201ENST00000191018 PSAPP07602 524 aa20.43■□□□□ 0.86
CTSA-201ENST00000191018 PLS3P13797 630 aa20.43■□□□□ 0.86
CTSA-201ENST00000191018 SP2Q02086 613 aa20.43■□□□□ 0.86
CTSA-201ENST00000191018 ALCAMQ13740 583 aa20.43■□□□□ 0.86
CTSA-201ENST00000191018 ABHD15Q6UXT9 468 aa20.43■□□□□ 0.86
CTSA-201ENST00000191018 ATP6V0A1Q93050 837 aa20.43■□□□□ 0.86
CTSA-201ENST00000191018 IKZF4Q9H2S9 585 aa20.43■□□□□ 0.86
CTSA-201ENST00000191018 METTL14Q9HCE5 456 aaKnown RBP20.43■□□□□ 0.86
CTSA-201ENST00000191018 TXNRD2Q9NNW7 524 aa20.43■□□□□ 0.86
CTSA-201ENST00000191018 GABBR1Q9UBS5 961 aa20.43■□□□□ 0.86
CTSA-201ENST00000191018 PLAGL2Q9UPG8 496 aa20.43■□□□□ 0.86
CTSA-201ENST00000191018 TELO2Q9Y4R8 837 aa20.43■□□□□ 0.86
CTSA-201ENST00000191018 POTEB2H3BUK9 544 aa20.43■□□□□ 0.86
CTSA-201ENST00000191018 CLIC2O15247 247 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms