RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 C12orf60Q5U649 245 aa24.95■■□□□ 1.58
TARBP1-201ENST00000040877 TTC39CQ8N584 583 aa24.95■■□□□ 1.58
TARBP1-201ENST00000040877 BCAS4Q8TDM0 211 aa24.95■■□□□ 1.58
TARBP1-201ENST00000040877 UBN2Q6ZU65 1347 aa24.95■■□□□ 1.58
TARBP1-201ENST00000040877 CCDC188H7C350 402 aa24.95■■□□□ 1.58
TARBP1-201ENST00000040877 CCDC38Q502W7 563 aa24.95■■□□□ 1.58
TARBP1-201ENST00000040877 PLTPP55058 493 aa24.94■■□□□ 1.58
TARBP1-201ENST00000040877 WHAMMQ8TF30 809 aa24.94■■□□□ 1.58
TARBP1-201ENST00000040877 CCDC151A5D8V7 595 aa24.94■■□□□ 1.58
TARBP1-201ENST00000040877 KCNQ2O43526 872 aa24.94■■□□□ 1.58
TARBP1-201ENST00000040877 SPP2Q13103 211 aa24.94■■□□□ 1.58
TARBP1-201ENST00000040877 TAB3Q8N5C8 712 aaPredicted RBP24.94■■□□□ 1.58
TARBP1-201ENST00000040877 DNAAF3Q8N9W5 541 aa24.94■■□□□ 1.58
TARBP1-201ENST00000040877 SPTLC3Q9NUV7 552 aa24.94■■□□□ 1.58
TARBP1-201ENST00000040877 TMEM35BQ8NCS4 154 aa24.94■■□□□ 1.58
TARBP1-201ENST00000040877 NOC2LQ9Y3T9 749 aaKnown RBP24.94■■□□□ 1.58
TARBP1-201ENST00000040877 SUN1O94901 812 aa24.94■■□□□ 1.58
TARBP1-201ENST00000040877 SLFNL1Q499Z3 407 aa24.94■■□□□ 1.58
TARBP1-201ENST00000040877 ZNF34Q8IZ26 560 aa24.94■■□□□ 1.58
TARBP1-201ENST00000040877 ADGRF4Q8IZF3 695 aa24.94■■□□□ 1.58
TARBP1-201ENST00000040877 FAM49AQ9H0Q0 323 aaPredicted RBP24.94■■□□□ 1.58
TARBP1-201ENST00000040877 DNAJC12Q9UKB3 198 aa24.94■■□□□ 1.58
TARBP1-201ENST00000040877 GPC4O75487 556 aa24.93■■□□□ 1.58
TARBP1-201ENST00000040877 MSH2P43246 934 aa24.93■■□□□ 1.58
TARBP1-201ENST00000040877 ZNF302Q9NR11 478 aa24.93■■□□□ 1.58
TARBP1-201ENST00000040877 PXDNLA1KZ92 1463 aa24.93■■□□□ 1.58
TARBP1-201ENST00000040877 A0A087WWV3 80 aa24.93■■□□□ 1.58
TARBP1-201ENST00000040877 NMT2O60551 498 aa24.93■■□□□ 1.58
TARBP1-201ENST00000040877 PSMC5P62195 406 aa24.93■■□□□ 1.58
TARBP1-201ENST00000040877 ZNF449Q6P9G9 518 aa24.93■■□□□ 1.58
TARBP1-201ENST00000040877 ADAMTS1Q9UHI8 967 aa24.93■■□□□ 1.58
TARBP1-201ENST00000040877 CIITAP33076 1130 aa24.93■■□□□ 1.58
TARBP1-201ENST00000040877 STRIP1Q5VSL9 837 aa24.93■■□□□ 1.58
TARBP1-201ENST00000040877 THNSL1Q8IYQ7 743 aa24.93■■□□□ 1.58
TARBP1-201ENST00000040877 FMR1NBQ8N0W7 255 aaPredicted RBP24.93■■□□□ 1.58
TARBP1-201ENST00000040877 CAMSAP1Q5T5Y3 1602 aa24.93■■□□□ 1.58
TARBP1-201ENST00000040877 CDC27P30260 824 aa24.93■■□□□ 1.58
TARBP1-201ENST00000040877 NSUN4Q96CB9 384 aaKnown RBP24.93■■□□□ 1.58
TARBP1-201ENST00000040877 MTRQ99707 1265 aa24.93■■□□□ 1.58
TARBP1-201ENST00000040877 EFCC1Q9HA90 598 aa24.93■■□□□ 1.58
TARBP1-201ENST00000040877 KRT3P12035 628 aa24.92■■□□□ 1.58
TARBP1-201ENST00000040877 ATP1A3P13637 1013 aa24.92■■□□□ 1.58
TARBP1-201ENST00000040877 COASYQ13057 564 aa24.92■■□□□ 1.58
TARBP1-201ENST00000040877 SBK1Q52WX2 424 aa24.92■■□□□ 1.58
TARBP1-201ENST00000040877 ARHGAP42A6NI28 874 aa24.92■■□□□ 1.58
TARBP1-201ENST00000040877 EVI5O60447 810 aa24.92■■□□□ 1.58
TARBP1-201ENST00000040877 SAT1P21673 171 aa24.92■■□□□ 1.58
TARBP1-201ENST00000040877 ELF1P32519 619 aa24.92■■□□□ 1.58
TARBP1-201ENST00000040877 KNOP1Q1ED39 458 aaKnown RBP24.92■■□□□ 1.58
TARBP1-201ENST00000040877 MID2Q9UJV3 735 aa24.92■■□□□ 1.58
TARBP1-201ENST00000040877 EIF3BP55884 814 aaKnown RBP24.92■■□□□ 1.58
TARBP1-201ENST00000040877 C4orf50Q6ZRC1 276 aa24.92■■□□□ 1.58
TARBP1-201ENST00000040877 EP400NLQ6ZTU2 488 aa24.92■■□□□ 1.58
TARBP1-201ENST00000040877 GUF1Q8N442 669 aaKnown RBP24.92■■□□□ 1.58
TARBP1-201ENST00000040877 DYDC2Q96IM9 177 aa24.92■■□□□ 1.58
TARBP1-201ENST00000040877 PDE11AQ9HCR9 933 aa24.92■■□□□ 1.58
TARBP1-201ENST00000040877 RBBP5Q15291 538 aaKnown RBP24.91■■□□□ 1.58
TARBP1-201ENST00000040877 KCNV1Q6PIU1 500 aa24.91■■□□□ 1.58
TARBP1-201ENST00000040877 MYL3P08590 195 aa24.91■■□□□ 1.58
TARBP1-201ENST00000040877 TBXAS1P24557 533 aaPredicted RBP24.91■■□□□ 1.58
TARBP1-201ENST00000040877 SNX1Q13596 522 aa24.91■■□□□ 1.58
TARBP1-201ENST00000040877 RAPH1Q70E73 1250 aa24.91■■□□□ 1.58
TARBP1-201ENST00000040877 BANK1Q8NDB2 785 aa24.91■■□□□ 1.58
TARBP1-201ENST00000040877 OR6B3Q8NGW1 331 aa24.91■■□□□ 1.58
TARBP1-201ENST00000040877 OXER1Q8TDS5 423 aa24.91■■□□□ 1.58
TARBP1-201ENST00000040877 STRIP2Q9ULQ0 834 aa24.91■■□□□ 1.58
TARBP1-201ENST00000040877 F8W8V4 182 aa24.91■■□□□ 1.58
TARBP1-201ENST00000040877 BASP1P80723 227 aaKnown RBP24.91■■□□□ 1.58
TARBP1-201ENST00000040877 GJB4Q9NTQ9 266 aa24.91■■□□□ 1.58
TARBP1-201ENST00000040877 SFI1A8K8P3 1242 aa24.91■■□□□ 1.58
TARBP1-201ENST00000040877 PPARDQ03181 441 aa24.91■■□□□ 1.58
TARBP1-201ENST00000040877 MKRN3Q13064 507 aaKnown RBP24.91■■□□□ 1.58
TARBP1-201ENST00000040877 SCARA5Q6ZMJ2 495 aa24.91■■□□□ 1.58
TARBP1-201ENST00000040877 FASTKD5Q7L8L6 764 aaKnown RBP24.91■■□□□ 1.58
TARBP1-201ENST00000040877 THEM5Q8N1Q8 247 aa24.91■■□□□ 1.58
TARBP1-201ENST00000040877 TBC1D16Q8TBP0 767 aa24.91■■□□□ 1.58
TARBP1-201ENST00000040877 HDAC11Q96DB2 347 aa24.91■■□□□ 1.58
TARBP1-201ENST00000040877 CEP152O94986 1710 aa24.9■■□□□ 1.58
TARBP1-201ENST00000040877 IQCA1LA6NCM1 817 aa24.9■■□□□ 1.58
TARBP1-201ENST00000040877 E9PMD0 336 aa24.9■■□□□ 1.58
TARBP1-201ENST00000040877 CUL1Q13616 776 aa24.9■■□□□ 1.58
TARBP1-201ENST00000040877 E9PCH4 1651 aa24.9■■□□□ 1.58
TARBP1-201ENST00000040877 IPO5O00410 1097 aaKnown RBP24.9■■□□□ 1.58
TARBP1-201ENST00000040877 CYP27A1Q02318 531 aa24.9■■□□□ 1.58
TARBP1-201ENST00000040877 NAALADL2Q58DX5 795 aa24.9■■□□□ 1.58
TARBP1-201ENST00000040877 RBM41Q96IZ5 413 aaKnown RBP24.9■■□□□ 1.58
TARBP1-201ENST00000040877 GCNAQ96QF7 691 aa24.9■■□□□ 1.58
TARBP1-201ENST00000040877 PPP1R12CQ9BZL4 782 aa24.9■■□□□ 1.58
TARBP1-201ENST00000040877 CNOT10Q9H9A5 744 aaKnown RBP24.9■■□□□ 1.58
TARBP1-201ENST00000040877 ATP8A1Q9Y2Q0 1164 aa24.9■■□□□ 1.58
TARBP1-201ENST00000040877 FAM196BA6NMK8 535 aa24.9■■□□□ 1.58
TARBP1-201ENST00000040877 BAIAP2L1Q9UHR4 511 aa24.9■■□□□ 1.58
TARBP1-201ENST00000040877 CALB1P05937 261 aa24.9■■□□□ 1.58
TARBP1-201ENST00000040877 NFKBIAP25963 317 aa24.9■■□□□ 1.58
TARBP1-201ENST00000040877 DR1Q01658 176 aa24.9■■□□□ 1.58
TARBP1-201ENST00000040877 VCX3AQ9NNX9 186 aa24.9■■□□□ 1.58
TARBP1-201ENST00000040877 ZNRF3Q9ULT6 936 aa24.9■■□□□ 1.58
TARBP1-201ENST00000040877 CSF1RP07333 972 aa24.89■■□□□ 1.58
TARBP1-201ENST00000040877 ATP2C1P98194 919 aaPredicted RBP24.89■■□□□ 1.58
TARBP1-201ENST00000040877 DHX9Q08211 1270 aaKnown RBP24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms