RNA–Protein interactions for RNA: ENST00000016946.7

RGPD5-201, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD5, Length 7,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-201ENST00000016946 SEL1LQ9UBV2 794 aa11.98□□□□□ -0.49
RGPD5-201ENST00000016946 A6NNZ2 444 aa11.98□□□□□ -0.49
RGPD5-201ENST00000016946 CTNNA1P35221 906 aaKnown RBP11.98□□□□□ -0.49
RGPD5-201ENST00000016946 TUBB8Q3ZCM7 444 aa11.98□□□□□ -0.49
RGPD5-201ENST00000016946 C9orf131Q5VYM1 1079 aa11.98□□□□□ -0.49
RGPD5-201ENST00000016946 LRRC8AQ8IWT6 810 aa11.98□□□□□ -0.49
RGPD5-201ENST00000016946 PPFIA1Q13136 1202 aa11.98□□□□□ -0.49
RGPD5-201ENST00000016946 ERICH1Q86X53 443 aa11.98□□□□□ -0.49
RGPD5-201ENST00000016946 CLEC10AQ8IUN9 316 aa11.98□□□□□ -0.49
RGPD5-201ENST00000016946 OR6J1Q8NGC5 347 aa11.98□□□□□ -0.49
RGPD5-201ENST00000016946 POTEFA5A3E0 1075 aa11.98□□□□□ -0.49
RGPD5-201ENST00000016946 POTEIP0CG38 1075 aa11.98□□□□□ -0.49
RGPD5-201ENST00000016946 TSGA10IPQ3SY00 556 aa11.98□□□□□ -0.49
RGPD5-201ENST00000016946 POTEGQ6S5H5 508 aa11.98□□□□□ -0.49
RGPD5-201ENST00000016946 POTEEQ6S8J3 1075 aa11.98□□□□□ -0.49
RGPD5-201ENST00000016946 C16orf86Q6ZW13 317 aa11.98□□□□□ -0.49
RGPD5-201ENST00000016946 FAM213AQ9BRX8 229 aa11.98□□□□□ -0.49
RGPD5-201ENST00000016946 CALN1Q9BXU9 219 aa11.98□□□□□ -0.49
RGPD5-201ENST00000016946 ANAPC5Q9UJX4 755 aa11.98□□□□□ -0.49
RGPD5-201ENST00000016946 CEP170BQ9Y4F5 1589 aaPredicted RBP11.98□□□□□ -0.49
RGPD5-201ENST00000016946 LRRD1A4D1F6 860 aa11.98□□□□□ -0.49
RGPD5-201ENST00000016946 YWHAGP61981 247 aaKnown RBP eCLIP11.98□□□□□ -0.49
RGPD5-201ENST00000016946 RUNDC3BQ96NL0 473 aa11.98□□□□□ -0.49
RGPD5-201ENST00000016946 LAMC1P11047 1609 aa11.97□□□□□ -0.49
RGPD5-201ENST00000016946 CIITAP33076 1130 aa11.97□□□□□ -0.49
RGPD5-201ENST00000016946 DDX23Q9BUQ8 820 aaKnown RBP11.97□□□□□ -0.49
RGPD5-201ENST00000016946 KBTBD13C9JR72 458 aa11.97□□□□□ -0.49
RGPD5-201ENST00000016946 RGS16O15492 202 aaPredicted RBP11.97□□□□□ -0.49
RGPD5-201ENST00000016946 RASA1P20936 1047 aa11.97□□□□□ -0.49
RGPD5-201ENST00000016946 GPRC5AQ8NFJ5 357 aa11.97□□□□□ -0.49
RGPD5-201ENST00000016946 MRPL4Q9BYD3 311 aaKnown RBP11.97□□□□□ -0.49
RGPD5-201ENST00000016946 INO80Q9ULG1 1556 aaPredicted RBP11.97□□□□□ -0.49
RGPD5-201ENST00000016946 GBP1P32455 592 aa11.97□□□□□ -0.49
RGPD5-201ENST00000016946 SREBF2Q12772 1141 aa11.97□□□□□ -0.49
RGPD5-201ENST00000016946 ZNF699Q32M78 642 aa11.97□□□□□ -0.49
RGPD5-201ENST00000016946 SLC10A5Q5PT55 438 aa11.97□□□□□ -0.49
RGPD5-201ENST00000016946 CAPN12Q6ZSI9 719 aa11.97□□□□□ -0.49
RGPD5-201ENST00000016946 ZNF668Q96K58 619 aaPredicted RBP11.97□□□□□ -0.49
RGPD5-201ENST00000016946 POLD4Q9HCU8 107 aa11.97□□□□□ -0.49
RGPD5-201ENST00000016946 PRDM5Q9NQX1 630 aaPredicted RBP11.97□□□□□ -0.49
RGPD5-201ENST00000016946 NOC2LQ9Y3T9 749 aaKnown RBP11.97□□□□□ -0.49
RGPD5-201ENST00000016946 ACTN1P12814 892 aa11.97□□□□□ -0.49
RGPD5-201ENST00000016946 GUCY2FP51841 1108 aa11.97□□□□□ -0.49
RGPD5-201ENST00000016946 SKA2Q8WVK7 121 aaPredicted RBP11.97□□□□□ -0.49
RGPD5-201ENST00000016946 PRR12Q9ULL5 1215 aa11.97□□□□□ -0.49
RGPD5-201ENST00000016946 TPD52P55327 224 aaPredicted RBP11.97□□□□□ -0.49
RGPD5-201ENST00000016946 CEP57Q86XR8 500 aa11.97□□□□□ -0.49
RGPD5-201ENST00000016946 ELMOD1Q8N336 334 aa11.97□□□□□ -0.49
RGPD5-201ENST00000016946 SRBD1Q8N5C6 995 aaKnown RBP11.97□□□□□ -0.49
RGPD5-201ENST00000016946 SCINQ9Y6U3 715 aa11.97□□□□□ -0.49
RGPD5-201ENST00000016946 MCF2LO15068 1137 aa11.96□□□□□ -0.49
RGPD5-201ENST00000016946 GPC3P51654 580 aa11.96□□□□□ -0.49
RGPD5-201ENST00000016946 EFNA5P52803 228 aa11.96□□□□□ -0.49
RGPD5-201ENST00000016946 ZNF394Q53GI3 561 aa11.96□□□□□ -0.49
RGPD5-201ENST00000016946 SCN4BQ8IWT1 228 aa11.96□□□□□ -0.49
RGPD5-201ENST00000016946 EFCAB13Q8IY85 973 aa11.96□□□□□ -0.49
RGPD5-201ENST00000016946 SCYL3Q8IZE3 742 aa11.96□□□□□ -0.49
RGPD5-201ENST00000016946 PPP4R1Q8TF05 950 aa11.96□□□□□ -0.49
RGPD5-201ENST00000016946 SEPT1Q8WYJ6 367 aa11.96□□□□□ -0.49
RGPD5-201ENST00000016946 GCLMP48507 274 aa11.96□□□□□ -0.49
RGPD5-201ENST00000016946 COASYQ13057 564 aa11.96□□□□□ -0.49
RGPD5-201ENST00000016946 TMEM35BQ8NCS4 154 aa11.96□□□□□ -0.49
RGPD5-201ENST00000016946 MAGOHBQ96A72 148 aaKnown RBP11.96□□□□□ -0.49
RGPD5-201ENST00000016946 GDAP1L1Q96MZ0 367 aa11.96□□□□□ -0.49
RGPD5-201ENST00000016946 NDUFAB1O14561 156 aa11.96□□□□□ -0.49
RGPD5-201ENST00000016946 EIF4A3P38919 411 aaKnown RBP11.96□□□□□ -0.49
RGPD5-201ENST00000016946 RFX5P48382 616 aaPredicted RBP11.96□□□□□ -0.49
RGPD5-201ENST00000016946 XKR3Q5GH77 459 aa11.96□□□□□ -0.49
RGPD5-201ENST00000016946 SDCCAG8Q86SQ7 713 aaPredicted RBP11.96□□□□□ -0.49
RGPD5-201ENST00000016946 C1orf228Q6PIY5 440 aa11.96□□□□□ -0.49
RGPD5-201ENST00000016946 PROM2Q8N271 834 aa11.96□□□□□ -0.49
RGPD5-201ENST00000016946 EIF2AK1Q9BQI3 630 aaKnown RBP11.96□□□□□ -0.49
RGPD5-201ENST00000016946 ALDH8A1Q9H2A2 487 aaPredicted RBP11.96□□□□□ -0.49
RGPD5-201ENST00000016946 GINM1Q9NU53 330 aa11.96□□□□□ -0.49
RGPD5-201ENST00000016946 SCAF8Q9UPN6 1271 aaKnown RBP11.96□□□□□ -0.49
RGPD5-201ENST00000016946 SGK1O00141 431 aa11.96□□□□□ -0.5
RGPD5-201ENST00000016946 DPYSL4O14531 572 aa11.96□□□□□ -0.5
RGPD5-201ENST00000016946 CIB2O75838 187 aa11.96□□□□□ -0.5
RGPD5-201ENST00000016946 GH1P01241 217 aa11.96□□□□□ -0.5
RGPD5-201ENST00000016946 STOX1Q6ZVD7 989 aa11.96□□□□□ -0.5
RGPD5-201ENST00000016946 MST1RQ04912 1400 aa11.96□□□□□ -0.5
RGPD5-201ENST00000016946 SERPING1P05155 500 aa11.96□□□□□ -0.5
RGPD5-201ENST00000016946 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.96□□□□□ -0.5
RGPD5-201ENST00000016946 MKRN1Q9UHC7 482 aaKnown RBP11.96□□□□□ -0.5
RGPD5-201ENST00000016946 DNAJC12Q9UKB3 198 aa11.96□□□□□ -0.5
RGPD5-201ENST00000016946 E9PCH4 1651 aa11.96□□□□□ -0.5
RGPD5-201ENST00000016946 CDC42EP1Q00587 391 aa11.95□□□□□ -0.5
RGPD5-201ENST00000016946 ALKBH5Q6P6C2 394 aaKnown RBP11.95□□□□□ -0.5
RGPD5-201ENST00000016946 ZNF449Q6P9G9 518 aa11.95□□□□□ -0.5
RGPD5-201ENST00000016946 CHST13Q8NET6 341 aa11.95□□□□□ -0.5
RGPD5-201ENST00000016946 SRGNP10124 158 aa11.95□□□□□ -0.5
RGPD5-201ENST00000016946 TCP11X2Q5H9J9 407 aa11.95□□□□□ -0.5
RGPD5-201ENST00000016946 KATNAL1Q9BW62 490 aa11.95□□□□□ -0.5
RGPD5-201ENST00000016946 NGRNQ9NPE2 291 aaKnown RBP11.95□□□□□ -0.5
RGPD5-201ENST00000016946 CALRP27797 417 aaKnown RBP11.95□□□□□ -0.5
RGPD5-201ENST00000016946 STX2P32856 288 aa11.95□□□□□ -0.5
RGPD5-201ENST00000016946 KRT31Q15323 416 aa11.95□□□□□ -0.5
RGPD5-201ENST00000016946 C10orf76Q5T2E6 689 aa11.95□□□□□ -0.5
RGPD5-201ENST00000016946 CYFIP1Q7L576 1253 aa11.95□□□□□ -0.5
RGPD5-201ENST00000016946 VSIG1Q86XK7 387 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms