RNA–Protein interactions for RNA: ENST00000013034.3

NME1-201, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 3 BASIC

Gene NME1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-201ENST00000013034 TMX1Q9H3N1 280 aa12.75□□□□□ -0.37
NME1-201ENST00000013034 BAZ2BQ9UIF8 2168 aaKnown RBP12.75□□□□□ -0.37
NME1-201ENST00000013034 LZTS1Q9Y250 596 aa12.75□□□□□ -0.37
NME1-201ENST00000013034 PCDHB7Q9Y5E2 793 aa12.75□□□□□ -0.37
NME1-201ENST00000013034 ZDBF2Q9HCK1 2354 aa12.74□□□□□ -0.37
NME1-201ENST00000013034 KAT6AQ92794 2004 aa12.74□□□□□ -0.37
NME1-201ENST00000013034 DENND3A2RUS2 1198 aa12.74□□□□□ -0.37
NME1-201ENST00000013034 TBKBP1A7MCY6 615 aa12.74□□□□□ -0.37
NME1-201ENST00000013034 FSCN2O14926 492 aa12.74□□□□□ -0.37
NME1-201ENST00000013034 GFRA3O60609 400 aa12.74□□□□□ -0.37
NME1-201ENST00000013034 FGF18O76093 207 aa12.74□□□□□ -0.37
NME1-201ENST00000013034 CALM1P0DP23 149 aa12.74□□□□□ -0.37
NME1-201ENST00000013034 CALM2P0DP24 149 aa12.74□□□□□ -0.37
NME1-201ENST00000013034 CALM3P0DP25 149 aa12.74□□□□□ -0.37
NME1-201ENST00000013034 LAG3P18627 525 aa12.74□□□□□ -0.37
NME1-201ENST00000013034 STAT5BP51692 787 aa12.74□□□□□ -0.37
NME1-201ENST00000013034 VCPP55072 806 aaKnown RBP12.74□□□□□ -0.37
NME1-201ENST00000013034 ACTR2P61160 394 aa12.74□□□□□ -0.37
NME1-201ENST00000013034 MTHFD1LQ6UB35 978 aa12.74□□□□□ -0.37
NME1-201ENST00000013034 TEX2Q8IWB9 1127 aa12.74□□□□□ -0.37
NME1-201ENST00000013034 SRBD1Q8N5C6 995 aaKnown RBP12.74□□□□□ -0.37
NME1-201ENST00000013034 COLGALT1Q8NBJ5 622 aa12.74□□□□□ -0.37
NME1-201ENST00000013034 VN1R2Q8NFZ6 395 aa12.74□□□□□ -0.37
NME1-201ENST00000013034 RASGRP4Q8TDF6 673 aa12.74□□□□□ -0.37
NME1-201ENST00000013034 TRAPPC12Q8WVT3 735 aa12.74□□□□□ -0.37
NME1-201ENST00000013034 ERVK-5Q9HDB9 667 aa12.74□□□□□ -0.37
NME1-201ENST00000013034 RGS18Q9NS28 235 aa12.74□□□□□ -0.37
NME1-201ENST00000013034 KCNH7Q9NS40 1196 aa12.74□□□□□ -0.37
NME1-201ENST00000013034 CIZ1Q9ULV3 898 aaPredicted RBP12.74□□□□□ -0.37
NME1-201ENST00000013034 PCDHA6Q9UN73 950 aa12.74□□□□□ -0.37
NME1-201ENST00000013034 PCDHA8Q9Y5H6 950 aa12.74□□□□□ -0.37
NME1-201ENST00000013034 USP34Q70CQ2 3546 aa12.74□□□□□ -0.37
NME1-201ENST00000013034 PLXNA4Q9HCM2 1894 aa12.74□□□□□ -0.37
NME1-201ENST00000013034 COL1A2P08123 1366 aa12.73□□□□□ -0.37
NME1-201ENST00000013034 CCDC69A6NI79 296 aa12.73□□□□□ -0.37
NME1-201ENST00000013034 C9IYK1 514 aa12.73□□□□□ -0.37
NME1-201ENST00000013034 PER2O15055 1255 aa12.73□□□□□ -0.37
NME1-201ENST00000013034 MGEA5O60502 916 aa12.73□□□□□ -0.37
NME1-201ENST00000013034 PPFIA3O75145 1194 aa12.73□□□□□ -0.37
NME1-201ENST00000013034 RPS6KA5O75582 802 aa12.73□□□□□ -0.37
NME1-201ENST00000013034 CHMLP26374 656 aa12.73□□□□□ -0.37
NME1-201ENST00000013034 AVPR2P30518 371 aa12.73□□□□□ -0.37
NME1-201ENST00000013034 MCM2P49736 904 aa12.73□□□□□ -0.37
NME1-201ENST00000013034 NFX1Q12986 1120 aaKnown RBP12.73□□□□□ -0.37
NME1-201ENST00000013034 TMEM266Q2M3C6 531 aa12.73□□□□□ -0.37
NME1-201ENST00000013034 TMEM184AQ6ZMB5 413 aa12.73□□□□□ -0.37
NME1-201ENST00000013034 NFXL1Q6ZNB6 911 aa12.73□□□□□ -0.37
NME1-201ENST00000013034 SLC24A5Q71RS6 500 aa12.73□□□□□ -0.37
NME1-201ENST00000013034 TMTC2Q8N394 836 aa12.73□□□□□ -0.37
NME1-201ENST00000013034 TMEM87BQ96K49 555 aa12.73□□□□□ -0.37
NME1-201ENST00000013034 MXRA8Q9BRK3 442 aa12.73□□□□□ -0.37
NME1-201ENST00000013034 SH2B2O14492 632 aaPredicted RBP12.72□□□□□ -0.37
NME1-201ENST00000013034 GPR182O15218 404 aa12.72□□□□□ -0.37
NME1-201ENST00000013034 SGSM2O43147 1006 aa12.72□□□□□ -0.37
NME1-201ENST00000013034 PRC1O43663 620 aa12.72□□□□□ -0.37
NME1-201ENST00000013034 HBP1O60381 514 aa12.72□□□□□ -0.37
NME1-201ENST00000013034 HOXB8P17481 243 aaPredicted RBP12.72□□□□□ -0.37
NME1-201ENST00000013034 IBSPP21815 317 aaPredicted RBP12.72□□□□□ -0.37
NME1-201ENST00000013034 PPM1AP35813 382 aa12.72□□□□□ -0.37
NME1-201ENST00000013034 RBM10P98175 930 aaKnown RBP12.72□□□□□ -0.37
NME1-201ENST00000013034 PLCB3Q01970 1234 aa12.72□□□□□ -0.37
NME1-201ENST00000013034 KCNC3Q14003 757 aa12.72□□□□□ -0.37
NME1-201ENST00000013034 PLPP4Q5VZY2 271 aa12.72□□□□□ -0.37
NME1-201ENST00000013034 FAM160B1Q5W0V3 765 aa12.72□□□□□ -0.37
NME1-201ENST00000013034 ANKRD54Q6NXT1 300 aa12.72□□□□□ -0.37
NME1-201ENST00000013034 PPP1R18Q6NYC8 613 aa12.72□□□□□ -0.37
NME1-201ENST00000013034 ZBTB33Q86T24 672 aa12.72□□□□□ -0.37
NME1-201ENST00000013034 TMEM40Q8WWA1 233 aa12.72□□□□□ -0.37
NME1-201ENST00000013034 MRPS27Q92552 414 aaKnown RBP12.72□□□□□ -0.37
NME1-201ENST00000013034 ADAM2Q99965 735 aa12.72□□□□□ -0.37
NME1-201ENST00000013034 ESYT1Q9BSJ8 1104 aa12.72□□□□□ -0.37
NME1-201ENST00000013034 ELAC1Q9H777 363 aaKnown RBP12.72□□□□□ -0.37
NME1-201ENST00000013034 ATP6V0A4Q9HBG4 840 aa12.72□□□□□ -0.37
NME1-201ENST00000013034 FAM86C1Q9NVL1 165 aa12.72□□□□□ -0.37
NME1-201ENST00000013034 TMEM161AQ9NX61 479 aa12.72□□□□□ -0.37
NME1-201ENST00000013034 TMEM260Q9NX78 707 aa12.72□□□□□ -0.37
NME1-201ENST00000013034 GINS2Q9Y248 185 aa12.72□□□□□ -0.37
NME1-201ENST00000013034 NOC2LQ9Y3T9 749 aaKnown RBP12.72□□□□□ -0.37
NME1-201ENST00000013034 CACNA1HO95180 2353 aa12.72□□□□□ -0.37
NME1-201ENST00000013034 IGKV6D-21A0A0A0MT36 114 aa12.71□□□□□ -0.37
NME1-201ENST00000013034 HOXA2O43364 376 aa12.71□□□□□ -0.37
NME1-201ENST00000013034 ATG7O95352 703 aa12.71□□□□□ -0.37
NME1-201ENST00000013034 KLRC1P26715 233 aa12.71□□□□□ -0.37
NME1-201ENST00000013034 MCM5P33992 734 aa12.71□□□□□ -0.37
NME1-201ENST00000013034 TECP42680 631 aa12.71□□□□□ -0.37
NME1-201ENST00000013034 ERVFC1P60507 584 aa12.71□□□□□ -0.37
NME1-201ENST00000013034 ITGB3BPQ13352 177 aaPredicted RBP12.71□□□□□ -0.37
NME1-201ENST00000013034 CEP55Q53EZ4 464 aa12.71□□□□□ -0.37
NME1-201ENST00000013034 TMTC3Q6ZXV5 915 aa12.71□□□□□ -0.37
NME1-201ENST00000013034 HEATR3Q7Z4Q2 680 aa12.71□□□□□ -0.37
NME1-201ENST00000013034 CMTR1Q8N1G2 835 aaKnown RBP12.71□□□□□ -0.37
NME1-201ENST00000013034 LRRC43Q8N309 656 aa12.71□□□□□ -0.37
NME1-201ENST00000013034 ATOH1Q92858 354 aaPredicted RBP12.71□□□□□ -0.37
NME1-201ENST00000013034 MAP4K1Q92918 833 aa12.71□□□□□ -0.37
NME1-201ENST00000013034 TCF25Q9BQ70 676 aa12.71□□□□□ -0.37
NME1-201ENST00000013034 S1PR5Q9H228 398 aa12.71□□□□□ -0.37
NME1-201ENST00000013034 CWH43Q9H720 699 aa12.71□□□□□ -0.37
NME1-201ENST00000013034 NGRNQ9NPE2 291 aaKnown RBP12.71□□□□□ -0.37
NME1-201ENST00000013034 ENTPD7Q9NQZ7 604 aa12.71□□□□□ -0.37
NME1-201ENST00000013034 TYW1Q9NV66 732 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms