RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 SCNN1DP51172 638 aa15.29■□□□□ 0.04
USH1C-201ENST00000005226 LRIG3Q6UXM1 1119 aa15.29■□□□□ 0.04
USH1C-201ENST00000005226 ZNF713Q8N859 430 aaPredicted RBP15.29■□□□□ 0.04
USH1C-201ENST00000005226 LNX1Q8TBB1 728 aaPredicted RBP15.29■□□□□ 0.04
USH1C-201ENST00000005226 GLG1Q92896 1179 aa15.29■□□□□ 0.04
USH1C-201ENST00000005226 CCDC114Q96M63 670 aa15.29■□□□□ 0.04
USH1C-201ENST00000005226 ATF5Q9Y2D1 282 aaPredicted RBP15.29■□□□□ 0.04
USH1C-201ENST00000005226 STXBP5LQ9Y2K9 1186 aa15.29■□□□□ 0.04
USH1C-201ENST00000005226 PCDHA1Q9Y5I3 950 aa15.29■□□□□ 0.04
USH1C-201ENST00000005226 IGSF9BQ9UPX0 1349 aa15.29■□□□□ 0.04
USH1C-201ENST00000005226 KDM3AQ9Y4C1 1321 aa15.29■□□□□ 0.04
USH1C-201ENST00000005226 C6orf229H3BNL8 230 aa15.29■□□□□ 0.04
USH1C-201ENST00000005226 TULP1O00294 542 aaPredicted RBP15.29■□□□□ 0.04
USH1C-201ENST00000005226 TRAPPC3O43617 180 aa15.29■□□□□ 0.04
USH1C-201ENST00000005226 BUB1BO60566 1050 aaPredicted RBP15.29■□□□□ 0.04
USH1C-201ENST00000005226 SHBGP04278 402 aa15.29■□□□□ 0.04
USH1C-201ENST00000005226 PPP2R2AP63151 447 aa15.29■□□□□ 0.04
USH1C-201ENST00000005226 QRICH1Q2TAL8 776 aa15.29■□□□□ 0.04
USH1C-201ENST00000005226 EDRF1Q3B7T1 1238 aa15.29■□□□□ 0.04
USH1C-201ENST00000005226 FOXR2Q6PJQ5 311 aa15.29■□□□□ 0.04
USH1C-201ENST00000005226 CCDC121Q6ZUS5 278 aa15.29■□□□□ 0.04
USH1C-201ENST00000005226 TMC3Q7Z5M5 1100 aa15.29■□□□□ 0.04
USH1C-201ENST00000005226 CYP2W1Q8TAV3 490 aa15.29■□□□□ 0.04
USH1C-201ENST00000005226 SEC16BQ96JE7 1060 aa15.29■□□□□ 0.04
USH1C-201ENST00000005226 NCAPGQ9BPX3 1015 aa15.29■□□□□ 0.04
USH1C-201ENST00000005226 ANO3Q9BYT9 981 aa15.29■□□□□ 0.04
USH1C-201ENST00000005226 VCPKMTQ9H867 229 aa15.29■□□□□ 0.04
USH1C-201ENST00000005226 SLC40A1Q9NP59 571 aa15.29■□□□□ 0.04
USH1C-201ENST00000005226 GOLGA6L7A0A1B0GV03 622 aa15.28■□□□□ 0.04
USH1C-201ENST00000005226 GCNT3O95395 438 aa15.28■□□□□ 0.04
USH1C-201ENST00000005226 NR3C1P04150 777 aa15.28■□□□□ 0.04
USH1C-201ENST00000005226 SPATA31C1P0DKV0 1188 aa15.28■□□□□ 0.04
USH1C-201ENST00000005226 PLCG2P16885 1265 aa15.28■□□□□ 0.04
USH1C-201ENST00000005226 GABPAQ06546 454 aa15.28■□□□□ 0.04
USH1C-201ENST00000005226 BYSLQ13895 437 aaKnown RBP15.28■□□□□ 0.04
USH1C-201ENST00000005226 ZC3H3Q8IXZ2 948 aaKnown RBP15.28■□□□□ 0.04
USH1C-201ENST00000005226 GOPCQ9HD26 462 aa15.28■□□□□ 0.04
USH1C-201ENST00000005226 KLC4Q9NSK0 619 aa15.28■□□□□ 0.04
USH1C-201ENST00000005226 CHORDC1Q9UHD1 332 aaPredicted RBP15.28■□□□□ 0.04
USH1C-201ENST00000005226 TNRC6CQ9HCJ0 1690 aaKnown RBP15.28■□□□□ 0.04
USH1C-201ENST00000005226 IGKV6D-41A0A0C4DH26 115 aa15.28■□□□□ 0.04
USH1C-201ENST00000005226 TLDC2A0PJX2 215 aa15.28■□□□□ 0.04
USH1C-201ENST00000005226 ZBTB39O15060 712 aa15.28■□□□□ 0.04
USH1C-201ENST00000005226 FLOT1O75955 427 aa15.28■□□□□ 0.04
USH1C-201ENST00000005226 COG2Q14746 738 aa15.28■□□□□ 0.04
USH1C-201ENST00000005226 ZC2HC1CQ53FD0 456 aaPredicted RBP15.28■□□□□ 0.04
USH1C-201ENST00000005226 FRMD5Q7Z6J6 570 aa15.28■□□□□ 0.04
USH1C-201ENST00000005226 SPATS2Q86XZ4 545 aaKnown RBP15.28■□□□□ 0.04
USH1C-201ENST00000005226 ARFGAP2Q8N6H7 521 aa15.28■□□□□ 0.04
USH1C-201ENST00000005226 CNBD1Q8NA66 436 aa15.28■□□□□ 0.04
USH1C-201ENST00000005226 SLC35C1Q96A29 364 aa15.28■□□□□ 0.04
USH1C-201ENST00000005226 RUSC1Q9BVN2 902 aa15.28■□□□□ 0.04
USH1C-201ENST00000005226 BHMT2Q9H2M3 363 aa15.28■□□□□ 0.04
USH1C-201ENST00000005226 ERVK-5Q9HDB9 667 aa15.28■□□□□ 0.04
USH1C-201ENST00000005226 KCNMB3Q9NPA1 279 aa15.28■□□□□ 0.04
USH1C-201ENST00000005226 SEPT11Q9NVA2 429 aaKnown RBP15.28■□□□□ 0.04
USH1C-201ENST00000005226 RGL1Q9NZL6 768 aa15.28■□□□□ 0.04
USH1C-201ENST00000005226 GGA1Q9UJY5 639 aa15.28■□□□□ 0.04
USH1C-201ENST00000005226 CCNL1Q9UK58 526 aaPredicted RBP15.28■□□□□ 0.04
USH1C-201ENST00000005226 SBF2Q86WG5 1849 aa15.28■□□□□ 0.04
USH1C-201ENST00000005226 CDK5RAP2Q96SN8 1893 aa15.28■□□□□ 0.04
USH1C-201ENST00000005226 BTNL10A8MVZ5 291 aa15.27■□□□□ 0.04
USH1C-201ENST00000005226 IFFO1Q0D2I5 559 aa15.27■□□□□ 0.04
USH1C-201ENST00000005226 DCAF12L1Q5VU92 463 aa15.27■□□□□ 0.04
USH1C-201ENST00000005226 ZFPM1Q8IX07 1006 aa15.27■□□□□ 0.04
USH1C-201ENST00000005226 SLC35G2Q8TBE7 412 aa15.27■□□□□ 0.04
USH1C-201ENST00000005226 RPGRQ92834 1020 aaKnown RBP15.27■□□□□ 0.04
USH1C-201ENST00000005226 PAGR1Q9BTK6 254 aa15.27■□□□□ 0.04
USH1C-201ENST00000005226 HAUS2Q9NVX0 235 aa15.27■□□□□ 0.04
USH1C-201ENST00000005226 TAS2R14Q9NYV8 317 aa15.27■□□□□ 0.04
USH1C-201ENST00000005226 PNMA2Q9UL42 364 aa15.27■□□□□ 0.04
USH1C-201ENST00000005226 ASTN1O14525 1302 aa15.27■□□□□ 0.03
USH1C-201ENST00000005226 FRMD3A2A2Y4 597 aa15.27■□□□□ 0.03
USH1C-201ENST00000005226 F8VZ95 297 aa15.27■□□□□ 0.03
USH1C-201ENST00000005226 CAND2O75155 1236 aa15.27■□□□□ 0.03
USH1C-201ENST00000005226 SHMT1P34896 483 aa15.27■□□□□ 0.03
USH1C-201ENST00000005226 USH1GQ495M9 461 aa15.27■□□□□ 0.03
USH1C-201ENST00000005226 YTHDF3Q7Z739 585 aaKnown RBP15.27■□□□□ 0.03
USH1C-201ENST00000005226 PALB2Q86YC2 1186 aa15.27■□□□□ 0.03
USH1C-201ENST00000005226 C1orf131Q8NDD1 294 aaKnown RBP15.27■□□□□ 0.03
USH1C-201ENST00000005226 PIGOQ8TEQ8 1089 aa15.27■□□□□ 0.03
USH1C-201ENST00000005226 ARHGEF26Q96DR7 871 aa15.27■□□□□ 0.03
USH1C-201ENST00000005226 YY1AP1Q9H869 796 aa15.27■□□□□ 0.03
USH1C-201ENST00000005226 DNM3Q9UQ16 869 aa15.27■□□□□ 0.03
USH1C-201ENST00000005226 TRAF3IP3Q9Y228 551 aa15.27■□□□□ 0.03
USH1C-201ENST00000005226 BHMG1C9JSJ3 638 aaPredicted RBP15.26■□□□□ 0.03
USH1C-201ENST00000005226 EVI5O60447 810 aa15.26■□□□□ 0.03
USH1C-201ENST00000005226 IL1R1P14778 569 aa15.26■□□□□ 0.03
USH1C-201ENST00000005226 GCFC2P16383 781 aaKnown RBP15.26■□□□□ 0.03
USH1C-201ENST00000005226 NMT1P30419 496 aaKnown RBP15.26■□□□□ 0.03
USH1C-201ENST00000005226 CACNB3P54284 484 aa15.26■□□□□ 0.03
USH1C-201ENST00000005226 SPIRE1Q08AE8 756 aa15.26■□□□□ 0.03
USH1C-201ENST00000005226 MKRN4PQ13434 485 aaPredicted RBP15.26■□□□□ 0.03
USH1C-201ENST00000005226 IFI16Q16666 785 aaKnown RBP15.26■□□□□ 0.03
USH1C-201ENST00000005226 C10orf76Q5T2E6 689 aa15.26■□□□□ 0.03
USH1C-201ENST00000005226 RUFY4Q6ZNE9 571 aa15.26■□□□□ 0.03
USH1C-201ENST00000005226 CCDC91Q7Z6B0 441 aa15.26■□□□□ 0.03
USH1C-201ENST00000005226 SLFN11Q7Z7L1 901 aa15.26■□□□□ 0.03
USH1C-201ENST00000005226 USP40Q9NVE5 1235 aa15.26■□□□□ 0.03
USH1C-201ENST00000005226 TMOD4Q9NZQ9 345 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms