RNA–Protein interactions for RNA: ENSMUST00000213114.1

Ldlr-202, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,318 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-202ENSMUST00000213114 TbataQ7TSD4 393 aa10.2□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Phf20l1Q8CCJ9 1013 aa10.2□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Gm3404Q9D506 307 aa10.2□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Tns2Q8CGB6 1400 aa10.2□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Usp17lbE9Q9U0 468 aa10.2□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Art2bO35975 289 aa10.2□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Rasgrf1P27671 1262 aa10.2□□□□□ -0.78
Ldlr-202ENSMUST00000213114 S100bP50114 92 aa10.2□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Miga1Q4QQM5 600 aa10.2□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Spata24Q6P926 205 aa10.2□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Fam133bQ9CVI2 245 aaKnown RBP10.2□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Rnaseh2aQ9CWY8 301 aa10.2□□□□□ -0.78
Ldlr-202ENSMUST00000213114 EcsitQ9QZH6 435 aa10.2□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Rexo5D3YW29 759 aa10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Cyp11b1Q3TG86 501 aa10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Arhgef19Q8BWA8 802 aa10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Amigo3Q8C2S7 508 aa10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Ccdc15Q8C9M2 810 aa10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Sulf1Q8K007 870 aa10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Snx24Q9CRB0 169 aa10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Rilpl1Q9JJC6 406 aa10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Pacsin2Q9WVE8 486 aaKnown RBP10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Eif2ak3Q9Z2B5 1114 aa10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Sucla2Q9Z2I9 463 aa10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Ubr1O70481 1757 aa10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Ift172Q6VH22 1749 aa10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Apol11aE9PZG0 334 aa10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Fam207aP58468 219 aaKnown RBP10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Sv2cQ69ZS6 727 aa10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 PodnQ7TQ62 611 aa10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 P2ry10Q8BFU7 328 aa10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Gpt2Q8BGT5 522 aa10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Trmt2aQ8BNV1 574 aaKnown RBP10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Iqcb1Q8BP00 598 aa10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Ppp1r16bQ8VHQ3 568 aa10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 PdhbQ9D051 359 aa10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Rbm31yQ9D3U4 565 aa10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Mss51Q9D5Z5 446 aa10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Styxl1Q9DAR2 321 aa10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Klra17Q9JMA4 273 aa10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Stk10O55098 966 aa10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Ifnar1P33896 590 aa10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 E2f8Q58FA4 860 aa10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Trim65Q8BFW4 522 aa10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 E330017A01RikQ8BU47 192 aa10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Vps37bQ8R0J7 285 aa10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 YarsQ91WQ3 528 aaKnown RBP10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 PccaQ91ZA3 724 aa10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Golph3Q9CRA5 298 aa10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Hebp1Q9R257 190 aa10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Exoc4O35382 975 aa10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Atf2P16951 487 aaKnown RBP10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Rasip1Q3U0S6 961 aa10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Tatdn3Q3U1C6 294 aa10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Zhx2Q8C0C0 836 aaKnown RBP10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Slc35f6Q8VE96 372 aa10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 CbsQ91WT9 561 aa10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Tor1aip1Q921T2 595 aaKnown RBP10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Plagl2Q925T4 496 aa10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 GrapQ9CX99 217 aa10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 MymkQ9D1N4 221 aa10.19□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Ptpn23Q6PB44 1692 aa10.18□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Kcnk16G5E845 292 aa10.18□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Mgat1P27808 447 aa10.18□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Map3k7clP58500 142 aa10.18□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Sem1P60897 70 aa10.18□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Fam198bQ3UPI1 517 aa10.18□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Gm10392Q3V3I3 114 aa10.18□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Ubn1Q4G0F8 1135 aa10.18□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Cnksr2Q80YA9 1032 aa10.18□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Gm5622Q810Q0 167 aa10.18□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Bpifb6Q8BU51 449 aa10.18□□□□□ -0.78
Ldlr-202ENSMUST00000213114 RadxQ8C779 850 aa10.18□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Vcpip1Q8CDG3 1220 aa10.18□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Kiaa0391Q8JZY4 584 aaKnown RBP10.18□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Kbtbd4Q8R179 534 aa10.18□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Nrbp2Q91V36 499 aa10.18□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Spata17Q9D552 379 aa10.18□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Myo1cQ9WTI7 1063 aa10.18□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Fxr2Q9WVR4 673 aaKnown RBP10.18□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Eya4Q9Z191 616 aa10.18□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Orc1Q9Z1N2 840 aaKnown RBP10.18□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Sipa1l1Q8C0T5 1782 aa10.18□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Zfp984A2A7A2 547 aa10.18□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Serpinb6eI7HJI3 429 aa10.18□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Adam7O35227 789 aa10.18□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Irx1P81068 480 aa10.18□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Gigyf2Q6Y7W8 1291 aaKnown RBP10.18□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Ireb2Q811J3 963 aaKnown RBP10.18□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Snx14Q8BHY8 964 aa10.18□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Trappc12Q8K2L8 797 aa10.18□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Pabpc6Q9D4E6 643 aaKnown RBP10.18□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Usp21Q9QZL6 566 aa10.18□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Pik3r1P26450 724 aa10.18□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Tmod1P49813 359 aa10.18□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Sesn2P58043 480 aa10.18□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Siah1aP61092 282 aa10.18□□□□□ -0.78
Ldlr-202ENSMUST00000213114 Cnot10Q8BH15 744 aa10.18□□□□□ -0.78
Ldlr-202ENSMUST00000213114 TbckQ8BM85 762 aa10.18□□□□□ -0.78
Ldlr-202ENSMUST00000213114 H6pdQ8CFX1 789 aa10.18□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms