RNA–Protein interactions for RNA: ENSMUST00000132214.7

Ccdc38-203, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc38, Length 2,222 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-203ENSMUST00000132214 Gnat1P20612 350 aa7.09□□□□□ -1.27
Ccdc38-203ENSMUST00000132214 Eif4a1P60843 406 aaKnown RBP7.09□□□□□ -1.27
Ccdc38-203ENSMUST00000132214 Frat1P70339 274 aa7.09□□□□□ -1.27
Ccdc38-203ENSMUST00000132214 Arhgap17Q3UIA2 846 aa7.09□□□□□ -1.27
Ccdc38-203ENSMUST00000132214 Ppp1r7Q3UM45 361 aa7.09□□□□□ -1.27
Ccdc38-203ENSMUST00000132214 RilpQ5ND29 369 aa7.09□□□□□ -1.27
Ccdc38-203ENSMUST00000132214 JrkQ60976 557 aa7.09□□□□□ -1.27
Ccdc38-203ENSMUST00000132214 Fgfr1opQ66JX5 399 aa7.09□□□□□ -1.27
Ccdc38-203ENSMUST00000132214 Kcnv1Q8BZN2 503 aa7.09□□□□□ -1.27
Ccdc38-203ENSMUST00000132214 Agbl2Q8CDK2 862 aa7.09□□□□□ -1.27
Ccdc38-203ENSMUST00000132214 Ccdc28bQ8CEG5 200 aa7.09□□□□□ -1.27
Ccdc38-203ENSMUST00000132214 Q8CEZ4 452 aa7.09□□□□□ -1.27
Ccdc38-203ENSMUST00000132214 Brd8Q8R3B7 951 aa7.09□□□□□ -1.27
Ccdc38-203ENSMUST00000132214 Ttyh1Q9D3A9 450 aa7.09□□□□□ -1.27
Ccdc38-203ENSMUST00000132214 RabggtaQ9JHK4 567 aa7.09□□□□□ -1.27
Ccdc38-203ENSMUST00000132214 Twf2Q9Z0P5 349 aaKnown RBP7.09□□□□□ -1.27
Ccdc38-203ENSMUST00000132214 Disp3A3KFU9 1347 aa7.09□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Aox2Q5SGK3 1345 aa7.09□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Abcc12Q80WJ6 1366 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Tbc1d2B1AVH7 922 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Ebf2O08792 575 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Clk4O35493 481 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Slc27a3O88561 667 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Enpp1P06802 906 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 VimP20152 466 aaKnown RBP7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Tubb5P99024 444 aaKnown RBP7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Ccdc160Q3UYG1 323 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 HrQ61645 1182 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Tmcc1Q69ZZ6 649 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Ccdc57Q6PHN1 1016 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 NostrinQ6WKZ7 506 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Stambpl1Q76N33 436 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Cdca8Q8BHX3 289 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Ubr7Q8BU04 425 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Atg14Q8CDJ3 492 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Ccdc17Q8CE13 565 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 GptQ8QZR5 496 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Mrpl50Q8VDT9 159 aaKnown RBP7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Zbtb3Q91X45 518 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Xrcc4Q924T3 326 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Tlcd1Q99JT6 247 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 BrapQ99MP8 591 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Glrx3Q9CQM9 337 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Akap8Q9DBR0 687 aaKnown RBP7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Mgea5Q9EQQ9 916 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Elf2Q9JHC9 593 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 SynrgQ5SV85 1306 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Exoc3l2D3YUP5 789 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Jakmip2D3YXK0 820 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Zscan18E9PUD6 809 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Cfap73J3QPZ5 306 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Gnai2P08752 355 aaKnown RBP7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Cbx3P23198 183 aaKnown RBP7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Cyp2d11P24457 504 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Sox1P53783 391 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Usp5P56399 858 aaKnown RBP7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 FerP70451 823 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Smarcc1P97496 1104 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Naf1Q3UMQ8 489 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 PsapQ61207 557 aaKnown RBP7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Hsph1Q61699 858 aaKnown RBP7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Zfp438Q8BFX2 798 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Pnma2Q8BHK0 365 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Camkk2Q8C078 588 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Stbd1Q8C7E7 338 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Trim52Q8CDV4 233 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Krtcap3Q8K177 240 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 FktnQ8R507 461 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Camk2gQ923T9 529 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Lonrf3Q9D4H7 753 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Cfap45Q9D9U9 551 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Ift43Q9DA69 206 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Vmn1r47Q9EQ51 310 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Magi2Q9WVQ1 1275 aa7.08□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Gm4307E9PZY4 289 aa7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Zfp607bG3X9H3 648 aa7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Mfsd4b4J3QNS5 503 aa7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Gfra2O08842 464 aa7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Exoc4O35382 975 aa7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Dync1i2O88487 612 aaKnown RBP7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 GnaqP21279 359 aa7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 AcrP23578 436 aa7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Ppfia3P60469 1194 aa7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Znhit6Q3UFB2 460 aaKnown RBP7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Ag2Q3UPL5 249 aa7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Slf2Q6P9P0 1278 aa7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Fbxo10Q7TQF2 950 aa7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Suz12Q80U70 741 aaKnown RBP7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Oscp1Q8BHW2 379 aa7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Ttc39cQ8VE09 580 aa7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Zmat2Q9CPW7 199 aa7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Cdca5Q9CPY3 264 aa7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Fam32aQ9CR80 112 aaKnown RBP7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Tmem53Q9D0Z3 276 aa7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Cul5Q9D5V5 780 aa7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Clec3aQ9EPW4 196 aa7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Ndufa13Q9ERS2 144 aa7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Trpc4apQ9JLV2 797 aa7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 St6galnac1Q9QZ39 526 aa7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Nek4Q9Z1J2 792 aa7.07□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 43.7 ms